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The map label for this gene is omp85 [H]

Identifier: 13470835

GI number: 13470835

Start: 502725

End: 505109

Strand: Reverse

Name: omp85 [H]

Synonym: mll0636

Alternate gene names: 13470835

Gene position: 505109-502725 (Counterclockwise)

Preceding gene: 13470836

Following gene: 13470834

Centisome position: 7.18

GC content: 60.42

Gene sequence:

>2385_bases
ATGAAGGCAGCATCCAAGTTTCTGAGCGCCGCGTCAGCGGCGGCACTGTCCGCCGCTCTGGTCGTGCCAGGTGCGCTCGC
AGTACAATTCGTTGCCACATCGGCGGCTGAAGCCGCTGTCGTCAGCAGGGTGGAGGTGAGCGGCAACCAGCGTGTCGACG
CCGATACCATCCGCAATTACATCACCATCAAGCCGGGCAAAGCCTTCTCCAGTTCCGATGTCGACGCGGCCGTCAAGGCG
TTGTTCGGCACCGGCCTGTTCTCCGACGTCCAGATCAATCAGGTCGGCTCGACGCTGGTGGTCAAGGTCGCCGAATACAA
GGTCGTCAACCAGGTGCTGTTCCAGGGCAACAAGAAGCTCAAGGACAATGCGCTCGCGGCGGCGGTTCAGTTGAAGCCGC
GTGGCACGTTTTCGCAGGCGACGCTCGATTCCGATGTCGAGGCGGTCAAGGCTGCCTACAGGCGCATCGGCCGCGATGAT
GCCGGCGTGACCACGCAGGTCATGGAGCTCGGCGACAACCGCGTGAACGTGGTGTTCCACATCACCGAAGGCGACCGTAC
GCAGATCGCAGCGATCAATTTTGTCGGCAACAGCGCCTATTCGAGCCGCCGTCTGTCGGATGTGATCAACACCAAGCGTT
CGTCCTGGGTGTCGTTCATCCTGCGCGATGACGTCTATGACGAGGACAAGCTGCGGGCCGACCAAGAGCTGCTGCGCCGC
TTCTACTACAATCACGGCTATGCCGATTTCCAGGTCGTGTCGGCCGTTGGCGAGCTCGACAACGCGACGAACAAATACAC
GGTCACCATCACTGTCCAGGAAGGCGAGCGCTATAATTTCGGCGATATCAGCGTCGAAAGCACGATCCCGGAAGTCGACT
CCAAGTCGCTGGAATCGGTGGTTGAGACCCACAAGGGCGACGTCTACAACGCCAAGGATGTCGAGGACTCCATCATCGCG
CTCACCGAGAAGGTGGCTGGTTCAGGCTATGCCTTCGCGCAGGTGACGCCGCGCGGCGATCGCAATTTCGAGAACCATAC
GATTTCGGTGGTCTATACGGTCGACCAGGGCACCAAGGCCTATATCGAGCGCATCGAGATCCGCGGCAATGACCGCACGC
GTGACTATGTCATCCGCCGCGAGTTCGACGTCAGCGAAGGCGATGCGTTCAACCAGGTGCTCATCCAGCGCGCGAAGAAG
CGTCTGGAAGACCTGAATTATTTTGACAAAGTTGAAATCTCGACAGTGCCCGGCTCGCAGCCCGATCAGGTCGTGCTGGT
GGTCGACGTGGTCGAGAAGTCGACCGGTGAATTCTCCGTTGGCGCCGGCTATTCGACCGGCGGTGACTCGGCAGGCCCAT
CCGTCGAAGGCTCGATCACCGAGCGCAACTTCCTCGGTCGCGGCCAGTTCATCAAGCTGTCGGCGGGCGGCGGCAAGAAT
TCACGCGACTACTCCGTATCGTTCACCGAGCCGTATTTCCTCGGACGGCGCATCGCCGCCGGCTTCGACATCTACAAGTC
GACGCGGGAATACAACAACAACTATGACAGCGACACCGTCGGTGCGACGGTGCGCTTCGGCCTGCCGATCACCAACAGCA
TCACGACCCAGTTGGCGTATAATATCTCTCAGGAGAAGTATAAGGTCGACAACAGTTGCGGCCCTACCGACCCTCCGAAT
CCTCCCGGCGGCACCTGCAACATTTCGCAGGCCATCTTGGATGGCATCGCGGAAAGCCCCTGGATCAAGTCTTCGGTCAG
CCTGGGATTGGTCTACAACACCATCGACGACATGAAGAACCCGCATGAGGGTATCTATGCCAACACGACCGTCGAGGTCG
CGGGCGTCGGCGGCGATGCCAAGTTCGTGAAGATCACCGGACGCGGCAGCATCTACCAGACGCTGTCCGAGCAGCTTGAC
CTTGTCGGGCTCATTTCGGGCGGCGCAGGCCATGTCGAGGGTTACGGCAACGACGGCGACCTGCGCATCTTCGATCACTT
CCAGAGCACCGATCGCATGATCCGCGGGTTTGCCTATGGTGGCATCGGCCCGGTTGCTTCCGGCACCAGTGGCGACCATC
TGGGCGGCACAACATATTTCAACGCTTCGGCCGAAGCCCAGTTCCCGCTGCCGGTCATTCCCGAGAGCTTCGGTCTGCGT
GGCGCGGTGTTCGCCGACGCGGCGACGCTTTACGGCAACAAGATTGCTGATCAGACCCTGGTCGATCAGGACTCGACCGG
CATGAAGCTGCGCGCTTCGGTCGGTGTCGGCCTAATGTGGGCATCGCCGTTCGGTCCGATCCGTATCGACTATGCGATCC
CGGTCAGGAAGGAAGCGAGCGACGACGTGCAGGAATTCAACTTCGGCATATCGACCCGCTTCTGA

Upstream 100 bases:

>100_bases
AGCCTTGCGTGTAGGGAAAATCCGGTTAATACGGTAGGGGAAATTACCGCACGTCCGGTTTTCTCGCCGTGGGGACTACG
AGAAAAGGTTATTAAGCCCG

Downstream 100 bases:

>100_bases
TCGGCGGCCAACGATGCTCCCGGATTTTTTGGATCCGGGAGAAATGTTTCGACCTAGCTGGATATAGCTTCTGGAATGAC
CGATCCGGTGTTCTTCGCGC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MKAASKFLSAASAAALSAALVVPGALAVQFVATSAAEAAVVSRVEVSGNQRVDADTIRNYITIKPGKAFSSSDVDAAVKA
LFGTGLFSDVQINQVGSTLVVKVAEYKVVNQVLFQGNKKLKDNALAAAVQLKPRGTFSQATLDSDVEAVKAAYRRIGRDD
AGVTTQVMELGDNRVNVVFHITEGDRTQIAAINFVGNSAYSSRRLSDVINTKRSSWVSFILRDDVYDEDKLRADQELLRR
FYYNHGYADFQVVSAVGELDNATNKYTVTITVQEGERYNFGDISVESTIPEVDSKSLESVVETHKGDVYNAKDVEDSIIA
LTEKVAGSGYAFAQVTPRGDRNFENHTISVVYTVDQGTKAYIERIEIRGNDRTRDYVIRREFDVSEGDAFNQVLIQRAKK
RLEDLNYFDKVEISTVPGSQPDQVVLVVDVVEKSTGEFSVGAGYSTGGDSAGPSVEGSITERNFLGRGQFIKLSAGGGKN
SRDYSVSFTEPYFLGRRIAAGFDIYKSTREYNNNYDSDTVGATVRFGLPITNSITTQLAYNISQEKYKVDNSCGPTDPPN
PPGGTCNISQAILDGIAESPWIKSSVSLGLVYNTIDDMKNPHEGIYANTTVEVAGVGGDAKFVKITGRGSIYQTLSEQLD
LVGLISGGAGHVEGYGNDGDLRIFDHFQSTDRMIRGFAYGGIGPVASGTSGDHLGGTTYFNASAEAQFPLPVIPESFGLR
GAVFADAATLYGNKIADQTLVDQDSTGMKLRASVGVGLMWASPFGPIRIDYAIPVRKEASDDVQEFNFGISTRF

Sequences:

>Translated_794_residues
MKAASKFLSAASAAALSAALVVPGALAVQFVATSAAEAAVVSRVEVSGNQRVDADTIRNYITIKPGKAFSSSDVDAAVKA
LFGTGLFSDVQINQVGSTLVVKVAEYKVVNQVLFQGNKKLKDNALAAAVQLKPRGTFSQATLDSDVEAVKAAYRRIGRDD
AGVTTQVMELGDNRVNVVFHITEGDRTQIAAINFVGNSAYSSRRLSDVINTKRSSWVSFILRDDVYDEDKLRADQELLRR
FYYNHGYADFQVVSAVGELDNATNKYTVTITVQEGERYNFGDISVESTIPEVDSKSLESVVETHKGDVYNAKDVEDSIIA
LTEKVAGSGYAFAQVTPRGDRNFENHTISVVYTVDQGTKAYIERIEIRGNDRTRDYVIRREFDVSEGDAFNQVLIQRAKK
RLEDLNYFDKVEISTVPGSQPDQVVLVVDVVEKSTGEFSVGAGYSTGGDSAGPSVEGSITERNFLGRGQFIKLSAGGGKN
SRDYSVSFTEPYFLGRRIAAGFDIYKSTREYNNNYDSDTVGATVRFGLPITNSITTQLAYNISQEKYKVDNSCGPTDPPN
PPGGTCNISQAILDGIAESPWIKSSVSLGLVYNTIDDMKNPHEGIYANTTVEVAGVGGDAKFVKITGRGSIYQTLSEQLD
LVGLISGGAGHVEGYGNDGDLRIFDHFQSTDRMIRGFAYGGIGPVASGTSGDHLGGTTYFNASAEAQFPLPVIPESFGLR
GAVFADAATLYGNKIADQTLVDQDSTGMKLRASVGVGLMWASPFGPIRIDYAIPVRKEASDDVQEFNFGISTRF
>Mature_794_residues
MKAASKFLSAASAAALSAALVVPGALAVQFVATSAAEAAVVSRVEVSGNQRVDADTIRNYITIKPGKAFSSSDVDAAVKA
LFGTGLFSDVQINQVGSTLVVKVAEYKVVNQVLFQGNKKLKDNALAAAVQLKPRGTFSQATLDSDVEAVKAAYRRIGRDD
AGVTTQVMELGDNRVNVVFHITEGDRTQIAAINFVGNSAYSSRRLSDVINTKRSSWVSFILRDDVYDEDKLRADQELLRR
FYYNHGYADFQVVSAVGELDNATNKYTVTITVQEGERYNFGDISVESTIPEVDSKSLESVVETHKGDVYNAKDVEDSIIA
LTEKVAGSGYAFAQVTPRGDRNFENHTISVVYTVDQGTKAYIERIEIRGNDRTRDYVIRREFDVSEGDAFNQVLIQRAKK
RLEDLNYFDKVEISTVPGSQPDQVVLVVDVVEKSTGEFSVGAGYSTGGDSAGPSVEGSITERNFLGRGQFIKLSAGGGKN
SRDYSVSFTEPYFLGRRIAAGFDIYKSTREYNNNYDSDTVGATVRFGLPITNSITTQLAYNISQEKYKVDNSCGPTDPPN
PPGGTCNISQAILDGIAESPWIKSSVSLGLVYNTIDDMKNPHEGIYANTTVEVAGVGGDAKFVKITGRGSIYQTLSEQLD
LVGLISGGAGHVEGYGNDGDLRIFDHFQSTDRMIRGFAYGGIGPVASGTSGDHLGGTTYFNASAEAQFPLPVIPESFGLR
GAVFADAATLYGNKIADQTLVDQDSTGMKLRASVGVGLMWASPFGPIRIDYAIPVRKEASDDVQEFNFGISTRF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=817, Percent_Identity=28.1517747858017, Blast_Score=253, Evalue=2e-68,
Organism=Drosophila melanogaster, GI45552629, Length=451, Percent_Identity=23.9467849223947, Blast_Score=81, Evalue=3e-15,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 85742; Mature: 85742

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAASKFLSAASAAALSAALVVPGALAVQFVATSAAEAAVVSRVEVSGNQRVDADTIRNY
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCE
ITIKPGKAFSSSDVDAAVKALFGTGLFSDVQINQVGSTLVVKVAEYKVVNQVLFQGNKKL
EEECCCCCCCCCCHHHHHHHHHHCCCCCCEEHHCCCCEEEEEEHHHHHHHHHHHCCCCCC
KDNALAAAVQLKPRGTFSQATLDSDVEAVKAAYRRIGRDDAGVTTQVMELGDNRVNVVFH
CCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE
ITEGDRTQIAAINFVGNSAYSSRRLSDVINTKRSSWVSFILRDDVYDEDKLRADQELLRR
EECCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHEEEEEECCCCCHHHHHHHHHHHHH
FYYNHGYADFQVVSAVGELDNATNKYTVTITVQEGERYNFGDISVESTIPEVDSKSLESV
HHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHH
VETHKGDVYNAKDVEDSIIALTEKVAGSGYAFAQVTPRGDRNFENHTISVVYTVDQGTKA
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCHH
YIERIEIRGNDRTRDYVIRREFDVSEGDAFNQVLIQRAKKRLEDLNYFDKVEISTVPGSQ
EEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDQVVLVVDVVEKSTGEFSVGAGYSTGGDSAGPSVEGSITERNFLGRGQFIKLSAGGGKN
CCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
SRDYSVSFTEPYFLGRRIAAGFDIYKSTREYNNNYDSDTVGATVRFGLPITNSITTQLAY
CCCEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHC
NISQEKYKVDNSCGPTDPPNPPGGTCNISQAILDGIAESPWIKSSVSLGLVYNTIDDMKN
CCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCCC
PHEGIYANTTVEVAGVGGDAKFVKITGRGSIYQTLSEQLDLVGLISGGAGHVEGYGNDGD
CCCCEEECCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
LRIFDHFQSTDRMIRGFAYGGIGPVASGTSGDHLGGTTYFNASAEAQFPLPVIPESFGLR
EEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GAVFADAATLYGNKIADQTLVDQDSTGMKLRASVGVGLMWASPFGPIRIDYAIPVRKEAS
EEHHHHHHHHHCCHHCCCHHCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCCC
DDVQEFNFGISTRF
CCHHHHCCCCCCCC
>Mature Secondary Structure
MKAASKFLSAASAAALSAALVVPGALAVQFVATSAAEAAVVSRVEVSGNQRVDADTIRNY
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHCCE
ITIKPGKAFSSSDVDAAVKALFGTGLFSDVQINQVGSTLVVKVAEYKVVNQVLFQGNKKL
EEECCCCCCCCCCHHHHHHHHHHCCCCCCEEHHCCCCEEEEEEHHHHHHHHHHHCCCCCC
KDNALAAAVQLKPRGTFSQATLDSDVEAVKAAYRRIGRDDAGVTTQVMELGDNRVNVVFH
CCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE
ITEGDRTQIAAINFVGNSAYSSRRLSDVINTKRSSWVSFILRDDVYDEDKLRADQELLRR
EECCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHEEEEEECCCCCHHHHHHHHHHHHH
FYYNHGYADFQVVSAVGELDNATNKYTVTITVQEGERYNFGDISVESTIPEVDSKSLESV
HHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEEECCCCCCCCHHHHHHH
VETHKGDVYNAKDVEDSIIALTEKVAGSGYAFAQVTPRGDRNFENHTISVVYTVDQGTKA
HHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCHH
YIERIEIRGNDRTRDYVIRREFDVSEGDAFNQVLIQRAKKRLEDLNYFDKVEISTVPGSQ
EEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDQVVLVVDVVEKSTGEFSVGAGYSTGGDSAGPSVEGSITERNFLGRGQFIKLSAGGGKN
CCCEEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
SRDYSVSFTEPYFLGRRIAAGFDIYKSTREYNNNYDSDTVGATVRFGLPITNSITTQLAY
CCCEEEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHC
NISQEKYKVDNSCGPTDPPNPPGGTCNISQAILDGIAESPWIKSSVSLGLVYNTIDDMKN
CCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCCC
PHEGIYANTTVEVAGVGGDAKFVKITGRGSIYQTLSEQLDLVGLISGGAGHVEGYGNDGD
CCCCEEECCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
LRIFDHFQSTDRMIRGFAYGGIGPVASGTSGDHLGGTTYFNASAEAQFPLPVIPESFGLR
EEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
GAVFADAATLYGNKIADQTLVDQDSTGMKLRASVGVGLMWASPFGPIRIDYAIPVRKEAS
EEHHHHHHHHHCCHHCCCHHCCCCCCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCCC
DDVQEFNFGISTRF
CCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]