| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470687
Identifier: 13470687
GI number: 13470687
Start: 337916
End: 339253
Strand: Reverse
Name: 13470687
Synonym: mll0463
Alternate gene names: NA
Gene position: 339253-337916 (Counterclockwise)
Preceding gene: 13470688
Following gene: 13470686
Centisome position: 4.82
GC content: 62.03
Gene sequence:
>1338_bases TTGTTTCGTCGCATTCGCGAAGACCTGATCAAAAACCACATGGAGGGTCCGCAGGGCTTCCGCTCCATGCTCGCCGGCTG GGTCGAATGCGGCTTCTGCACCATCGTCGAGGATGAAATTCGGTTCTGGAATGGGTCCAGGATCTACCTTTGCCACTGCA AGGACGAGAAGGACCGTTTCAAATATCAGGGCGCTGAAATCCACGTCCTTCTGATCGACGAGCTGACGCACTTCACAGAG GTGATTTACCGGTTCCTCCGCAACCGCGTGCGCATGGTCGGCATCAAGCTTCCCGCGAAGTACGCCGGCCGCTTCCCGCG CATCCTGTGCGGTGCCAACCCGGGCGGAATCGGTCACCAGTTCGTCAAGGCCACGTTCATCGATGGCGCAACCGCGATGA AGGTCTACACGACCGAGGCCAGCGAAGGCGGCATGCGCCGGCAGTTCATCCCTGCCCAGCTCGAAGACAACCCGAGCATG AACGACAACGACCCCGGCTATGAAAACCGGCTGATGGGTCTGGGATCGGAAAGCCTGGTGCGCGCCATGCGATATGGCGA CTGGGACGTGGTCGAGGGCGCTTATTTCGACAATTTCGAACGTCGCCGGCATGTGGTGAAGCCCTTCACGATCCCGGATC ACTGGATCAGGTTCAGGGCAGGGGATTGGGGCAGTGCAAAGCCTTTCGCGTTCGGCTGGTATGTGGTTGCATCGGACGAC ACGATCATCGCGCCCGGTGTCGTCGTGCCGCGTGGCGCACTGGTCAAATATCGGGAGTGGTACGGGGTCAAAATCGACAA GTCCGGCAAGTTCCTGCCCGACGTCGGCCTGAAGCTGCATGCCGAAGCGGTCGGCGCCGGTGTTCGCCAGCGCGATTACG ACGACATCATCGTTTACGGCGTGCTCGACCCCGCAGCCTTCAGCCAGGATGGTGGCCCCTCGATTGCCGAGCGCATGACG CGGGGAACGACCGGCTCGAATGGTTCGACTTTCCGGCGAGCAGACAACAAGCGAACGGCCGGTCGCGGCGCGATGGGCGG CTGGGATCAGTTACGCGGCCGGCTGACTGGCGACGGAGACGGGCGGCCGATGCTGTTCTTCTTCGACACGTGCATTCACA CCATCCGCACGCTTCCCGCGCTTCAGCACGACGAGGCAAACCCGGAAGACCTCGACACCAAGCAGGAAGACCACGCAGCC GACGAGACGCGATACGCGTGCATGTCGAGGCCGTGGATAGCCAAGAGCAAGGTTCCGGCTCCGCAGGTGCCCGAAGGCCA CATCGCACTGCCCGGCGCGCCTGACGAGGCCGCTGGCAACCGTAGGATTCGCATATGA
Upstream 100 bases:
>100_bases CGAAGCGCTCTATGGCGGGGCTGCGGGTGGCGGCAAATCGCATCTGATGCGCGTCGCCGCGATATTGTGGTGCTCGGAAA TCCCGGGCCTTCAGGTTTAT
Downstream 100 bases:
>100_bases TCGATGACGACCAAGATGCGATCGACACTATCGACGATGCGGTTGATCCGTCGCTGAAACTGAAGTCCTCAAAGGGCTGG CTGAAACTGATCACGGATCA
Product: bacteriophage terminase large subunit-like protein
Products: NA
Alternate protein names: Phage Terminase Large Subunit; Terminase Large Subunit
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MFRRIREDLIKNHMEGPQGFRSMLAGWVECGFCTIVEDEIRFWNGSRIYLCHCKDEKDRFKYQGAEIHVLLIDELTHFTE VIYRFLRNRVRMVGIKLPAKYAGRFPRILCGANPGGIGHQFVKATFIDGATAMKVYTTEASEGGMRRQFIPAQLEDNPSM NDNDPGYENRLMGLGSESLVRAMRYGDWDVVEGAYFDNFERRRHVVKPFTIPDHWIRFRAGDWGSAKPFAFGWYVVASDD TIIAPGVVVPRGALVKYREWYGVKIDKSGKFLPDVGLKLHAEAVGAGVRQRDYDDIIVYGVLDPAAFSQDGGPSIAERMT RGTTGSNGSTFRRADNKRTAGRGAMGGWDQLRGRLTGDGDGRPMLFFFDTCIHTIRTLPALQHDEANPEDLDTKQEDHAA DETRYACMSRPWIAKSKVPAPQVPEGHIALPGAPDEAAGNRRIRI
Sequences:
>Translated_445_residues MFRRIREDLIKNHMEGPQGFRSMLAGWVECGFCTIVEDEIRFWNGSRIYLCHCKDEKDRFKYQGAEIHVLLIDELTHFTE VIYRFLRNRVRMVGIKLPAKYAGRFPRILCGANPGGIGHQFVKATFIDGATAMKVYTTEASEGGMRRQFIPAQLEDNPSM NDNDPGYENRLMGLGSESLVRAMRYGDWDVVEGAYFDNFERRRHVVKPFTIPDHWIRFRAGDWGSAKPFAFGWYVVASDD TIIAPGVVVPRGALVKYREWYGVKIDKSGKFLPDVGLKLHAEAVGAGVRQRDYDDIIVYGVLDPAAFSQDGGPSIAERMT RGTTGSNGSTFRRADNKRTAGRGAMGGWDQLRGRLTGDGDGRPMLFFFDTCIHTIRTLPALQHDEANPEDLDTKQEDHAA DETRYACMSRPWIAKSKVPAPQVPEGHIALPGAPDEAAGNRRIRI >Mature_445_residues MFRRIREDLIKNHMEGPQGFRSMLAGWVECGFCTIVEDEIRFWNGSRIYLCHCKDEKDRFKYQGAEIHVLLIDELTHFTE VIYRFLRNRVRMVGIKLPAKYAGRFPRILCGANPGGIGHQFVKATFIDGATAMKVYTTEASEGGMRRQFIPAQLEDNPSM NDNDPGYENRLMGLGSESLVRAMRYGDWDVVEGAYFDNFERRRHVVKPFTIPDHWIRFRAGDWGSAKPFAFGWYVVASDD TIIAPGVVVPRGALVKYREWYGVKIDKSGKFLPDVGLKLHAEAVGAGVRQRDYDDIIVYGVLDPAAFSQDGGPSIAERMT RGTTGSNGSTFRRADNKRTAGRGAMGGWDQLRGRLTGDGDGRPMLFFFDTCIHTIRTLPALQHDEANPEDLDTKQEDHAA DETRYACMSRPWIAKSKVPAPQVPEGHIALPGAPDEAAGNRRIRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50068; Mature: 50068
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRIREDLIKNHMEGPQGFRSMLAGWVECGFCTIVEDEIRFWNGSRIYLCHCKDEKDRF CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEHHHEEECCCEEEEEECCCCHHHH KYQGAEIHVLLIDELTHFTEVIYRFLRNRVRMVGIKLPAKYAGRFPRILCGANPGGIGHQ EECCCEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCHHHCCCCCEEEECCCCCCCCHH FVKATFIDGATAMKVYTTEASEGGMRRQFIPAQLEDNPSMNDNDPGYENRLMGLGSESLV HHEEEEECCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHEECCCHHHHH RAMRYGDWDVVEGAYFDNFERRRHVVKPFTIPDHWIRFRAGDWGSAKPFAFGWYVVASDD HHHHCCCCCEECCHHHCCHHHHHHCCCCCCCCCHHEEEECCCCCCCCCEEEEEEEEECCC TIIAPGVVVPRGALVKYREWYGVKIDKSGKFLPDVGLKLHAEAVGAGVRQRDYDDIIVYG EEECCCEECCCCCEEEEEEHCCEEECCCCCCCCCCCCEEEHHHHCCCCCCCCCCCEEEEE VLDPAAFSQDGGPSIAERMTRGTTGSNGSTFRRADNKRTAGRGAMGGWDQLRGRLTGDGD EECCHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEECCCCC GRPMLFFFDTCIHTIRTLPALQHDEANPEDLDTKQEDHAADETRYACMSRPWIAKSKVPA CCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCCCCC PQVPEGHIALPGAPDEAAGNRRIRI CCCCCCCEECCCCCCCCCCCCEECC >Mature Secondary Structure MFRRIREDLIKNHMEGPQGFRSMLAGWVECGFCTIVEDEIRFWNGSRIYLCHCKDEKDRF CHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEEHHHEEECCCEEEEEECCCCHHHH KYQGAEIHVLLIDELTHFTEVIYRFLRNRVRMVGIKLPAKYAGRFPRILCGANPGGIGHQ EECCCEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEECCHHHCCCCCEEEECCCCCCCCHH FVKATFIDGATAMKVYTTEASEGGMRRQFIPAQLEDNPSMNDNDPGYENRLMGLGSESLV HHEEEEECCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHEECCCHHHHH RAMRYGDWDVVEGAYFDNFERRRHVVKPFTIPDHWIRFRAGDWGSAKPFAFGWYVVASDD HHHHCCCCCEECCHHHCCHHHHHHCCCCCCCCCHHEEEECCCCCCCCCEEEEEEEEECCC TIIAPGVVVPRGALVKYREWYGVKIDKSGKFLPDVGLKLHAEAVGAGVRQRDYDDIIVYG EEECCCEECCCCCEEEEEEHCCEEECCCCCCCCCCCCEEEHHHHCCCCCCCCCCCEEEEE VLDPAAFSQDGGPSIAERMTRGTTGSNGSTFRRADNKRTAGRGAMGGWDQLRGRLTGDGD EECCHHCCCCCCHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHCCEECCCCC GRPMLFFFDTCIHTIRTLPALQHDEANPEDLDTKQEDHAADETRYACMSRPWIAKSKVPA CCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHCCCCCCCCCCCC PQVPEGHIALPGAPDEAAGNRRIRI CCCCCCCEECCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA