| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471356
Identifier: 13471356
GI number: 13471356
Start: 1096208
End: 1096759
Strand: Reverse
Name: 13471356
Synonym: mll1302
Alternate gene names: NA
Gene position: 1096759-1096208 (Counterclockwise)
Preceding gene: 13471357
Following gene: 13471351
Centisome position: 15.59
GC content: 65.22
Gene sequence:
>552_bases ATGGGCGACGCGGCGCGAGGATCGACAAAAAGGTTCAAAACAATGATCCATGTCTGCTCATTGGCGAAGATCGAGGAAAC GGTGGCCAGGACCGGCGCCGACCGCATGCTGTCGCTGCTCTCCATCGGAACCGAGGTGACGCGTCCGGCCTCGATAGCGA GGGAAAACCATCTGCATCTCGTCATGCACGACATAGCGGTGGCGCAGGACGGCATGACCATGCCGGGGGAGGAGCATGTC CGCGACGTGCTCGATTTCGCCCGCCGCTGGGACCGGGCAAAGCCCATGGTCGTGCATTGCTATGCCGGCATCAGCCGCTC GACCGCTTCGGCCTACATCATCGCCGCCGCATTGGCGCCGAAACGCGACGAAGCCGAACTGGCCCAGACGTTGCGGGCGC TGTCGCCCTCGGCGACACCCAATCCGCGGCTCATCGCCGTGGCCGACGCACTGCTGGAGCGCAACGGCCGGATGATTGAG GCGATCCAGTCGATCGGGCGCGGCGCCGACGCCTTCGAAGGCACGCCGTTCGCGCTGAAGATCGAGGGCTAG
Upstream 100 bases:
>100_bases GCGTCCTGCTTCGGCATTTCTGCGATCGGCCGCATGTCCTGCGCGCCGGCCTGCCGGGGTGTCAGGAGGAATGGCGGCGG CTCGAATCGGCCCTTGCCGA
Downstream 100 bases:
>100_bases CTGTGCCCATACATCGTTGTAGGACTATCGAGTGCCTTCATTCGCCCAATCTTCGTGCCCGTGGCGTACCCGGACAATGA ACACGTCGCCGTCGGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MGDAARGSTKRFKTMIHVCSLAKIEETVARTGADRMLSLLSIGTEVTRPASIARENHLHLVMHDIAVAQDGMTMPGEEHV RDVLDFARRWDRAKPMVVHCYAGISRSTASAYIIAAALAPKRDEAELAQTLRALSPSATPNPRLIAVADALLERNGRMIE AIQSIGRGADAFEGTPFALKIEG
Sequences:
>Translated_183_residues MGDAARGSTKRFKTMIHVCSLAKIEETVARTGADRMLSLLSIGTEVTRPASIARENHLHLVMHDIAVAQDGMTMPGEEHV RDVLDFARRWDRAKPMVVHCYAGISRSTASAYIIAAALAPKRDEAELAQTLRALSPSATPNPRLIAVADALLERNGRMIE AIQSIGRGADAFEGTPFALKIEG >Mature_182_residues GDAARGSTKRFKTMIHVCSLAKIEETVARTGADRMLSLLSIGTEVTRPASIARENHLHLVMHDIAVAQDGMTMPGEEHVR DVLDFARRWDRAKPMVVHCYAGISRSTASAYIIAAALAPKRDEAELAQTLRALSPSATPNPRLIAVADALLERNGRMIEA IQSIGRGADAFEGTPFALKIEG
Specific function: Unknown
COG id: COG5350
COG function: function code R; Predicted protein tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19802; Mature: 19671
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDAARGSTKRFKTMIHVCSLAKIEETVARTGADRMLSLLSIGTEVTRPASIARENHLHL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHCCCHHHHHCCCHHH VMHDIAVAQDGMTMPGEEHVRDVLDFARRWDRAKPMVVHCYAGISRSTASAYIIAAALAP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCC KRDEAELAQTLRALSPSATPNPRLIAVADALLERNGRMIEAIQSIGRGADAFEGTPFALK CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEE IEG ECC >Mature Secondary Structure GDAARGSTKRFKTMIHVCSLAKIEETVARTGADRMLSLLSIGTEVTRPASIARENHLHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHCCCHHHHHCCCHHH VMHDIAVAQDGMTMPGEEHVRDVLDFARRWDRAKPMVVHCYAGISRSTASAYIIAAALAP HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCC KRDEAELAQTLRALSPSATPNPRLIAVADALLERNGRMIEAIQSIGRGADAFEGTPFALK CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEE IEG ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA