| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471207
Identifier: 13471207
GI number: 13471207
Start: 934928
End: 936736
Strand: Reverse
Name: 13471207
Synonym: mll1116
Alternate gene names: NA
Gene position: 936736-934928 (Counterclockwise)
Preceding gene: 13471208
Following gene: 13471203
Centisome position: 13.31
GC content: 54.06
Gene sequence:
>1809_bases ATGTTTGCAGTCATACGCGCTCATTTTACAGCCACTCCAGTGAGCGACGTCTGGTCCGACGCCGAAATGCGGAACTGGCT TGACCCTACAATACCTTACAGCGTCGCCCACTATTGGTCCCAAACATCTTTCTCGCAAATCGATTTAAGTTATCAACTGT TGCCGATACTTCAGCTTGCTGACCCACGCAATGACCCGAATTTCGGCATGACGGCCCGGCAAAGGCTTGTGAATGCTGTC CTCGCCGGGGCCACTAACGAGTGGGACCCAGATTGGTCCACTTTCGCCCACGTCGTTATCTGGTTTCCTGCCGCGATAGA TCTTCACGGTGGCGGCAGCTATAGCGTCAAACGCAAGGACGGCACCGGCGAACGAAGCATCGTCGTTGCGGTCGTCAACA AGGGGGCGCGGTTCGACACGATCTGTCAGGAGTTTGGACACAATTTCGGATTTCAGCATGAACGAAATCAAGCGGGAGGC GAATACGGCAGTCCCTATTCCACGATGAGTTCCTCTGTATTCCCCGACAACGCCTTCGAGCGCCCTGCCTCTCCACAGCT TCCGGCAGGTCTTGCGCCTTTCGACGGCAGCCCTCCGCCTACGACGGATGTCATGCGTATAGCCGGTCCGTATGTTACTC CATTGCAGTTCTTCGTGAATCGGACCGGAGACTTCGTGCATGCCGATTCGGTTGAAGAGCTCCCGGCCACATTCCAAGAT GCCCATATCAATGTATACCTCCGAGCGCTCGATGTAGGAGTAACGTCTTGGCCAACACGCCGTAAGGTCTTGGCAGTCGT TCCGCCCGCATACGGGGACGCAAATGGATATGGAATCGAAATTCGCAGACCGCGCGAGTACGACCAAGGTCTCAACGAGA CTCCAGCACCCGGTATTTCAGGTGTCGCAGGCGCCGTGATTCATTCTTTTGATCCTTCCACCAAACTCATTACCTATGTT GGTTGCATACCGTTTGCTGGCCTTGAAGGTGATCGAGACTATCGGATCGGAAATTTGGTCATCCGACTCAACAATTTCAA CGACGACTCCGATTTTGTAGGCGTTACTGTTGGTGGGACCAAATTGGGCGAAGCCGCGATTCAGTTCGCACCGGCGCAGA TGTCGTCAACCGTTACCTACACGACAGATTGGGAGTGGGTGTATGCAACTCCGTGCAGAATGTTTCCTGAAAACTCATAC GCCCAGCGCAGCCACCTAAAATCCACCAAAGTCGTCCTGGCTGCTCTCTCTCAGGGGTATGAAGCGCCGGGATACGTTTG GACAATTAATGACGTGGCAGTTGACCCTGAGCAGATCAGTATGGAAGTTTCGGTCAATGTGCGGTCCGGCGATCCAGGTC TAGGCAGGCAGTTTCGAAGTGAAAGCATCACCGTAAAGTATCGAATTATAGATAACCGCCTGGAGTTCGAATCCGATGCG CCGTATTCGGAGTTCAGCCTGAGTGTGTCTGCAACGGTGAGCGAAACGCTAACCGCCGCTGCCGCGTCCACGCCCGCTCG CTCCGTATCAACAGACGTTACATTCCAGAACGCAGAGATTGAATGGTCGCTGTCATACCTCGAAAAAATGGTGCAGTGCT GGCGCGAGCACATCTACCAGTGGACCCCCGAGGACATGTTCGGCATTCCCACGGGCAACGGTGCCGTTGCCGTCAAAATA CGCCAGTTCAAACAGCTCCACGACCACCTACTGGGGACGAATCCTGAACTCGCGGAAACTCTCACGAGAGAAGTCCTAAA ACTGGGAAATATTACTAGGGATGATCTTTTTGCCCAGCCTGGCCCCTAA
Upstream 100 bases:
>100_bases GCTTGCAAATCACGTCACTTTACACAAAACTTGACCATCGAGGCCAGTCATCCTGTGGATGTCGGTTTAGTTAATTCAAA ATGAATGAGGAGGGTAGGCG
Downstream 100 bases:
>100_bases GAGTCCGACTCGAAACTCATGTATGGCGTGCCAGGCGCCGGATGAGGAGCATGGTTGAGGCGGCGTAGAGGAAGGCTTCG GCGGAGGCGATGATGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP
Sequences:
>Translated_602_residues MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP >Mature_602_residues MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLADPRNDPNFGMTARQRLVNAV LAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKDGTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGG EYGSPYSTMSSSVFPDNAFERPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGISGVAGAVIHSFDPSTKLITYV GCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGTKLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSY AQRSHLKSTKVVLAALSQGYEAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQWTPEDMFGIPTGNGAVAVKI RQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQPGP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66423; Mature: 66423
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLA CEEEEEEEECCCCHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHC DPRNDPNFGMTARQRLVNAVLAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKD CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEEEECCCCCEEEEECC GTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGGEYGSPYSTMSSSVFPDNAFE CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC RPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHCCCCCC AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGIS CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCC GVAGAVIHSFDPSTKLITYVGCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGT HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC KLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSYAQRSHLKSTKVVLAALSQGY HHCCHHHEECCCHHCCEEEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCC EAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA CCCCEEEEECCEEECHHHEEEEEEEEEECCCCCCCHHHCCCCEEEEEEEECCEECCCCCC PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQ CCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHCC WTPEDMFGIPTGNGAVAVKIRQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQP CCCCHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC GP CC >Mature Secondary Structure MFAVIRAHFTATPVSDVWSDAEMRNWLDPTIPYSVAHYWSQTSFSQIDLSYQLLPILQLA CEEEEEEEECCCCHHHHHCCHHHHHCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHC DPRNDPNFGMTARQRLVNAVLAGATNEWDPDWSTFAHVVIWFPAAIDLHGGGSYSVKRKD CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEEEEEEEECCCCCEEEEECC GTGERSIVVAVVNKGARFDTICQEFGHNFGFQHERNQAGGEYGSPYSTMSSSVFPDNAFE CCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC RPASPQLPAGLAPFDGSPPPTTDVMRIAGPYVTPLQFFVNRTGDFVHADSVEELPATFQD CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCHHHHCCCCCC AHINVYLRALDVGVTSWPTRRKVLAVVPPAYGDANGYGIEIRRPREYDQGLNETPAPGIS CEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCC GVAGAVIHSFDPSTKLITYVGCIPFAGLEGDRDYRIGNLVIRLNNFNDDSDFVGVTVGGT HHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEECCC KLGEAAIQFAPAQMSSTVTYTTDWEWVYATPCRMFPENSYAQRSHLKSTKVVLAALSQGY HHCCHHHEECCCHHCCEEEEEECCCEEEECCCEECCCCCHHHHHHHHHHHHHHHHHHCCC EAPGYVWTINDVAVDPEQISMEVSVNVRSGDPGLGRQFRSESITVKYRIIDNRLEFESDA CCCCEEEEECCEEECHHHEEEEEEEEEECCCCCCCHHHCCCCEEEEEEEECCEECCCCCC PYSEFSLSVSATVSETLTAAAASTPARSVSTDVTFQNAEIEWSLSYLEKMVQCWREHIYQ CCCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHHHCC WTPEDMFGIPTGNGAVAVKIRQFKQLHDHLLGTNPELAETLTREVLKLGNITRDDLFAQP CCCCHHCCCCCCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCC GP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA