| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470686
Identifier: 13470686
GI number: 13470686
Start: 335535
End: 337919
Strand: Reverse
Name: 13470686
Synonym: mll0462
Alternate gene names: NA
Gene position: 337919-335535 (Counterclockwise)
Preceding gene: 13470687
Following gene: 13470685
Centisome position: 4.8
GC content: 59.92
Gene sequence:
>2385_bases ATGATCGATGACGACCAAGATGCGATCGACACTATCGACGATGCGGTTGATCCGTCGCTGAAACTGAAGTCCTCAAAGGG CTGGCTGAAACTGATCACGGATCAGGAAAAGGCCGGCTATTCGGACTATCAGGAGAAATGCACCAACATCGAGAAGCAGT ATGCCGACCTGGCCAAGCTCGCCAGCGTCACGCGCGACCGACAGTTTCAGATTTTCTGGGCCAACATCGAGGTCTTGAAG CCGTCGATGTATTCCCGGCCACCCGTGCCGGCCATCGTCCCACGGTTTCAGGATCGCAGCCCGATCCCGCGCACCGCTTC TGAGATGCTGGAGAGGTCGGCAGCCGTTGCGCTTCAGCGTGAGGACATCGACAGCGTTATGCGCCAGGTCCGCGATGACC TGGCCATCCTCGCCCGAGGATGCATCTGGGTGCGTTACGAGACCCGGAGCAAGGACAACGACTATACCGAAAAGGTCTGC ATCGACCACAAGAACCGCCGCGATTTCGCACATGATCCGGCTCGCGAGTGGAAGGAAGTCGACTGGGTAGCTGGCGGCGC ATGGATGACGAAAAAGGAAATGCGCAAGCGTTTCCGCAGCACGTCCGGCGATGCCTACATGAACGCCGAGTTTGCTACCC GCAAGGACGACAAGAACAATTCCGACGGCAAGCTGAAGGCTCGCGTCTGGGAAGTGTGGTGCAAGTCGCAGAACAAGGTG GTGTGGGTCTCGCCTGGCGTCGATGTGCTGCTCGACGAGGGCGAACCACATCTGACGCTGGAAGGCTTCTTCCCGTGCCC ACGGCCTGCCTTTGGCACGGTGCAGCGCAACAGCCTGATCCCGGTCCCTGATTTCGTCTTTTACAAGGACCAAATCGAGG AAGTGAACGACATCACGAACCGCATTTCGGCGCTGTCCGATGCGTTGCGCGTTCGTGGTTTCTATCCGGCCGGCGCTGGC GAGATCGGCGATGCCATCGAGGCGGCGCTGAAGTCGACCAACGACCGGCAGATCATGGTGCCGGTCAGCAACTGGGCCAT GCTTGGTGGCAGCGCGAAGGACATGATCGTCTGGCTTCCGCTGGATATGGTGGTGCAGACCATCACCCAGCTTATTCAGC TTCGGAAGCAGTTGATCGAAGATATCTATCAGATCAGCGGCCTTTCCGACATCATGCGCGGCGAGACCAATCCGAACGAG ACGGCGACCGCGCAGAACATCAAGACCCAGTACGGGTCAGTTCGCATCCGCGACCGGCAGGCCGAACTTGTTCGCATTGC GCTCGACACGGTGCGCATCATCGTCGAGATCATGGCCGAGAATTTCAAGCCTGATACTCTGCAGGAAATGAGCCTGATGG AATTGCCGACCGACGCCGACGTGGCGAAAGTCGTCAAGGGATTGGAGAACCAAGCCCAGCAGATCGTCGCCGAGCTTCAG CACGCCAAGACGGACCCCGAAGTCCAGCAGATGGCGCAGCAAAACCCAGATGCTGCCAAGCAGATCATGGACCAGGCGCA GCAGCAGGTTCAGGCGCTCAGCAAACAGGTCGACGACCAGAAAGCCACCGTCACCATTGACCAGGTGATCAAGTTTCTTC GGGACCAGAAGATTCGGGCGTTCAGCCTCGATATCGAGACCGACAGCACAATCCAGCCCGACGAGCAGGCCGAAAAAGCG AGCCGAGCGGAATTCCTGACGGCGCTTGCCGGTGTCCTGGCCCAGCTCGGCCCTATGGTCGAGGCAAGGCCGGAAACGGC ACCTTTCGCGGCCGAATTGCTCAAGTTCGCAATCGCACCCTTCCGTGTCGGCCGCCAGATGGATACCGCGATCGACGAGT TTGCCGACAACATGAAGGCGGCAGCCGCGCAGGCCAAGCCGCCGCCGCCGGATCCTGCGATGCTCAAGGCCCAGGCCGAA ATCCAGGCGTTGCAAGCGAAATCTGAGGCCGAAGCGCAATCGCATGCGCAGGAGCACGCCTACAAGATGCAGACGCTGGC GGCCGAGCGCGACGTGAAGGTGCAGGAAGCGCAGATCCGCGTTGGCAACGAGAATGCCCGACATGCCCGTGACATGCAGG TCAAGGATGCCGACATGCGGTCGAAGCTGGCCGAGGCCGGTTATCCGCCCGACTTCTCGATTGATGGTGCAAACCAGATG AACCAGGCACAGTTTCAGCAGATCATGGCCGAGCTGACCGCCACTCGCGAGCAGTCGGTGCAGCAAGGACAGCAACTCGG CCAAACGCTGGTGCAGGCTCTGCAACTGGTCGTGCAATCCAACCAAGATACGGCAAAAGCTATGATTGCGGCCGCCACGG CGCCCAAGCGCATTGTGCGCGACCATGCGGGCCGTCCGATTGGCGCTGAAACGGTGATGCAATGA
Upstream 100 bases:
>100_bases GGATAGCCAAGAGCAAGGTTCCGGCTCCGCAGGTGCCCGAAGGCCACATCGCACTGCCCGGCGCGCCTGACGAGGCCGCT GGCAACCGTAGGATTCGCAT
Downstream 100 bases:
>100_bases GCGTCATCCTCGCCACGGCGGTCAAGACGGCGGTGTTAACCGCCATCCGCGATCAGGTTGCCGCCGGCTCGCTGGAAATT CTCGATGCCTCCAATGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 794; Mature: 794
Protein sequence:
>794_residues MIDDDQDAIDTIDDAVDPSLKLKSSKGWLKLITDQEKAGYSDYQEKCTNIEKQYADLAKLASVTRDRQFQIFWANIEVLK PSMYSRPPVPAIVPRFQDRSPIPRTASEMLERSAAVALQREDIDSVMRQVRDDLAILARGCIWVRYETRSKDNDYTEKVC IDHKNRRDFAHDPAREWKEVDWVAGGAWMTKKEMRKRFRSTSGDAYMNAEFATRKDDKNNSDGKLKARVWEVWCKSQNKV VWVSPGVDVLLDEGEPHLTLEGFFPCPRPAFGTVQRNSLIPVPDFVFYKDQIEEVNDITNRISALSDALRVRGFYPAGAG EIGDAIEAALKSTNDRQIMVPVSNWAMLGGSAKDMIVWLPLDMVVQTITQLIQLRKQLIEDIYQISGLSDIMRGETNPNE TATAQNIKTQYGSVRIRDRQAELVRIALDTVRIIVEIMAENFKPDTLQEMSLMELPTDADVAKVVKGLENQAQQIVAELQ HAKTDPEVQQMAQQNPDAAKQIMDQAQQQVQALSKQVDDQKATVTIDQVIKFLRDQKIRAFSLDIETDSTIQPDEQAEKA SRAEFLTALAGVLAQLGPMVEARPETAPFAAELLKFAIAPFRVGRQMDTAIDEFADNMKAAAAQAKPPPPDPAMLKAQAE IQALQAKSEAEAQSHAQEHAYKMQTLAAERDVKVQEAQIRVGNENARHARDMQVKDADMRSKLAEAGYPPDFSIDGANQM NQAQFQQIMAELTATREQSVQQGQQLGQTLVQALQLVVQSNQDTAKAMIAAATAPKRIVRDHAGRPIGAETVMQ
Sequences:
>Translated_794_residues MIDDDQDAIDTIDDAVDPSLKLKSSKGWLKLITDQEKAGYSDYQEKCTNIEKQYADLAKLASVTRDRQFQIFWANIEVLK PSMYSRPPVPAIVPRFQDRSPIPRTASEMLERSAAVALQREDIDSVMRQVRDDLAILARGCIWVRYETRSKDNDYTEKVC IDHKNRRDFAHDPAREWKEVDWVAGGAWMTKKEMRKRFRSTSGDAYMNAEFATRKDDKNNSDGKLKARVWEVWCKSQNKV VWVSPGVDVLLDEGEPHLTLEGFFPCPRPAFGTVQRNSLIPVPDFVFYKDQIEEVNDITNRISALSDALRVRGFYPAGAG EIGDAIEAALKSTNDRQIMVPVSNWAMLGGSAKDMIVWLPLDMVVQTITQLIQLRKQLIEDIYQISGLSDIMRGETNPNE TATAQNIKTQYGSVRIRDRQAELVRIALDTVRIIVEIMAENFKPDTLQEMSLMELPTDADVAKVVKGLENQAQQIVAELQ HAKTDPEVQQMAQQNPDAAKQIMDQAQQQVQALSKQVDDQKATVTIDQVIKFLRDQKIRAFSLDIETDSTIQPDEQAEKA SRAEFLTALAGVLAQLGPMVEARPETAPFAAELLKFAIAPFRVGRQMDTAIDEFADNMKAAAAQAKPPPPDPAMLKAQAE IQALQAKSEAEAQSHAQEHAYKMQTLAAERDVKVQEAQIRVGNENARHARDMQVKDADMRSKLAEAGYPPDFSIDGANQM NQAQFQQIMAELTATREQSVQQGQQLGQTLVQALQLVVQSNQDTAKAMIAAATAPKRIVRDHAGRPIGAETVMQ >Mature_794_residues MIDDDQDAIDTIDDAVDPSLKLKSSKGWLKLITDQEKAGYSDYQEKCTNIEKQYADLAKLASVTRDRQFQIFWANIEVLK PSMYSRPPVPAIVPRFQDRSPIPRTASEMLERSAAVALQREDIDSVMRQVRDDLAILARGCIWVRYETRSKDNDYTEKVC IDHKNRRDFAHDPAREWKEVDWVAGGAWMTKKEMRKRFRSTSGDAYMNAEFATRKDDKNNSDGKLKARVWEVWCKSQNKV VWVSPGVDVLLDEGEPHLTLEGFFPCPRPAFGTVQRNSLIPVPDFVFYKDQIEEVNDITNRISALSDALRVRGFYPAGAG EIGDAIEAALKSTNDRQIMVPVSNWAMLGGSAKDMIVWLPLDMVVQTITQLIQLRKQLIEDIYQISGLSDIMRGETNPNE TATAQNIKTQYGSVRIRDRQAELVRIALDTVRIIVEIMAENFKPDTLQEMSLMELPTDADVAKVVKGLENQAQQIVAELQ HAKTDPEVQQMAQQNPDAAKQIMDQAQQQVQALSKQVDDQKATVTIDQVIKFLRDQKIRAFSLDIETDSTIQPDEQAEKA SRAEFLTALAGVLAQLGPMVEARPETAPFAAELLKFAIAPFRVGRQMDTAIDEFADNMKAAAAQAKPPPPDPAMLKAQAE IQALQAKSEAEAQSHAQEHAYKMQTLAAERDVKVQEAQIRVGNENARHARDMQVKDADMRSKLAEAGYPPDFSIDGANQM NQAQFQQIMAELTATREQSVQQGQQLGQTLVQALQLVVQSNQDTAKAMIAAATAPKRIVRDHAGRPIGAETVMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88891; Mature: 88891
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDDQDAIDTIDDAVDPSLKLKSSKGWLKLITDQEKAGYSDYQEKCTNIEKQYADLAKL CCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ASVTRDRQFQIFWANIEVLKPSMYSRPPVPAIVPRFQDRSPIPRTASEMLERSAAVALQR HHHHCCCEEEEEEEEEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH EDIDSVMRQVRDDLAILARGCIWVRYETRSKDNDYTEKVCIDHKNRRDFAHDPAREWKEV HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHH DWVAGGAWMTKKEMRKRFRSTSGDAYMNAEFATRKDDKNNSDGKLKARVWEVWCKSQNKV HHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VWVSPGVDVLLDEGEPHLTLEGFFPCPRPAFGTVQRNSLIPVPDFVFYKDQIEEVNDITN EEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RISALSDALRVRGFYPAGAGEIGDAIEAALKSTNDRQIMVPVSNWAMLGGSAKDMIVWLP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHEECCCCCCEEEEEC LDMVVQTITQLIQLRKQLIEDIYQISGLSDIMRGETNPNETATAQNIKTQYGSVRIRDRQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECHH AELVRIALDTVRIIVEIMAENFKPDTLQEMSLMELPTDADVAKVVKGLENQAQQIVAELQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HAKTDPEVQQMAQQNPDAAKQIMDQAQQQVQALSKQVDDQKATVTIDQVIKFLRDQKIRA HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCCEE FSLDIETDSTIQPDEQAEKASRAEFLTALAGVLAQLGPMVEARPETAPFAAELLKFAIAP EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH FRVGRQMDTAIDEFADNMKAAAAQAKPPPPDPAMLKAQAEIQALQAKSEAEAQSHAQEHA HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKMQTLAAERDVKVQEAQIRVGNENARHARDMQVKDADMRSKLAEAGYPPDFSIDGANQM HHHHHHHHHCCCEEEEHEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC NQAQFQQIMAELTATREQSVQQGQQLGQTLVQALQLVVQSNQDTAKAMIAAATAPKRIVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH DHAGRPIGAETVMQ HCCCCCCCHHHHCC >Mature Secondary Structure MIDDDQDAIDTIDDAVDPSLKLKSSKGWLKLITDQEKAGYSDYQEKCTNIEKQYADLAKL CCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH ASVTRDRQFQIFWANIEVLKPSMYSRPPVPAIVPRFQDRSPIPRTASEMLERSAAVALQR HHHHCCCEEEEEEEEEEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH EDIDSVMRQVRDDLAILARGCIWVRYETRSKDNDYTEKVCIDHKNRRDFAHDPAREWKEV HHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHH DWVAGGAWMTKKEMRKRFRSTSGDAYMNAEFATRKDDKNNSDGKLKARVWEVWCKSQNKV HHCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCE VWVSPGVDVLLDEGEPHLTLEGFFPCPRPAFGTVQRNSLIPVPDFVFYKDQIEEVNDITN EEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH RISALSDALRVRGFYPAGAGEIGDAIEAALKSTNDRQIMVPVSNWAMLGGSAKDMIVWLP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHEECCCCCCEEEEEC LDMVVQTITQLIQLRKQLIEDIYQISGLSDIMRGETNPNETATAQNIKTQYGSVRIRDRQ HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHCCEEEECHH AELVRIALDTVRIIVEIMAENFKPDTLQEMSLMELPTDADVAKVVKGLENQAQQIVAELQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HAKTDPEVQQMAQQNPDAAKQIMDQAQQQVQALSKQVDDQKATVTIDQVIKFLRDQKIRA HCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHHCCCCEE FSLDIETDSTIQPDEQAEKASRAEFLTALAGVLAQLGPMVEARPETAPFAAELLKFAIAP EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHH FRVGRQMDTAIDEFADNMKAAAAQAKPPPPDPAMLKAQAEIQALQAKSEAEAQSHAQEHA HHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKMQTLAAERDVKVQEAQIRVGNENARHARDMQVKDADMRSKLAEAGYPPDFSIDGANQM HHHHHHHHHCCCEEEEHEEEECCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC NQAQFQQIMAELTATREQSVQQGQQLGQTLVQALQLVVQSNQDTAKAMIAAATAPKRIVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH DHAGRPIGAETVMQ HCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA