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The map label for this gene is ygfA [H]

Identifier: 13470606

GI number: 13470606

Start: 257669

End: 258262

Strand: Reverse

Name: ygfA [H]

Synonym: mll0364

Alternate gene names: 13470606

Gene position: 258262-257669 (Counterclockwise)

Preceding gene: 13470609

Following gene: 13470604

Centisome position: 3.67

GC content: 64.14

Gene sequence:

>594_bases
ATGCACGAGCTCGATCCGGAATTCCGGGCGCCGCTATCCGACTGGACCGATGTGCGGCGCTGGCGCAAGGCCGAGCGCGA
GCGGTTGATCGGAGCCCGCCTTGCTGTTTCGGCCGACGCGCGAGCAGCCATGTCGCAGCGCATCGCCGAAGGGCTCGACA
CGATCATCGGTGAAATCCGCGGCCGCATGGTCAGCCTTTACTGGCCGTTTCGCGGCGAACCGGATTTGCGACCATGGATG
GCGTCCATCAACGAGCACGGCGGCCGCACGGCGTTGCCCATCGTCGTCGAGAAAGGGCACCCCCTGATCTTCCGTGCCTA
CAAACCGGGCGACCGATTGGAAAAGGGCGTCTGGAACATACCGATTCCGGCCGAGGGCGATCCGGTGCTGCCGGACATCG
TGATCGCGCCGATCGTCGGCATTGATCCGGCAAATTATCGCCTGGGCTATGGCGGCGGCTTCTTCGACCGCACGCTGGCC
GCCATGCCGTTCAAGCCACTGGTCATCGGCGTCGGCTACGAACTGCAGCGCATCGCCACCATCTGTCCGCAGCCGCACGA
CATTCCGATGGATCGAATTGTCACTGAAGCCTGA

Upstream 100 bases:

>100_bases
TGTAGCGAGGTATAGCGTCATCGGACACGCTAAGAGGTGGCACATGGCCAACGATCATGACGACCAGGGTCCGGCACAGT
ATGCCTCGCCTCCCTGCTTC

Downstream 100 bases:

>100_bases
AGCCTGTCGAGAGCAAGGTCAGGCCGGCAAACTCAAGCCATCTCCGGCTTCATCCCCATGGCGGTGCGGTCGACGATTTC
GCGCAAGGCGAAGGACGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MHELDPEFRAPLSDWTDVRRWRKAERERLIGARLAVSADARAAMSQRIAEGLDTIIGEIRGRMVSLYWPFRGEPDLRPWM
ASINEHGGRTALPIVVEKGHPLIFRAYKPGDRLEKGVWNIPIPAEGDPVLPDIVIAPIVGIDPANYRLGYGGGFFDRTLA
AMPFKPLVIGVGYELQRIATICPQPHDIPMDRIVTEA

Sequences:

>Translated_197_residues
MHELDPEFRAPLSDWTDVRRWRKAERERLIGARLAVSADARAAMSQRIAEGLDTIIGEIRGRMVSLYWPFRGEPDLRPWM
ASINEHGGRTALPIVVEKGHPLIFRAYKPGDRLEKGVWNIPIPAEGDPVLPDIVIAPIVGIDPANYRLGYGGGFFDRTLA
AMPFKPLVIGVGYELQRIATICPQPHDIPMDRIVTEA
>Mature_197_residues
MHELDPEFRAPLSDWTDVRRWRKAERERLIGARLAVSADARAAMSQRIAEGLDTIIGEIRGRMVSLYWPFRGEPDLRPWM
ASINEHGGRTALPIVVEKGHPLIFRAYKPGDRLEKGVWNIPIPAEGDPVLPDIVIAPIVGIDPANYRLGYGGGFFDRTLA
AMPFKPLVIGVGYELQRIATICPQPHDIPMDRIVTEA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=174, Percent_Identity=29.8850574712644, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 22055; Mature: 22055

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHELDPEFRAPLSDWTDVRRWRKAERERLIGARLAVSADARAAMSQRIAEGLDTIIGEIR
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHC
GRMVSLYWPFRGEPDLRPWMASINEHGGRTALPIVVEKGHPLIFRAYKPGDRLEKGVWNI
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCHHHHCCCCCC
PIPAEGDPVLPDIVIAPIVGIDPANYRLGYGGGFFDRTLAAMPFKPLVIGVGYELQRIAT
CCCCCCCCCCCHHHHHCEECCCCCCEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHH
ICPQPHDIPMDRIVTEA
HCCCCCCCCHHHHHCCC
>Mature Secondary Structure
MHELDPEFRAPLSDWTDVRRWRKAERERLIGARLAVSADARAAMSQRIAEGLDTIIGEIR
CCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHC
GRMVSLYWPFRGEPDLRPWMASINEHGGRTALPIVVEKGHPLIFRAYKPGDRLEKGVWNI
CCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEEEEECCCHHHHCCCCCC
PIPAEGDPVLPDIVIAPIVGIDPANYRLGYGGGFFDRTLAAMPFKPLVIGVGYELQRIAT
CCCCCCCCCCCHHHHHCEECCCCCCEEEECCCCHHHHHHHHCCCCCEEEECCHHHHHHHH
ICPQPHDIPMDRIVTEA
HCCCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]