| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470679
Identifier: 13470679
GI number: 13470679
Start: 329969
End: 330796
Strand: Reverse
Name: 13470679
Synonym: mll0454
Alternate gene names: NA
Gene position: 330796-329969 (Counterclockwise)
Preceding gene: 13470680
Following gene: 13470678
Centisome position: 4.7
GC content: 63.41
Gene sequence:
>828_bases ATGAATGCGCACACGAATTCGCAGGCCAACACGAACGTCACGAACGTCGTTTTCCGCACGCACACGCAGCCCGACGAGGC CGCCAGCAAGAAAGCCGGGCGCCCGATCTTCACGGATATCGAGGTTTGCGACATCACGTTTCCCGCCAACCGGCAGACCA GGGCAACCTTTCCGGCGCATGATGCCGAGCCGAACGCCACCCGCGAAAGCATGGCGAACGGTGGCGGCGTGATGACCTAT GCGCAGGTCTACAATGCGCAGTATCTGGCTTATAAGAGCGGCGTGGCCCAGCCGATGGGCGGCACGCCGCTGTCCGAAGC GCCGTTCCTCACCGAATCCAAGCGTCGCGAACTGAAGGCGCTCAACGTCCACACCGTCGAGGCGCTGGCGTCACTGGACG GCATGCCGCTGAAGCAGCTCGGCATGGGCGGCCGCGAACTGAAGAACCAGGCGGTGGCCTATATCGACAATGCTGCAGGC TCGGCAGACGTGACCAACCTTGCCGCTCAGGTCGCGATCCTGACCCAGCAGTTGGCCGAAGAGCGGCGCATGCGCGAGGA ATTCACCAACGCGGCGCTCGCCAGGCGTGAGCGCATCAAGGCCGGCGAGGAAATCGAAGACGACGAACAGCCGGAGGATG ATGAGCCGGCCGAACTCGAGCCCGAACCGGATGATTTCGAGCCGGTCCTGCCGCCGACGTTCGCAGAGATCGACGCCATG GATGATGAAGCGCTGAAGGTCTACATCGCCAAGGAAACCGGCAGTCGTCCGCGCGGCAATCCAAACCGGGACACCTTGGT CGCTGCGGCCAAGGAACTGGCGTCGTAA
Upstream 100 bases:
>100_bases GCAGGGTCAGATCGTCTAACCCTTCGACACCTTCGACAACCAAGCGGGGCCTTCGGGTCCCGCTTTCGTTTTTGCAACCT CTCAGACAGGAAAAAATCCT
Downstream 100 bases:
>100_bases GCCGCCATGACGATCCTCAGCGTCATCCAGCAGGTATGCCCGGTCATCGGCCTGAATGTGCCGACGGCCGTTTTTTCGGC GACCGACCGCGAACTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MNAHTNSQANTNVTNVVFRTHTQPDEAASKKAGRPIFTDIEVCDITFPANRQTRATFPAHDAEPNATRESMANGGGVMTY AQVYNAQYLAYKSGVAQPMGGTPLSEAPFLTESKRRELKALNVHTVEALASLDGMPLKQLGMGGRELKNQAVAYIDNAAG SADVTNLAAQVAILTQQLAEERRMREEFTNAALARRERIKAGEEIEDDEQPEDDEPAELEPEPDDFEPVLPPTFAEIDAM DDEALKVYIAKETGSRPRGNPNRDTLVAAAKELAS
Sequences:
>Translated_275_residues MNAHTNSQANTNVTNVVFRTHTQPDEAASKKAGRPIFTDIEVCDITFPANRQTRATFPAHDAEPNATRESMANGGGVMTY AQVYNAQYLAYKSGVAQPMGGTPLSEAPFLTESKRRELKALNVHTVEALASLDGMPLKQLGMGGRELKNQAVAYIDNAAG SADVTNLAAQVAILTQQLAEERRMREEFTNAALARRERIKAGEEIEDDEQPEDDEPAELEPEPDDFEPVLPPTFAEIDAM DDEALKVYIAKETGSRPRGNPNRDTLVAAAKELAS >Mature_275_residues MNAHTNSQANTNVTNVVFRTHTQPDEAASKKAGRPIFTDIEVCDITFPANRQTRATFPAHDAEPNATRESMANGGGVMTY AQVYNAQYLAYKSGVAQPMGGTPLSEAPFLTESKRRELKALNVHTVEALASLDGMPLKQLGMGGRELKNQAVAYIDNAAG SADVTNLAAQVAILTQQLAEERRMREEFTNAALARRERIKAGEEIEDDEQPEDDEPAELEPEPDDFEPVLPPTFAEIDAM DDEALKVYIAKETGSRPRGNPNRDTLVAAAKELAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29942; Mature: 29942
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHTNSQANTNVTNVVFRTHTQPDEAASKKAGRPIFTDIEVCDITFPANRQTRATFPAH CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEECCEEEEEECCCCCCCCCCCCCC DAEPNATRESMANGGGVMTYAQVYNAQYLAYKSGVAQPMGGTPLSEAPFLTESKRRELKA CCCCCHHHHHHHCCCCEEEHHHHHCCHHEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH LNVHTVEALASLDGMPLKQLGMGGRELKNQAVAYIDNAAGSADVTNLAAQVAILTQQLAE CCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH ERRMREEFTNAALARRERIKAGEEIEDDEQPEDDEPAELEPEPDDFEPVLPPTFAEIDAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC DDEALKVYIAKETGSRPRGNPNRDTLVAAAKELAS CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MNAHTNSQANTNVTNVVFRTHTQPDEAASKKAGRPIFTDIEVCDITFPANRQTRATFPAH CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEECCEEEEEECCCCCCCCCCCCCC DAEPNATRESMANGGGVMTYAQVYNAQYLAYKSGVAQPMGGTPLSEAPFLTESKRRELKA CCCCCHHHHHHHCCCCEEEHHHHHCCHHEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH LNVHTVEALASLDGMPLKQLGMGGRELKNQAVAYIDNAAGSADVTNLAAQVAILTQQLAE CCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH ERRMREEFTNAALARRERIKAGEEIEDDEQPEDDEPAELEPEPDDFEPVLPPTFAEIDAM HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC DDEALKVYIAKETGSRPRGNPNRDTLVAAAKELAS CCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA