| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is nqo3 [H]
Identifier: 13471400
GI number: 13471400
Start: 1139294
End: 1141375
Strand: Reverse
Name: nqo3 [H]
Synonym: mll1362
Alternate gene names: 13471400
Gene position: 1141375-1139294 (Counterclockwise)
Preceding gene: 13471401
Following gene: 13471399
Centisome position: 16.22
GC content: 65.18
Gene sequence:
>2082_bases ATGGCAAAGCTCAAGGTCGACGGGAAAGAGATCACTGTACCCGACCACTACACGCTGCTGCAGGCGGCGGAAGACGCGGG CGCGGAAGTGCCGCGCTTCTGCTTCCATGAGCGGCTGTCGATCGCCGGCAATTGCCGCATGTGCCTGATCGAGGTGAAGG GCGGGCCGCCCAAGCCGCAGGCCTCCTGCGCCATGGGCGTGCGCGATTTGCGCCCCGGCCCCAATGGCGAGCCGCCGGAA ATCTTCACCAACACGCCGATGGTCAAGAAGGCCCGGGAAGGCGTGATGGAGTTCCTGCTGATCAACCATCCGCTGGATTG CCCGATCTGCGACCAGGGCGGCGAGTGCGACCTGCAGGACCAGGCGATGGCCTTCGGCGTCGATTCCTCGCGCTATCACG AGAACAAGCGGGCGGTCGAAGACAAGTATATCGGCCCGCTGGTCAAGACGGTGATGAACCGCTGCATCCATTGCACGCGC TGCGTCCGCTTCACCACGGAAGTCGCCGGCATTTCCGAACTCGGCCTGATCGGCCGTGGCGAGGATGCGGAGATCACCAC CTATCTCGAACAGGCGATGACCTCGGAATTGCAGGGCAATGTCATCGATCTCTGCCCAGTCGGCGCGCTGACCTCCAAAC CCTTCGCCTTCCAGGCGCGGCCGTGGGAACTGACCAAGACCGAATCCATCGACGTCATGGACGCCGTCGGCTCGGCGATC CGCATCGACAGCCGTGGCCGCGAAGTGATGCGCATCCTGCCGCGCGTCAACGAGCAGGTGAACGAGGAGTGGATTTCCGA CAAGACCCGCTTCATCTGGGACGGGTTGCGCACGCAGCGCCTCGACCGTCCCTATGTGCGCAAGGACGGCAGGCTGGTTG CGGCAAGCTGGGCCGAAGCGTTCGCGACAATCAAGGACGCGGTGTCGAAGACGACGCCAGAGAAGATCGGTGCCATTGCC GGAGATCTCGCGGCTGTCGAGGAAATCTATGCGCTCAAGTTGCTGATGGCTTCGCTCGGCTCCAAGAATGTCGATTGCCG CCAGGATGGCGCCGCACTCGATCCGGAGCTTGGACGCGCCAGCTACATCTTCAACCCGACCATCGAAGGTATCGAGCAGG CCGACGCGGTGCTGATCATTGGCGCCAATCCGCGTTTCGAAGCCTCGGTGCTCAACGCCCGCATCCGTAAGCGCTGGCGG GTCGGCAACCTGCCGGTCGGCGTCATCGGCGATGTCGGCGACACGCGCTACGAATATGAATTGCTCGGCGCCGGGCCGGA TTCGCTCAAGGATCTGGCCGACGGCAACGGCAAGTTCTTCCAGACGCTGAAGAAGGCGACGCATCCGCTGATCATCGTCG GCCAGGGCGCGCTGGCGCGCGCCGACGGCGCGGCCGTGCTCGGCCAGGCGGCGAAGCTCGCCACTGCCGTGAATGCCGCC CGCGCCGACTGGAACGGCTTTGCCGTGCTGCACAATGCGGCGGCCAGGGTCGGCGGCCTCGATCTCGGTTTCGTGCCGGG CGAGGGCGGCAAGGATGTCGCCGGCATGCTGGGCGAAACGGACGTGCTGTTCCTGCTCGGCGCCGACGAGATCGACATGG GCAAGACCGGCGGTGCCTTCGTCGTCTACATCGGCACGCATGGCGACCACGGCGCGCATCGCGCCAATGTCATCCTGCCG GCAGCTGCCTACACGGAAAAGTCGGGCACCTACGTCAACACCGAAGGGCGCGTGCAGCAGACCAACCGCGCCGGCTTCGC CCCGGGCGACGCGCGCGAGGACTGGGCGATTCTGCGGGCCCTGTCCGACGTGCTGGGCAAGAAACTGCCATTCGATTCGC TGCCGCAACTGCGCGCCAAACTCTATGGCGAGTACCCGCATCTGGCCCGCATCGATCAGGTCGCGGCCGGCAATGCCGAG GACATCGCCGGCGTGGCGAAGCTCGGTGGGCGGCTGAACAAAGGCACCTTCACCTCCCCGGTCAAGGATTTCTATCTGAC CAACCCGATCGCGCGGGCATCGGCCGTGATGGCGGAATGCTCGGCACTGGCCAAGAGCGGCTTCAAGCAGGCGGCGGAAT AA
Upstream 100 bases:
>100_bases GCGGCTGTGCTGGCCGCGAAGAAGTGAATGAAATGCCGGGTGCCGCGTCTGTCGCGCCCGGGAAATGAGATTGCGGGAAA TCCGCAGGGGTTTGAAGCGA
Downstream 100 bases:
>100_bases GCATGGACACCTTCTTCTCCTTCTACGTGCTGCCGGCGCTGCTGATCCTTCTGAAGTCGGTCGTGCTGATCGTGGTGCTG CTGATCTTCGTGGCCTACAT
Product: NADH dehydrogenase subunit G
Products: NA
Alternate protein names: NADH dehydrogenase I, chain 3; NDH-1, chain 3 [H]
Number of amino acids: Translated: 693; Mature: 692
Protein sequence:
>693_residues MAKLKVDGKEITVPDHYTLLQAAEDAGAEVPRFCFHERLSIAGNCRMCLIEVKGGPPKPQASCAMGVRDLRPGPNGEPPE IFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAFGVDSSRYHENKRAVEDKYIGPLVKTVMNRCIHCTR CVRFTTEVAGISELGLIGRGEDAEITTYLEQAMTSELQGNVIDLCPVGALTSKPFAFQARPWELTKTESIDVMDAVGSAI RIDSRGREVMRILPRVNEQVNEEWISDKTRFIWDGLRTQRLDRPYVRKDGRLVAASWAEAFATIKDAVSKTTPEKIGAIA GDLAAVEEIYALKLLMASLGSKNVDCRQDGAALDPELGRASYIFNPTIEGIEQADAVLIIGANPRFEASVLNARIRKRWR VGNLPVGVIGDVGDTRYEYELLGAGPDSLKDLADGNGKFFQTLKKATHPLIIVGQGALARADGAAVLGQAAKLATAVNAA RADWNGFAVLHNAAARVGGLDLGFVPGEGGKDVAGMLGETDVLFLLGADEIDMGKTGGAFVVYIGTHGDHGAHRANVILP AAAYTEKSGTYVNTEGRVQQTNRAGFAPGDAREDWAILRALSDVLGKKLPFDSLPQLRAKLYGEYPHLARIDQVAAGNAE DIAGVAKLGGRLNKGTFTSPVKDFYLTNPIARASAVMAECSALAKSGFKQAAE
Sequences:
>Translated_693_residues MAKLKVDGKEITVPDHYTLLQAAEDAGAEVPRFCFHERLSIAGNCRMCLIEVKGGPPKPQASCAMGVRDLRPGPNGEPPE IFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAFGVDSSRYHENKRAVEDKYIGPLVKTVMNRCIHCTR CVRFTTEVAGISELGLIGRGEDAEITTYLEQAMTSELQGNVIDLCPVGALTSKPFAFQARPWELTKTESIDVMDAVGSAI RIDSRGREVMRILPRVNEQVNEEWISDKTRFIWDGLRTQRLDRPYVRKDGRLVAASWAEAFATIKDAVSKTTPEKIGAIA GDLAAVEEIYALKLLMASLGSKNVDCRQDGAALDPELGRASYIFNPTIEGIEQADAVLIIGANPRFEASVLNARIRKRWR VGNLPVGVIGDVGDTRYEYELLGAGPDSLKDLADGNGKFFQTLKKATHPLIIVGQGALARADGAAVLGQAAKLATAVNAA RADWNGFAVLHNAAARVGGLDLGFVPGEGGKDVAGMLGETDVLFLLGADEIDMGKTGGAFVVYIGTHGDHGAHRANVILP AAAYTEKSGTYVNTEGRVQQTNRAGFAPGDAREDWAILRALSDVLGKKLPFDSLPQLRAKLYGEYPHLARIDQVAAGNAE DIAGVAKLGGRLNKGTFTSPVKDFYLTNPIARASAVMAECSALAKSGFKQAAE >Mature_692_residues AKLKVDGKEITVPDHYTLLQAAEDAGAEVPRFCFHERLSIAGNCRMCLIEVKGGPPKPQASCAMGVRDLRPGPNGEPPEI FTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQDQAMAFGVDSSRYHENKRAVEDKYIGPLVKTVMNRCIHCTRC VRFTTEVAGISELGLIGRGEDAEITTYLEQAMTSELQGNVIDLCPVGALTSKPFAFQARPWELTKTESIDVMDAVGSAIR IDSRGREVMRILPRVNEQVNEEWISDKTRFIWDGLRTQRLDRPYVRKDGRLVAASWAEAFATIKDAVSKTTPEKIGAIAG DLAAVEEIYALKLLMASLGSKNVDCRQDGAALDPELGRASYIFNPTIEGIEQADAVLIIGANPRFEASVLNARIRKRWRV GNLPVGVIGDVGDTRYEYELLGAGPDSLKDLADGNGKFFQTLKKATHPLIIVGQGALARADGAAVLGQAAKLATAVNAAR ADWNGFAVLHNAAARVGGLDLGFVPGEGGKDVAGMLGETDVLFLLGADEIDMGKTGGAFVVYIGTHGDHGAHRANVILPA AAYTEKSGTYVNTEGRVQQTNRAGFAPGDAREDWAILRALSDVLGKKLPFDSLPQLRAKLYGEYPHLARIDQVAAGNAED IAGVAKLGGRLNKGTFTSPVKDFYLTNPIARASAVMAECSALAKSGFKQAAE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1034
COG function: function code C; NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI33519475, Length=709, Percent_Identity=50.2115655853314, Blast_Score=671, Evalue=0.0, Organism=Escherichia coli, GI145693161, Length=708, Percent_Identity=26.1299435028249, Blast_Score=201, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17565758, Length=694, Percent_Identity=48.9913544668588, Blast_Score=615, Evalue=1e-176, Organism=Caenorhabditis elegans, GI32566231, Length=590, Percent_Identity=50.8474576271186, Blast_Score=559, Evalue=1e-159, Organism=Caenorhabditis elegans, GI193209088, Length=256, Percent_Identity=60.15625, Blast_Score=318, Evalue=9e-87, Organism=Drosophila melanogaster, GI24640559, Length=684, Percent_Identity=50.2923976608187, Blast_Score=629, Evalue=1e-180, Organism=Drosophila melanogaster, GI24640557, Length=684, Percent_Identity=50.2923976608187, Blast_Score=629, Evalue=1e-180,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR001041 - InterPro: IPR006656 - InterPro: IPR000283 - InterPro: IPR010228 - InterPro: IPR019574 - InterPro: IPR015405 [H]
Pfam domain/function: PF09326 DUF1982; PF00111 Fer2; PF00384 Molybdopterin; PF10588 NADH-G_4Fe-4S_3 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 74546; Mature: 74415
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00642 COMPLEX1_75K_2 ; PS00643 COMPLEX1_75K_3 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLKVDGKEITVPDHYTLLQAAEDAGAEVPRFCFHERLSIAGNCRMCLIEVKGGPPKPQ CCEEEECCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCC ASCAMGVRDLRPGPNGEPPEIFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQD HHHHHCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAMAFGVDSSRYHENKRAVEDKYIGPLVKTVMNRCIHCTRCVRFTTEVAGISELGLIGRG CHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC EDAEITTYLEQAMTSELQGNVIDLCPVGALTSKPFAFQARPWELTKTESIDVMDAVGSAI CCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCEE RIDSRGREVMRILPRVNEQVNEEWISDKTRFIWDGLRTQRLDRPYVRKDGRLVAASWAEA EECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHH FATIKDAVSKTTPEKIGAIAGDLAAVEEIYALKLLMASLGSKNVDCRQDGAALDPELGRA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE SYIFNPTIEGIEQADAVLIIGANPRFEASVLNARIRKRWRVGNLPVGVIGDVGDTRYEYE EEEECCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE LLGAGPDSLKDLADGNGKFFQTLKKATHPLIIVGQGALARADGAAVLGQAAKLATAVNAA EECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH RADWNGFAVLHNAAARVGGLDLGFVPGEGGKDVAGMLGETDVLFLLGADEIDMGKTGGAF HCCCCCEEHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEE VVYIGTHGDHGAHRANVILPAAAYTEKSGTYVNTEGRVQQTNRAGFAPGDAREDWAILRA EEEEECCCCCCCCCCCEEEEEHHEECCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHH LSDVLGKKLPFDSLPQLRAKLYGEYPHLARIDQVAAGNAEDIAGVAKLGGRLNKGTFTSP HHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC VKDFYLTNPIARASAVMAECSALAKSGFKQAAE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKLKVDGKEITVPDHYTLLQAAEDAGAEVPRFCFHERLSIAGNCRMCLIEVKGGPPKPQ CEEEECCCEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCC ASCAMGVRDLRPGPNGEPPEIFTNTPMVKKAREGVMEFLLINHPLDCPICDQGGECDLQD HHHHHCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QAMAFGVDSSRYHENKRAVEDKYIGPLVKTVMNRCIHCTRCVRFTTEVAGISELGLIGRG CHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC EDAEITTYLEQAMTSELQGNVIDLCPVGALTSKPFAFQARPWELTKTESIDVMDAVGSAI CCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCEE RIDSRGREVMRILPRVNEQVNEEWISDKTRFIWDGLRTQRLDRPYVRKDGRLVAASWAEA EECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHH FATIKDAVSKTTPEKIGAIAGDLAAVEEIYALKLLMASLGSKNVDCRQDGAALDPELGRA HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCE SYIFNPTIEGIEQADAVLIIGANPRFEASVLNARIRKRWRVGNLPVGVIGDVGDTRYEYE EEEECCCHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEE LLGAGPDSLKDLADGNGKFFQTLKKATHPLIIVGQGALARADGAAVLGQAAKLATAVNAA EECCCHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH RADWNGFAVLHNAAARVGGLDLGFVPGEGGKDVAGMLGETDVLFLLGADEIDMGKTGGAF HCCCCCEEHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCEE VVYIGTHGDHGAHRANVILPAAAYTEKSGTYVNTEGRVQQTNRAGFAPGDAREDWAILRA EEEEECCCCCCCCCCCEEEEEHHEECCCCCEECCCCCEEECCCCCCCCCCCCHHHHHHHH LSDVLGKKLPFDSLPQLRAKLYGEYPHLARIDQVAAGNAEDIAGVAKLGGRLNKGTFTSP HHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC VKDFYLTNPIARASAVMAECSALAKSGFKQAAE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1605643; 8422400 [H]