| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471319
Identifier: 13471319
GI number: 13471319
Start: 1057765
End: 1058586
Strand: Reverse
Name: 13471319
Synonym: mll1259
Alternate gene names: NA
Gene position: 1058586-1057765 (Counterclockwise)
Preceding gene: 13471320
Following gene: 13471318
Centisome position: 15.05
GC content: 62.65
Gene sequence:
>822_bases GTGGAAAGCATCGTTTCGTGGCCAAAACCGCGCGGCCTTGCACGTCATTCCGGGAGAAAAGCCATGAGTTCGCTCTCCAG CCTGGCGCGCATTGCCTTGTCGCTCAGCCTTCCCTCCGGCCTGCTCGATCGCGGGCCGTCGCTGCGCGGCACGAAATTCC TGGCCAAGGCGGCGCTGAAAGCGCGCTTCGGTGGTGCATCTCAGCCGTTCCAGATGGTCAATGTCGGCGCCTGCGATGGC GCGCTGTTCGACGATGTGACGCCGTGGCTGCACAGGATTGCCGGCGCCCGCGCCATGCTGGTCGAGCCGATCCCCTACAA TCAGAAGCGGCTGCGCGCCAACTATCCCGACAAGGAGCGCTTCATCATCGAGCCGGTGGCCGTCACAAAAACCAAGGGCA CGATCACCGTCCACACTTTCGACGCGGCGGCCCTTGAGGCCGGCACACTGCCGATCGAATTCATCGGCTGCTCCTCGGTG ACCGACACCAATTTGATGTCGGGCAAGAATGCCTGGGGCGAGGCCGACGCCAATTTCAACAAATTCGCACCGCACCTGAG AGATATCGAGGTGCCGTCGGAAACGCTGCAGACGCTGCTCGACCGCAACGGCATCAGCCATATCGATGCTTTCCTCGTCG ATTGTGAAGGCGCCGACTGGATGGTCTTCGAACAGCTTGATCTGAAACGCTACCGCCCCGGCTTGATCAAGGTCGAGGTC GGCGCGTTGCCGGCCACCGAGATCGGCCAGGTCGTGGTCAAGCTGAAGACGGCGGGCTACCAGGTCGGTTTCCAGGCCGA GGACGTCTGGGCCTTCGCCTGA
Upstream 100 bases:
>100_bases CGCTGGCGAAATTCACGGTCTTTCCGATCCACGATACGCGCATCTATTTCCCGCATCTGATCCCGCCCTTTCTGCTGCTG GCAACGCCGTTCATGGCGCT
Downstream 100 bases:
>100_bases CGGCTGGCGTTTTCCCGGGGTCGCGCCGCACCCGCAGCGTGTCGCAAACAGGCGGTAGCGCCGTGCCTGTCGTCTGCATA TTGTGCGCCGATCAAACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MESIVSWPKPRGLARHSGRKAMSSLSSLARIALSLSLPSGLLDRGPSLRGTKFLAKAALKARFGGASQPFQMVNVGACDG ALFDDVTPWLHRIAGARAMLVEPIPYNQKRLRANYPDKERFIIEPVAVTKTKGTITVHTFDAAALEAGTLPIEFIGCSSV TDTNLMSGKNAWGEADANFNKFAPHLRDIEVPSETLQTLLDRNGISHIDAFLVDCEGADWMVFEQLDLKRYRPGLIKVEV GALPATEIGQVVVKLKTAGYQVGFQAEDVWAFA
Sequences:
>Translated_273_residues MESIVSWPKPRGLARHSGRKAMSSLSSLARIALSLSLPSGLLDRGPSLRGTKFLAKAALKARFGGASQPFQMVNVGACDG ALFDDVTPWLHRIAGARAMLVEPIPYNQKRLRANYPDKERFIIEPVAVTKTKGTITVHTFDAAALEAGTLPIEFIGCSSV TDTNLMSGKNAWGEADANFNKFAPHLRDIEVPSETLQTLLDRNGISHIDAFLVDCEGADWMVFEQLDLKRYRPGLIKVEV GALPATEIGQVVVKLKTAGYQVGFQAEDVWAFA >Mature_273_residues MESIVSWPKPRGLARHSGRKAMSSLSSLARIALSLSLPSGLLDRGPSLRGTKFLAKAALKARFGGASQPFQMVNVGACDG ALFDDVTPWLHRIAGARAMLVEPIPYNQKRLRANYPDKERFIIEPVAVTKTKGTITVHTFDAAALEAGTLPIEFIGCSSV TDTNLMSGKNAWGEADANFNKFAPHLRDIEVPSETLQTLLDRNGISHIDAFLVDCEGADWMVFEQLDLKRYRPGLIKVEV GALPATEIGQVVVKLKTAGYQVGFQAEDVWAFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29710; Mature: 29710
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESIVSWPKPRGLARHSGRKAMSSLSSLARIALSLSLPSGLLDRGPSLRGTKFLAKAALK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHH ARFGGASQPFQMVNVGACDGALFDDVTPWLHRIAGARAMLVEPIPYNQKRLRANYPDKER HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCE FIIEPVAVTKTKGTITVHTFDAAALEAGTLPIEFIGCSSVTDTNLMSGKNAWGEADANFN EEEECEEEEECCCEEEEEECCHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCHH KFAPHLRDIEVPSETLQTLLDRNGISHIDAFLVDCEGADWMVFEQLDLKRYRPGLIKVEV HHCCCHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHCCCCEEEEEE GALPATEIGQVVVKLKTAGYQVGFQAEDVWAFA CCCCHHHHHHEEEEEEECCEEECCCCCCEEECC >Mature Secondary Structure MESIVSWPKPRGLARHSGRKAMSSLSSLARIALSLSLPSGLLDRGPSLRGTKFLAKAALK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHH ARFGGASQPFQMVNVGACDGALFDDVTPWLHRIAGARAMLVEPIPYNQKRLRANYPDKER HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCE FIIEPVAVTKTKGTITVHTFDAAALEAGTLPIEFIGCSSVTDTNLMSGKNAWGEADANFN EEEECEEEEECCCEEEEEECCHHHHCCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCHH KFAPHLRDIEVPSETLQTLLDRNGISHIDAFLVDCEGADWMVFEQLDLKRYRPGLIKVEV HHCCCHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEHHHHHHCCCCEEEEEE GALPATEIGQVVVKLKTAGYQVGFQAEDVWAFA CCCCHHHHHHEEEEEEECCEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA