Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13471287

Identifier: 13471287

GI number: 13471287

Start: 1025711

End: 1026538

Strand: Reverse

Name: 13471287

Synonym: mll1215

Alternate gene names: NA

Gene position: 1026538-1025711 (Counterclockwise)

Preceding gene: 13471288

Following gene: 13471283

Centisome position: 14.59

GC content: 64.49

Gene sequence:

>828_bases
ATGAGTGAATCGATTGCGGCATTGCCGATGTATGACTGGCCCGAAGTGCGCGGCGAGGTCGATGCGCAGTGGGCGCTGCT
GTGCGATGTCTTCCGGCAAAAGGGTATCGACGCACCGCAAACCATCGTGCGCCGCAATGGCGACCTGCCGCCGGTGCCGG
GCGGCATCCATGATGCCGAGGGAGCCTGGATCGCGCCGGATCCTGCGACATTGCCGCCGGATGAACTTGATTTTCACAAG
CTCTGGCTGCACCCGGCGCTGCTCTTCGCGCAGACCTGCTGGGGGCCGATGGAACTCGGCCTGTCGAGCCATGTGCAAGT
GATCGGCCAGCCAAGCTATGACGCCTATGAGGGCGGGCAGGGTGAGCTCTATTCCAGCGCGCTGGTGATGCGGACAGGCG
AGGGATCGGAAGCCCGTTCGCCCGCGGACGGCAAGGCACTGCTGCCGCTCGACCTGATGCGAGGCAAGCGCTTCACCTTC
AACAGCCTGGATTCCATGTCGGGCATGATCGGGCTGACGCGTGATCTGCAGGCGGCCGGCGAAAGTCTCGATATCTTTTC
CTCGCGCAGCGAAAGCGGCGGTCATCGCGCTTCGATCGTTACTGTTGCCGAGGGCAGGGCAGATGTCGCCGCGATCGACT
GCGAAAGCTGGGCGTTAGCGCAGCGTTTCGAGCCGGCGGCGCGCAAGGTGGCGATTGTCGGCTGGACGGCACGGCGCAAG
GGCCTGCCCTTCATCACTGCCAGGACGACGCCGGAAAAGACCGTCCGGGCAATGCGCGAAGCCTTGGCTGGGCTAGCCGA
GCAGCCTCGCATCCAACGGGTAGGTTGA

Upstream 100 bases:

>100_bases
GGAATAATTCGGGGCATCCCTCGGGTTCCGTGTCGGCCAATTCTGATTGGACGCCGCGTTTTTGCGATCCTTTTTCCAGA
CGTGATGATTTGATATCGGC

Downstream 100 bases:

>100_bases
AAGCTGCTCGCTGCCGGTCTCGGTGATCAGGATCTGCTCCTCGATCTTGACGCCTTCGCGGCCGCCAAGCCGGCCAATAT
AGCTTTCCACGCACAGCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSESIAALPMYDWPEVRGEVDAQWALLCDVFRQKGIDAPQTIVRRNGDLPPVPGGIHDAEGAWIAPDPATLPPDELDFHK
LWLHPALLFAQTCWGPMELGLSSHVQVIGQPSYDAYEGGQGELYSSALVMRTGEGSEARSPADGKALLPLDLMRGKRFTF
NSLDSMSGMIGLTRDLQAAGESLDIFSSRSESGGHRASIVTVAEGRADVAAIDCESWALAQRFEPAARKVAIVGWTARRK
GLPFITARTTPEKTVRAMREALAGLAEQPRIQRVG

Sequences:

>Translated_275_residues
MSESIAALPMYDWPEVRGEVDAQWALLCDVFRQKGIDAPQTIVRRNGDLPPVPGGIHDAEGAWIAPDPATLPPDELDFHK
LWLHPALLFAQTCWGPMELGLSSHVQVIGQPSYDAYEGGQGELYSSALVMRTGEGSEARSPADGKALLPLDLMRGKRFTF
NSLDSMSGMIGLTRDLQAAGESLDIFSSRSESGGHRASIVTVAEGRADVAAIDCESWALAQRFEPAARKVAIVGWTARRK
GLPFITARTTPEKTVRAMREALAGLAEQPRIQRVG
>Mature_274_residues
SESIAALPMYDWPEVRGEVDAQWALLCDVFRQKGIDAPQTIVRRNGDLPPVPGGIHDAEGAWIAPDPATLPPDELDFHKL
WLHPALLFAQTCWGPMELGLSSHVQVIGQPSYDAYEGGQGELYSSALVMRTGEGSEARSPADGKALLPLDLMRGKRFTFN
SLDSMSGMIGLTRDLQAAGESLDIFSSRSESGGHRASIVTVAEGRADVAAIDCESWALAQRFEPAARKVAIVGWTARRKG
LPFITARTTPEKTVRAMREALAGLAEQPRIQRVG

Specific function: Unknown

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29805; Mature: 29674

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESIAALPMYDWPEVRGEVDAQWALLCDVFRQKGIDAPQTIVRRNGDLPPVPGGIHDAE
CCCCCEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCC
GAWIAPDPATLPPDELDFHKLWLHPALLFAQTCWGPMELGLSSHVQVIGQPSYDAYEGGQ
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCC
GELYSSALVMRTGEGSEARSPADGKALLPLDLMRGKRFTFNSLDSMSGMIGLTRDLQAAG
CCEECCEEEEECCCCCCCCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
ESLDIFSSRSESGGHRASIVTVAEGRADVAAIDCESWALAQRFEPAARKVAIVGWTARRK
CCEEHHCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHCCHHHHEEEEEEEHHHCC
GLPFITARTTPEKTVRAMREALAGLAEQPRIQRVG
CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SESIAALPMYDWPEVRGEVDAQWALLCDVFRQKGIDAPQTIVRRNGDLPPVPGGIHDAE
CCCCEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCC
GAWIAPDPATLPPDELDFHKLWLHPALLFAQTCWGPMELGLSSHVQVIGQPSYDAYEGGQ
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCC
GELYSSALVMRTGEGSEARSPADGKALLPLDLMRGKRFTFNSLDSMSGMIGLTRDLQAAG
CCEECCEEEEECCCCCCCCCCCCCCEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
ESLDIFSSRSESGGHRASIVTVAEGRADVAAIDCESWALAQRFEPAARKVAIVGWTARRK
CCEEHHCCCCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHHCCHHHHEEEEEEEHHHCC
GLPFITARTTPEKTVRAMREALAGLAEQPRIQRVG
CCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA