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The map label for this gene is 13471288

Identifier: 13471288

GI number: 13471288

Start: 1026632

End: 1027654

Strand: Reverse

Name: 13471288

Synonym: mll1216

Alternate gene names: NA

Gene position: 1027654-1026632 (Counterclockwise)

Preceding gene: 13471291

Following gene: 13471287

Centisome position: 14.61

GC content: 60.7

Gene sequence:

>1023_bases
GTGGTCGATAGCATGACAGGCAAGAGCATCAAGCGACGCAACGTACCGGCCATCGAATGGCCTACCGTGGTTCTCGCTTT
CTTCTGTTACGGAACGTGGCTTGGCACCGGTTTCCTGCTCTGGCCGTCCTATCCCATCCTCGCGCTCGCTCTTCTCGGCT
TCATCCTGGCATTGCAGTCGTCGATCATGCACGAAGTGCTGCATGGCCATCCGACGCGCAGCGCGTTGATCAACGAAGCC
TTCGTCTTCCTGCCGATCGGTCTGGTCTGGCCGTTCCGCCGCTTCAAGACGCTGCATTTGCGCCATCATGCCGACGAGCG
GCTGACCGACCCGCTCGATGATCCCGAAAGCTACTACCAGGCGCTGTGGCAGCATGACGAATTGCCGCCGACGATGAAGT
TCCTGCTCAAGATCAACAACACCATGGTCGGCCGTTTCTTCTTCGGCCCCTGGCTGTCCTGCATCGGCTTCTTCATCGAC
GATTTCAAGCAGATGATGGCCGGCGACAAGGCGATCCGCAAGGCATGGCTGCTGCATGCGATCGGCCTCGCCATCGTGGC
GCCGATCGTGCAGTTCGGCTTCGGCATTCCGCTGTGGCTCTACATTCTGGCGCCGGTCTGGCTCGGCCAGTCGCTGATCG
CGATCCGCACCTTTGCCGAGCATCAGTGGTCCGAGCATCCGGAAGGCCGTACGGTGATCATCGAGCGCTCGCCGCTGTCG
TTCCTGTTCCTCAACAACAATCTGCACTTCGTCCATCACAAGACGCCTACGGTGGCCTGGTACAGGCTGCCGAAACTGTT
TCGCGAGCGTCGCGACGAATGGCTGCGGATGAACAATGGCTATGCTTATCCGAATTATTTCGCGCTGATCAAAGCCTATG
CCTTCAAGGCGAAGGAGCCGATCGTGCATCCGGTGCTGCGGCGTGCGCCTGAGCACGGGCGGGCGTTCAAGCCACGCATC
CGGGCGCGCAACATCAATGGGCTCGGCACGGCGCCGGTGCCCGCCGAGCCGCCCAAGGAATAA

Upstream 100 bases:

>100_bases
GCAATCGCAACATTTTGTATACTTTGTCGCGTTGAGTGGAATCGTTTCTCCTGACACTATGCTGTCAGGAACCAGTTGGG
GTTCCGGCGACTGAGGGGCA

Downstream 100 bases:

>100_bases
TTCGGGGCATCCCTCGGGTTCCGTGTCGGCCAATTCTGATTGGACGCCGCGTTTTTGCGATCCTTTTTCCAGACGTGATG
ATTTGATATCGGCATGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Beta-Carotene Ketolase

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MVDSMTGKSIKRRNVPAIEWPTVVLAFFCYGTWLGTGFLLWPSYPILALALLGFILALQSSIMHEVLHGHPTRSALINEA
FVFLPIGLVWPFRRFKTLHLRHHADERLTDPLDDPESYYQALWQHDELPPTMKFLLKINNTMVGRFFFGPWLSCIGFFID
DFKQMMAGDKAIRKAWLLHAIGLAIVAPIVQFGFGIPLWLYILAPVWLGQSLIAIRTFAEHQWSEHPEGRTVIIERSPLS
FLFLNNNLHFVHHKTPTVAWYRLPKLFRERRDEWLRMNNGYAYPNYFALIKAYAFKAKEPIVHPVLRRAPEHGRAFKPRI
RARNINGLGTAPVPAEPPKE

Sequences:

>Translated_340_residues
MVDSMTGKSIKRRNVPAIEWPTVVLAFFCYGTWLGTGFLLWPSYPILALALLGFILALQSSIMHEVLHGHPTRSALINEA
FVFLPIGLVWPFRRFKTLHLRHHADERLTDPLDDPESYYQALWQHDELPPTMKFLLKINNTMVGRFFFGPWLSCIGFFID
DFKQMMAGDKAIRKAWLLHAIGLAIVAPIVQFGFGIPLWLYILAPVWLGQSLIAIRTFAEHQWSEHPEGRTVIIERSPLS
FLFLNNNLHFVHHKTPTVAWYRLPKLFRERRDEWLRMNNGYAYPNYFALIKAYAFKAKEPIVHPVLRRAPEHGRAFKPRI
RARNINGLGTAPVPAEPPKE
>Mature_340_residues
MVDSMTGKSIKRRNVPAIEWPTVVLAFFCYGTWLGTGFLLWPSYPILALALLGFILALQSSIMHEVLHGHPTRSALINEA
FVFLPIGLVWPFRRFKTLHLRHHADERLTDPLDDPESYYQALWQHDELPPTMKFLLKINNTMVGRFFFGPWLSCIGFFID
DFKQMMAGDKAIRKAWLLHAIGLAIVAPIVQFGFGIPLWLYILAPVWLGQSLIAIRTFAEHQWSEHPEGRTVIIERSPLS
FLFLNNNLHFVHHKTPTVAWYRLPKLFRERRDEWLRMNNGYAYPNYFALIKAYAFKAKEPIVHPVLRRAPEHGRAFKPRI
RARNINGLGTAPVPAEPPKE

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39298; Mature: 39298

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDSMTGKSIKRRNVPAIEWPTVVLAFFCYGTWLGTGFLLWPSYPILALALLGFILALQS
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
SIMHEVLHGHPTRSALINEAFVFLPIGLVWPFRRFKTLHLRHHADERLTDPLDDPESYYQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHH
ALWQHDELPPTMKFLLKINNTMVGRFFFGPWLSCIGFFIDDFKQMMAGDKAIRKAWLLHA
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IGLAIVAPIVQFGFGIPLWLYILAPVWLGQSLIAIRTFAEHQWSEHPEGRTVIIERSPLS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCE
FLFLNNNLHFVHHKTPTVAWYRLPKLFRERRDEWLRMNNGYAYPNYFALIKAYAFKAKEP
EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
IVHPVLRRAPEHGRAFKPRIRARNINGLGTAPVPAEPPKE
HHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVDSMTGKSIKRRNVPAIEWPTVVLAFFCYGTWLGTGFLLWPSYPILALALLGFILALQS
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHH
SIMHEVLHGHPTRSALINEAFVFLPIGLVWPFRRFKTLHLRHHADERLTDPLDDPESYYQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHH
ALWQHDELPPTMKFLLKINNTMVGRFFFGPWLSCIGFFIDDFKQMMAGDKAIRKAWLLHA
HHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
IGLAIVAPIVQFGFGIPLWLYILAPVWLGQSLIAIRTFAEHQWSEHPEGRTVIIERSPLS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCE
FLFLNNNLHFVHHKTPTVAWYRLPKLFRERRDEWLRMNNGYAYPNYFALIKAYAFKAKEP
EEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
IVHPVLRRAPEHGRAFKPRIRARNINGLGTAPVPAEPPKE
HHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA