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The map label for this gene is ycgM [C]

Identifier: 13471222

GI number: 13471222

Start: 950675

End: 951373

Strand: Direct

Name: ycgM [C]

Synonym: mlr1134

Alternate gene names: 13471222

Gene position: 950675-951373 (Clockwise)

Preceding gene: 13471220

Following gene: 13471223

Centisome position: 13.51

GC content: 66.38

Gene sequence:

>699_bases
ATGACCGCCTTCGTCCTTCCCGTGCCGCCAACGCCTTCCGTCGCCATCAGCGGGTCGGACGAGCGCTTTGCCGTGCGGCG
CATTTTCTGCGTCGGCCGCAACTATGCAGCGCATGCGCGCGAATTCGGCAATGATGAGCGCGATCCGCCCTTCTTCTTCA
CCAAGCCGGCCGACGCGGTGGTCGATACCGGGACCGTCATCCCCTACCCGCCGCTGACGGCCAATCTGCACCATGAAATC
GAACTGGTCGCCGCGATCGGCAAAGCCGGTTGCCGCATTCCCCGCGACAAGGCGCTGGACCATGTCTGGGGCTACGCCGT
CGGCATCGACCTCACCCGCCGCGATCTCCAGGACGAGGCCAAGAAGGCGGCGCGGCCCTGGGACTGGTCGAAGGCCTTCG
ACCGTTCCGCCCCTTGCGGCCCGCTGATTCCCGCGCAGAAATCCGGGCATCCGGCGAAGGGGCGTATCTGGCTCACCCTC
GACGGCAAGGTCCGGCAGGACGCCGATCTCACCGAGCTAATCTGGCCGATAGCAGACATTGTCTCGATCTGCAGCGAGGG
CGTAGAATTGCAAGCCGGCGACCTGATCTTCACTGGCACGCCGGCCGGCGTCGGTGCCGTCAAGCCCGGCGAGACGATGA
CCGGCGGCGTCGACGGCATCGGCACGATCGAAGTCACGGTCGGCCAACCGCAGTCGTGA

Upstream 100 bases:

>100_bases
GCGGCCCAAAGCCCCCGCTTTATGAAAGCGACGCCTTGCCCGGTCCCCGAAATCGGCCGAAGGTGCCGCCATCATCCTGA
TAGCCAGCGCAGAGACCGCC

Downstream 100 bases:

>100_bases
ACGACAAAGCCATGAGCGACATCGTCCTGCACAATTACTACCGTTCCTCCACCTCCTACCGGGTGCGCATCGCGCTGGAG
ATGAAGGGGCTGAGCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MTAFVLPVPPTPSVAISGSDERFAVRRIFCVGRNYAAHAREFGNDERDPPFFFTKPADAVVDTGTVIPYPPLTANLHHEI
ELVAAIGKAGCRIPRDKALDHVWGYAVGIDLTRRDLQDEAKKAARPWDWSKAFDRSAPCGPLIPAQKSGHPAKGRIWLTL
DGKVRQDADLTELIWPIADIVSICSEGVELQAGDLIFTGTPAGVGAVKPGETMTGGVDGIGTIEVTVGQPQS

Sequences:

>Translated_232_residues
MTAFVLPVPPTPSVAISGSDERFAVRRIFCVGRNYAAHAREFGNDERDPPFFFTKPADAVVDTGTVIPYPPLTANLHHEI
ELVAAIGKAGCRIPRDKALDHVWGYAVGIDLTRRDLQDEAKKAARPWDWSKAFDRSAPCGPLIPAQKSGHPAKGRIWLTL
DGKVRQDADLTELIWPIADIVSICSEGVELQAGDLIFTGTPAGVGAVKPGETMTGGVDGIGTIEVTVGQPQS
>Mature_231_residues
TAFVLPVPPTPSVAISGSDERFAVRRIFCVGRNYAAHAREFGNDERDPPFFFTKPADAVVDTGTVIPYPPLTANLHHEIE
LVAAIGKAGCRIPRDKALDHVWGYAVGIDLTRRDLQDEAKKAARPWDWSKAFDRSAPCGPLIPAQKSGHPAKGRIWLTLD
GKVRQDADLTELIWPIADIVSICSEGVELQAGDLIFTGTPAGVGAVKPGETMTGGVDGIGTIEVTVGQPQS

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=206, Percent_Identity=39.8058252427184, Blast_Score=172, Evalue=3e-43,
Organism=Homo sapiens, GI66348062, Length=195, Percent_Identity=41.025641025641, Blast_Score=168, Evalue=4e-42,
Organism=Homo sapiens, GI215422413, Length=195, Percent_Identity=41.025641025641, Blast_Score=168, Evalue=5e-42,
Organism=Homo sapiens, GI156231349, Length=205, Percent_Identity=29.7560975609756, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI40786394, Length=205, Percent_Identity=29.2682926829268, Blast_Score=100, Evalue=8e-22,
Organism=Escherichia coli, GI1787428, Length=198, Percent_Identity=35.8585858585859, Blast_Score=140, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI17557057, Length=196, Percent_Identity=37.2448979591837, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6324161, Length=220, Percent_Identity=33.6363636363636, Blast_Score=134, Evalue=1e-32,
Organism=Drosophila melanogaster, GI28571789, Length=202, Percent_Identity=31.1881188118812, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI28572127, Length=206, Percent_Identity=30.0970873786408, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24876; Mature: 24745

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAFVLPVPPTPSVAISGSDERFAVRRIFCVGRNYAAHAREFGNDERDPPFFFTKPADAV
CCEEEEECCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEECCCCHH
VDTGTVIPYPPLTANLHHEIELVAAIGKAGCRIPRDKALDHVWGYAVGIDLTRRDLQDEA
CCCCCCCCCCCCCCCCCHHHHEEEHHHHHCCCCCHHHHHHHHHHEEEEEHHHHHHHHHHH
KKAARPWDWSKAFDRSAPCGPLIPAQKSGHPAKGRIWLTLDGKVRQDADLTELIWPIADI
HHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
VSICSEGVELQAGDLIFTGTPAGVGAVKPGETMTGGVDGIGTIEVTVGQPQS
HHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
TAFVLPVPPTPSVAISGSDERFAVRRIFCVGRNYAAHAREFGNDERDPPFFFTKPADAV
CEEEEECCCCCCEEECCCCCCEEEEEEEECCCCHHHHHHHHCCCCCCCCEEEECCCCHH
VDTGTVIPYPPLTANLHHEIELVAAIGKAGCRIPRDKALDHVWGYAVGIDLTRRDLQDEA
CCCCCCCCCCCCCCCCCHHHHEEEHHHHHCCCCCHHHHHHHHHHEEEEEHHHHHHHHHHH
KKAARPWDWSKAFDRSAPCGPLIPAQKSGHPAKGRIWLTLDGKVRQDADLTELIWPIADI
HHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
VSICSEGVELQAGDLIFTGTPAGVGAVKPGETMTGGVDGIGTIEVTVGQPQS
HHHHHCCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]