Click here to switch to the map view.

The map label for this gene is 13471388

Identifier: 13471388

GI number: 13471388

Start: 1127503

End: 1127787

Strand: Reverse

Name: 13471388

Synonym: msl1345

Alternate gene names: NA

Gene position: 1127787-1127503 (Counterclockwise)

Preceding gene: 13471389

Following gene: 13471387

Centisome position: 16.03

GC content: 63.51

Gene sequence:

>285_bases
ATGAGCTGGGTTTCGTTCACCGCCCTGTTTTTCGCGACCTGGTGGGTGGTGCTGTTCGCCGTGCTGCCGTTCAGCGTTAG
GACGCAGGACGACGATCATGACGTGACGCTGGGCACGGTTCCAAGCGCGCCGCGCGGGCCGCATATGCTGCGCGCGGTGA
TCCGCACCACCATCGCCACGGCGATCCTCATGGGCATTTTCTATGGGCTGACGCACGGGCTCGGCTACAGCCTCAACGAC
ATCCCGCATATCGTGCCGGATTTCGGCCAGACCCCGGCGAAATAG

Upstream 100 bases:

>100_bases
TGCTGGGCGACGGCAATCCGAGAACCGGCGCGCATGGCAAGCCGGTGCTGTTCCTGCATCCGAAGGATTTCTTCGGCACG
CTGATCGAACTGGAGCAATC

Downstream 100 bases:

>100_bases
ATCGGCCGCCAAGGGTACTCTTACAGTATTGGTAAGCTGCGGACGGGGTTTGAGACGCCGCCGTGCTCCGCAGTCGCATG
CCTGCTGACGCCGCGTCATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSWVSFTALFFATWWVVLFAVLPFSVRTQDDDHDVTLGTVPSAPRGPHMLRAVIRTTIATAILMGIFYGLTHGLGYSLND
IPHIVPDFGQTPAK

Sequences:

>Translated_94_residues
MSWVSFTALFFATWWVVLFAVLPFSVRTQDDDHDVTLGTVPSAPRGPHMLRAVIRTTIATAILMGIFYGLTHGLGYSLND
IPHIVPDFGQTPAK
>Mature_93_residues
SWVSFTALFFATWWVVLFAVLPFSVRTQDDDHDVTLGTVPSAPRGPHMLRAVIRTTIATAILMGIFYGLTHGLGYSLNDI
PHIVPDFGQTPAK

Specific function: Unknown

COG id: COG5454

COG function: function code S; Predicted secreted protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10373; Mature: 10242

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWVSFTALFFATWWVVLFAVLPFSVRTQDDDHDVTLGTVPSAPRGPHMLRAVIRTTIAT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
AILMGIFYGLTHGLGYSLNDIPHIVPDFGQTPAK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SWVSFTALFFATWWVVLFAVLPFSVRTQDDDHDVTLGTVPSAPRGPHMLRAVIRTTIAT
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
AILMGIFYGLTHGLGYSLNDIPHIVPDFGQTPAK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA