| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471537
Identifier: 13471537
GI number: 13471537
Start: 1278622
End: 1279311
Strand: Reverse
Name: 13471537
Synonym: mll1538
Alternate gene names: NA
Gene position: 1279311-1278622 (Counterclockwise)
Preceding gene: 13471538
Following gene: 13471536
Centisome position: 18.18
GC content: 62.9
Gene sequence:
>690_bases GTGATGGCGTTCAAAGGCTTCGGCCCAAAGGCCATTCCGTTCCTGAAGGCGCTGGATTTCCACCAGAGCCGGGAGTGGTT TTTGGAGAATCGCGACCTGTTCGAACAGGAACTGCGCGATCCTCTTGGCGATCTCGTCGACACGCTGACACAGCGCTTTG CAGAGGCAGGGCTCGGTTTGCGCGGTGACCGCAAGAAGTCGCTGTTCCGCATCAATCGCGACGTGCGTTTCGCCAAGGAC AAGCGGCCGTACAACCGGCATGTCTCGGCGATCCTGTCTCCCGACGGCAGCAAGGCCGTGCAGGGCGTGTTCTACATCCA TATCGGGCTTGAGGGCTGCTTTGCCGGCGTCGCCTGGTGGCAGCCGGAGGCAGCGCTGCTGCTGGCGATGCGGCGCGCCA TCGAGACGTGGCCCGACAGGTTTCGCGCCATGGTGAAGGCGCTGAAGAAGAACGGCCTCGAGCTTAGCGCCGAAGACGCC ATGAAACGCACGCCGCGGGGCTTCGAGCACGTCACGGACAAGGATCTTGTCGCCGCGATCCGCAACCGGCATTTTGCCGT CCGCCATGTCGTTGATCCGGCCGGCATTCACGGGCCGGAACTGGTCGAGGAACTCGTCGATTTCACCATGCGCGCCAAGC CGCTGCTCGACTGGGGCAGGGCGATCGAGGGTAGAATCGCAAAGGACTGA
Upstream 100 bases:
>100_bases TGGTCGCCGGACCCGGCGCCGGCTCCAAGCTCAAGCTTGCCAGCGAACTCGGCGTCGAAGTCATCGACGAGGACACCTGG CTGCAACGGGTCGGCAAGGC
Downstream 100 bases:
>100_bases GTTCCATCTCGAACCCGGCGACGATCATTTCCGCTGATCGTTTGGCTCAAGCGAATTCGTGTGACAAGGCGGGCTGCACT ACCTACATCGACGGTTTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MMAFKGFGPKAIPFLKALDFHQSREWFLENRDLFEQELRDPLGDLVDTLTQRFAEAGLGLRGDRKKSLFRINRDVRFAKD KRPYNRHVSAILSPDGSKAVQGVFYIHIGLEGCFAGVAWWQPEAALLLAMRRAIETWPDRFRAMVKALKKNGLELSAEDA MKRTPRGFEHVTDKDLVAAIRNRHFAVRHVVDPAGIHGPELVEELVDFTMRAKPLLDWGRAIEGRIAKD
Sequences:
>Translated_229_residues MMAFKGFGPKAIPFLKALDFHQSREWFLENRDLFEQELRDPLGDLVDTLTQRFAEAGLGLRGDRKKSLFRINRDVRFAKD KRPYNRHVSAILSPDGSKAVQGVFYIHIGLEGCFAGVAWWQPEAALLLAMRRAIETWPDRFRAMVKALKKNGLELSAEDA MKRTPRGFEHVTDKDLVAAIRNRHFAVRHVVDPAGIHGPELVEELVDFTMRAKPLLDWGRAIEGRIAKD >Mature_229_residues MMAFKGFGPKAIPFLKALDFHQSREWFLENRDLFEQELRDPLGDLVDTLTQRFAEAGLGLRGDRKKSLFRINRDVRFAKD KRPYNRHVSAILSPDGSKAVQGVFYIHIGLEGCFAGVAWWQPEAALLLAMRRAIETWPDRFRAMVKALKKNGLELSAEDA MKRTPRGFEHVTDKDLVAAIRNRHFAVRHVVDPAGIHGPELVEELVDFTMRAKPLLDWGRAIEGRIAKD
Specific function: Unknown
COG id: COG5587
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26133; Mature: 26133
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAFKGFGPKAIPFLKALDFHQSREWFLENRDLFEQELRDPLGDLVDTLTQRFAEAGLGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGDRKKSLFRINRDVRFAKDKRPYNRHVSAILSPDGSKAVQGVFYIHIGLEGCFAGVAWW CCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCHHHHCEEEEEEEEHHHHHHHHHHC QPEAALLLAMRRAIETWPDRFRAMVKALKKNGLELSAEDAMKRTPRGFEHVTDKDLVAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHH RNRHFAVRHVVDPAGIHGPELVEELVDFTMRAKPLLDWGRAIEGRIAKD HHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMAFKGFGPKAIPFLKALDFHQSREWFLENRDLFEQELRDPLGDLVDTLTQRFAEAGLGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RGDRKKSLFRINRDVRFAKDKRPYNRHVSAILSPDGSKAVQGVFYIHIGLEGCFAGVAWW CCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCCCCHHHHCEEEEEEEEHHHHHHHHHHC QPEAALLLAMRRAIETWPDRFRAMVKALKKNGLELSAEDAMKRTPRGFEHVTDKDLVAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHCCHHHHHHHH RNRHFAVRHVVDPAGIHGPELVEELVDFTMRAKPLLDWGRAIEGRIAKD HHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA