| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471611
Identifier: 13471611
GI number: 13471611
Start: 1358427
End: 1359299
Strand: Reverse
Name: 13471611
Synonym: mll1636
Alternate gene names: NA
Gene position: 1359299-1358427 (Counterclockwise)
Preceding gene: 13471614
Following gene: 13471609
Centisome position: 19.32
GC content: 65.75
Gene sequence:
>873_bases ATGGACGCTCCCTCCCATTCCGCTGAAGACAGCCGCCGGCGCGAACTCGGGGCTTTCCTGCGTTCGCGCCGTGAAAGGCT GACGCCCTCGGCGACCGGCATCTCGACCGGTCTCAGGCGCCGCACGCCGGGCCTGCGTCGCGAAGAGGTGGCGATGATCG CTGGTGTCGGCACCACCTGGTACACCTGGCTGGAACAGGGCAGGGATGTGCGCCCTTCGGTGGAGGTGCTGACGGCGCTC AGCGGCGCGCTGCGCTTGGACGCTGCAGAGAAGCGGCATCTGTTCACGCTCGCTGGCCGCCAGCTGCCGGAGCGGCGGCG CATCGCGGCGGGAAAGGTCGAAGGCCCCTTGCTGCATATGCTGCAAAGCCTTGTCCTGCAGCCCGCCTATGTCGTCGGTC CGCGCTGGGATGTGCTGGCCTGGAACGATGCGGCGGTTGCCATTTTCGGCGATTACGGCCAGCTCGAAGGTGACGCCCGC AACATCATCCACGGCGTGTTCACCGATCCGCACCGGCGGCATTTGCTGGCGGACTGGGAACAAGTGGCGCGCGCAACCCT TGCCGCGTTTCGCGCTGAGAGCGCCAGATATGTCGGCGATCCGGATTTCGAACGGCTGATCGCGCTGATGATGCGCTCAA GTCCCGAATTCCGGGAATGGTGGCCGCAGCGCGATGTCGTGCATCGCCTGTCGGGCATGAAACATCTGCGCCATCCGACC GCCGGCGCGATGGTGTTCGAGCATATGAGCCTGTCGATCGATGACGGCTCGGACATGAAGCTGATCGTCTACACGCCGCT CGCCGAACAGAACTCGATCGCCAAGCTGCAATCCTTGCTGGACGCGATGCCGGCCGAGCGGCGTAGCGCCTGA
Upstream 100 bases:
>100_bases AGAGCCTCCTGTCTGCTGCTCCAGATGCAAGATGGGACGTCTGGCCGATCTCAAACAGTTCAAACTTTATCCTGGTATCA ATACTGCTATAATAAGCGTC
Downstream 100 bases:
>100_bases GCCGTCGTGGGCGGGGGGTCAGCCCCTCGGCTTCAGCCCCTCAAGAAACAATTGCTCCAAGAATCTTGCCGCGTCCTCGA AGCGGCCGTCGCCGCCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; XRE Family Transcription Regulator Protein; Helix-Turn-Helix Domain Containing Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDAPSHSAEDSRRRELGAFLRSRRERLTPSATGISTGLRRRTPGLRREEVAMIAGVGTTWYTWLEQGRDVRPSVEVLTAL SGALRLDAAEKRHLFTLAGRQLPERRRIAAGKVEGPLLHMLQSLVLQPAYVVGPRWDVLAWNDAAVAIFGDYGQLEGDAR NIIHGVFTDPHRRHLLADWEQVARATLAAFRAESARYVGDPDFERLIALMMRSSPEFREWWPQRDVVHRLSGMKHLRHPT AGAMVFEHMSLSIDDGSDMKLIVYTPLAEQNSIAKLQSLLDAMPAERRSA
Sequences:
>Translated_290_residues MDAPSHSAEDSRRRELGAFLRSRRERLTPSATGISTGLRRRTPGLRREEVAMIAGVGTTWYTWLEQGRDVRPSVEVLTAL SGALRLDAAEKRHLFTLAGRQLPERRRIAAGKVEGPLLHMLQSLVLQPAYVVGPRWDVLAWNDAAVAIFGDYGQLEGDAR NIIHGVFTDPHRRHLLADWEQVARATLAAFRAESARYVGDPDFERLIALMMRSSPEFREWWPQRDVVHRLSGMKHLRHPT AGAMVFEHMSLSIDDGSDMKLIVYTPLAEQNSIAKLQSLLDAMPAERRSA >Mature_290_residues MDAPSHSAEDSRRRELGAFLRSRRERLTPSATGISTGLRRRTPGLRREEVAMIAGVGTTWYTWLEQGRDVRPSVEVLTAL SGALRLDAAEKRHLFTLAGRQLPERRRIAAGKVEGPLLHMLQSLVLQPAYVVGPRWDVLAWNDAAVAIFGDYGQLEGDAR NIIHGVFTDPHRRHLLADWEQVARATLAAFRAESARYVGDPDFERLIALMMRSSPEFREWWPQRDVVHRLSGMKHLRHPT AGAMVFEHMSLSIDDGSDMKLIVYTPLAEQNSIAKLQSLLDAMPAERRSA
Specific function: Unknown
COG id: COG1396
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32645; Mature: 32645
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAPSHSAEDSRRRELGAFLRSRRERLTPSATGISTGLRRRTPGLRREEVAMIAGVGTTW CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH YTWLEQGRDVRPSVEVLTALSGALRLDAAEKRHLFTLAGRQLPERRRIAAGKVEGPLLHM HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LQSLVLQPAYVVGPRWDVLAWNDAAVAIFGDYGQLEGDARNIIHGVFTDPHRRHLLADWE HHHHHHCCCEEECCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHH QVARATLAAFRAESARYVGDPDFERLIALMMRSSPEFREWWPQRDVVHRLSGMKHLRHPT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC AGAMVFEHMSLSIDDGSDMKLIVYTPLAEQNSIAKLQSLLDAMPAERRSA HHHHHHHHHEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MDAPSHSAEDSRRRELGAFLRSRRERLTPSATGISTGLRRRTPGLRREEVAMIAGVGTTW CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHH YTWLEQGRDVRPSVEVLTALSGALRLDAAEKRHLFTLAGRQLPERRRIAAGKVEGPLLHM HHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHH LQSLVLQPAYVVGPRWDVLAWNDAAVAIFGDYGQLEGDARNIIHGVFTDPHRRHLLADWE HHHHHHCCCEEECCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHH QVARATLAAFRAESARYVGDPDFERLIALMMRSSPEFREWWPQRDVVHRLSGMKHLRHPT HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCC AGAMVFEHMSLSIDDGSDMKLIVYTPLAEQNSIAKLQSLLDAMPAERRSA HHHHHHHHHEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA