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The map label for this gene is secY [H]

Identifier: 13470571

GI number: 13470571

Start: 219149

End: 220489

Strand: Direct

Name: secY [H]

Synonym: mlr0321

Alternate gene names: 13470571

Gene position: 219149-220489 (Clockwise)

Preceding gene: 13470570

Following gene: 13470572

Centisome position: 3.11

GC content: 61.37

Gene sequence:

>1341_bases
ATGGCTTCGGCTGCTGAACAACTAGCTTCGAATCTGAATTTCTCGGCCTTCGCCAAGGCGGAGGACCTGAAGAAACGCAT
CTGGTTCACTATTGGCGCGCTGCTCGTCTACCGCCTCGGCACCTATATCCCGCTTCCCGGAATCAACCCCGACGCCTTCG
CCCAGGCCTTCTCCTCGCAGAGCAAGGGCGTGCTCGGCATGTTCAACATGTTCGCCGGCGGCGCCGTGCAGCGCATGGCG
ATCTTCGCGCTCGGCATCATGCCTTACATCTCGGCCTCCATCATCATGCAGCTGATGACCTCGGTCATTCCGTCGCTGGA
ATCGCTGAAGAAGGAAGGCGAACAGGGCCGCAAGGTCATCAACCAGTACACGCGCTACGGCACCGTGCTTCTGGCACTGG
TGCAGGCCTATGGCATTTCGGTGGGGCTTGAGAACGGCCACGGCATCGTCAATGATCCCGGCATGTTCTTCCGCATCTCG
ACCGTGGTCACGCTGGTCGGCGGCACCATGTTCCTGATGTGGCTCGGTGAGCAGATCACCGCCCGCGGCATCGGCAACGG
CATTTCGCTGATCATCTTCTCAGGTATTGTCGCCGGCCTGCCGCGCGCCATTTCCGGCACGCTGGAGCTTGGCCGCACCG
GCGCCCTGTCGACCGGCCTGATCCTGGCGATCATCGTGCTGGCCATCGTCGTCATCGCGCTCATCGTGTTCTTCGAGCGC
GCCCAGCGTCGCCTGCTGATCCAGTATCCGAAGCGCCAGGTCGGCAACCGGATGTTCCAGGGCGATACCTCGCATCTGCC
GCTGAAGCTCAACACGTCCGGCGTCATCCCGCCGATCTTTGCTTCGTCGCTGCTCCTGCTGCCGGCCACTATCGCCGGCT
TCTCGCAGACCACCAACATGCCCGCCTGGGCGAGCACCATCCTGGCCTCGCTCGGCCACGGCCAGCCGCTCTACATGGCA
TTCTACGCGGCGATGATCGTGTTCTTCGCCTTCTTCTACACAGCGATTGTCTTCAACCCGAAGGACACCGCCGATCAGCT
CAAGAAGCATTCGGGCTTCATCCCGGGCTATCGTCCGGGCGAGCGGACCGCCGATTACATCGATTACGTTCTCACCCGCA
TCACCGTCGTCGGCGCCATTTATCTGGTGCTGGTGTGCCTGCTGCCGGAGTTCCTGATCTCGGCGACTGGCGTACCATTC
TACCTCGGTGGCACATCGCTTCTGATCGTGGTCAGTGTCACGCTCGATACGGTTGCGCAGATTCAGGGCCACCTGATCGC
GCACCAGTATGAAGGCTTGATCAAGAAGTCGAAGCTGCGCGGGGGGAAGAAAGCCAGATGA

Upstream 100 bases:

>100_bases
CGCTTGCATGTTTAGAGCCCGGAGCTTATCTCGTGAGCTTCGGTGAAACGCGCCGCCTGACCTCACGGGCCATCAAGCGT
TACCAAGCGGAGAATCAGGC

Downstream 100 bases:

>100_bases
GGTTGATTTTGCTTGGGCCGCCAGGGGCGGGCAAGGGGACACAAGCACAAAGACTGGTAGAAAAACACGGCATACCCCAG
CTCTCGACGGGAGACATGCT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 446; Mature: 445

Protein sequence:

>446_residues
MASAAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKGVLGMFNMFAGGAVQRMA
IFALGIMPYISASIIMQLMTSVIPSLESLKKEGEQGRKVINQYTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRIS
TVVTLVGGTMFLMWLGEQITARGIGNGISLIIFSGIVAGLPRAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNMPAWASTILASLGHGQPLYMA
FYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPF
YLGGTSLLIVVSVTLDTVAQIQGHLIAHQYEGLIKKSKLRGGKKAR

Sequences:

>Translated_446_residues
MASAAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKGVLGMFNMFAGGAVQRMA
IFALGIMPYISASIIMQLMTSVIPSLESLKKEGEQGRKVINQYTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRIS
TVVTLVGGTMFLMWLGEQITARGIGNGISLIIFSGIVAGLPRAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFER
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNMPAWASTILASLGHGQPLYMA
FYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPF
YLGGTSLLIVVSVTLDTVAQIQGHLIAHQYEGLIKKSKLRGGKKAR
>Mature_445_residues
ASAAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQSKGVLGMFNMFAGGAVQRMAI
FALGIMPYISASIIMQLMTSVIPSLESLKKEGEQGRKVINQYTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRIST
VVTLVGGTMFLMWLGEQITARGIGNGISLIIFSGIVAGLPRAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFERA
QRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNMPAWASTILASLGHGQPLYMAF
YAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPGERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFY
LGGTSLLIVVSVTLDTVAQIQGHLIAHQYEGLIKKSKLRGGKKAR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=423, Percent_Identity=55.7919621749409, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48158; Mature: 48026

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASAAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQ
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
SKGVLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLESLKKEGEQGRKVI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRISTVVTLVGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGIGNGISLIIFSGIVAGLPRAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFER
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNM
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCC
PAWASTILASLGHGQPLYMAFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPG
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
ERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLGGTSLLIVVSVTLDTVAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHHHHHHHHHH
IQGHLIAHQYEGLIKKSKLRGGKKAR
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASAAEQLASNLNFSAFAKAEDLKKRIWFTIGALLVYRLGTYIPLPGINPDAFAQAFSSQ
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC
SKGVLGMFNMFAGGAVQRMAIFALGIMPYISASIIMQLMTSVIPSLESLKKEGEQGRKVI
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQYTRYGTVLLALVQAYGISVGLENGHGIVNDPGMFFRISTVVTLVGGTMFLMWLGEQIT
HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ARGIGNGISLIIFSGIVAGLPRAISGTLELGRTGALSTGLILAIIVLAIVVIALIVFFER
HHCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQRRLLIQYPKRQVGNRMFQGDTSHLPLKLNTSGVIPPIFASSLLLLPATIAGFSQTTNM
HHHHHHHHCCHHHHCCHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCHHCCCC
PAWASTILASLGHGQPLYMAFYAAMIVFFAFFYTAIVFNPKDTADQLKKHSGFIPGYRPG
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
ERTADYIDYVLTRITVVGAIYLVLVCLLPEFLISATGVPFYLGGTSLLIVVSVTLDTVAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEHHHHHHHHHHHH
IQGHLIAHQYEGLIKKSKLRGGKKAR
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]