| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is cutM [H]
Identifier: 13471216
GI number: 13471216
Start: 942824
End: 943621
Strand: Reverse
Name: cutM [H]
Synonym: mll1127
Alternate gene names: 13471216
Gene position: 943621-942824 (Counterclockwise)
Preceding gene: 13471217
Following gene: 13471215
Centisome position: 13.41
GC content: 64.41
Gene sequence:
>798_bases ATGTATTCGGTCAACTACCACCGTGCCGCCTCGGTCGCGGATGCCGCCAAGCTGGTGAAGAACGGCGACGCCAAGCTGCT GTCCGGCGGCATGACGCTGATCCCCGCTATGAAGACGCGGCTGGCGGCCCCTTCCGATCTCGTCGATCTGTCGCACATCA AGGAGATGCAGGGCGTCAAGGTGTCGGGAAAGACGGTCACCATCGGCGCGGCTACCACGCATTTCGACGTCTCCAACGAC GAGAAACTCAAGAAGGCCTGCCCGGCGCTTGCCCATCTGGCGTCGCTGATCGGTGACCCGGCGGTGCGCCACAAGGGCAC GATCGGCGGTTCGATCGCCAACAACGATCCGGCGGCCGACTATCCCGCGGCACTTCTGGCGCTGGGCGCCACGATCGTCA CCAACAAGCGCGAGATATCGGCCGACAAGTTCTTCAAAGGCCTGTTCGAAACGGCCTTGAAGGATGGCGAGATCATAACG GCGGTCTCCTTCACCGCCCCGGCCAAGGCGGCTTACGAGAAATTCCGCAACCCGGCCTCGCGTTACGCGATCGTCGGCGT GTTCGTGGCCAAGGGCAAGGACGGCGTCAGCGTCGCCGTGACCGGCGCCGGCGACGACGGGGTCTTCCGCTCGAAGGAGA TCGAGGCAGCCCTTGCGAAGAATTTCGACGCCGCATCGCTCGCCGGCGTGAAAGTGCCGGCGAAGAACCTGATGAGCGAC ATCCACGCTTCCGCCGACTACCGCGCCAATCTGATCGTGGTCATGGCCAAGCGCGCGGTGGCGGCAGCCAACGCCTGA
Upstream 100 bases:
>100_bases CATCACCGATGCCATCGGCATCGCCGATATCGCCATGCCCGCCTCGCCGCCCACCGTGTGGGCCGCGATCCGCGCCGCGA AGCATTGAGGAGGAACAACC
Downstream 100 bases:
>100_bases CAGCATCGGTTGCCGACAGGAAAGGGGCCATCTTGGCCCCTTTTTCGTGGGCGGTGGTGTAGCCGTGCGGCTCGTGAAGG AACGCCGCGGGACCGCTCCT
Product: carbon monoxide dehydrogenase chain C
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MYSVNYHRAASVADAAKLVKNGDAKLLSGGMTLIPAMKTRLAAPSDLVDLSHIKEMQGVKVSGKTVTIGAATTHFDVSND EKLKKACPALAHLASLIGDPAVRHKGTIGGSIANNDPAADYPAALLALGATIVTNKREISADKFFKGLFETALKDGEIIT AVSFTAPAKAAYEKFRNPASRYAIVGVFVAKGKDGVSVAVTGAGDDGVFRSKEIEAALAKNFDAASLAGVKVPAKNLMSD IHASADYRANLIVVMAKRAVAAANA
Sequences:
>Translated_265_residues MYSVNYHRAASVADAAKLVKNGDAKLLSGGMTLIPAMKTRLAAPSDLVDLSHIKEMQGVKVSGKTVTIGAATTHFDVSND EKLKKACPALAHLASLIGDPAVRHKGTIGGSIANNDPAADYPAALLALGATIVTNKREISADKFFKGLFETALKDGEIIT AVSFTAPAKAAYEKFRNPASRYAIVGVFVAKGKDGVSVAVTGAGDDGVFRSKEIEAALAKNFDAASLAGVKVPAKNLMSD IHASADYRANLIVVMAKRAVAAANA >Mature_265_residues MYSVNYHRAASVADAAKLVKNGDAKLLSGGMTLIPAMKTRLAAPSDLVDLSHIKEMQGVKVSGKTVTIGAATTHFDVSND EKLKKACPALAHLASLIGDPAVRHKGTIGGSIANNDPAADYPAALLALGATIVTNKREISADKFFKGLFETALKDGEIIT AVSFTAPAKAAYEKFRNPASRYAIVGVFVAKGKDGVSVAVTGAGDDGVFRSKEIEAALAKNFDAASLAGVKVPAKNLMSD IHASADYRANLIVVMAKRAVAAANA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=291, Percent_Identity=25.085910652921, Blast_Score=72, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 27452; Mature: 27452
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSVNYHRAASVADAAKLVKNGDAKLLSGGMTLIPAMKTRLAAPSDLVDLSHIKEMQGVK CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCE VSGKTVTIGAATTHFDVSNDEKLKKACPALAHLASLIGDPAVRHKGTIGGSIANNDPAAD ECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCH YPAALLALGATIVTNKREISADKFFKGLFETALKDGEIITAVSFTAPAKAAYEKFRNPAS HHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHH RYAIVGVFVAKGKDGVSVAVTGAGDDGVFRSKEIEAALAKNFDAASLAGVKVPAKNLMSD HEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH IHASADYRANLIVVMAKRAVAAANA HHCCCCCCCCEEEEEEHHHHHHCCC >Mature Secondary Structure MYSVNYHRAASVADAAKLVKNGDAKLLSGGMTLIPAMKTRLAAPSDLVDLSHIKEMQGVK CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCE VSGKTVTIGAATTHFDVSNDEKLKKACPALAHLASLIGDPAVRHKGTIGGSIANNDPAAD ECCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCH YPAALLALGATIVTNKREISADKFFKGLFETALKDGEIITAVSFTAPAKAAYEKFRNPAS HHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCHHH RYAIVGVFVAKGKDGVSVAVTGAGDDGVFRSKEIEAALAKNFDAASLAGVKVPAKNLMSD HEEEEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCCHHHHHHH IHASADYRANLIVVMAKRAVAAANA HHCCCCCCCCEEEEEEHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]