| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470519
Identifier: 13470519
GI number: 13470519
Start: 175165
End: 175893
Strand: Direct
Name: 13470519
Synonym: mlr0248
Alternate gene names: NA
Gene position: 175165-175893 (Clockwise)
Preceding gene: 13470517
Following gene: 13470522
Centisome position: 2.49
GC content: 61.45
Gene sequence:
>729_bases ATGGTCGCCTCGGTCAAGGATCCAGGAGGTCATCATGTTCAAGCGCATGCTCACTTCCGCTCTCGTAGCCGTTTTCGTCG CCACAGGCGCGCTGGCCGGCACCGTCCAGTCGTCCTCGGCTCACGGCATGCATCATCACCATTATTACTACGACGACGAC TATGGCGACTACTGGTGGTACCACCGCCATCATCACCGTCATCATCACCATGGCAGGGTGGTTATCATCCTTTGATGCCA AGGCCTGTCGCGTGCGAAGGGCGGCCTCGGCCGCCCTTTTGCATTTTCCGTAGGCCCACGGGCAGGAACCCGGCAGCATC TCCGCAAAAAAATCAAAAAAGCCTCGAACCTTTTGCTGCGCCGCAGCGACAGATGATCAAGAGGCGGATGGATCGCCTCG GTCAACGAAGCAAGGAGATCGTCATGTTCAAGCGCACTCTCGTTTCCGCCCTGATCGCCACCACCGTCGCCGGCACCACG CTGGTCGGCACCGTTCAGCCTTCGGCGGCTCATTCGCATCACCACGACCTCGGCATCGGCATCGCCGCCGGCGTCGGCGG GTTCGTCCTTGGCAGCCTGCTTGCCCAGCAGCCCCCGCGTACCGTCTATGTCGACGAAGACGGCGGTTCCTGGCACGTTC GCCGCTGCTTCGATCGCTACTCGAGCTACGATCCGGACTCCGACACCTACATCGGCCGCGACGGCTACAGCCACTATTGC CGGCTCTGA
Upstream 100 bases:
>100_bases CCATTTCACTACTGCCTACTGCCTACTGCCTACGTTCTGAAAAACCTCCTCGACCTTTCGAACCTTTTGACAGGCCGCGC CGACTGATCTCCAGAGGCGA
Downstream 100 bases:
>100_bases GAGGAGACCGTTCAACAACAGAAAAGGGGGCTTACGCGAGCCCCTTTTCGTTGTCTTACAAATACTTACGGTTGCGTGTT CAGGCGGAATCGGAAATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVASVKDPGGHHVQAHAHFRSRSRFRRHRRAGRHRPVVLGSRHASSPLLLRRRLWRLLVVPPPSSPSSSPWQGGYHPLMP RPVACEGRPRPPFCIFRRPTGRNPAASPQKNQKSLEPFAAPQRQMIKRRMDRLGQRSKEIVMFKRTLVSALIATTVAGTT LVGTVQPSAAHSHHHDLGIGIAAGVGGFVLGSLLAQQPPRTVYVDEDGGSWHVRRCFDRYSSYDPDSDTYIGRDGYSHYC RL
Sequences:
>Translated_242_residues MVASVKDPGGHHVQAHAHFRSRSRFRRHRRAGRHRPVVLGSRHASSPLLLRRRLWRLLVVPPPSSPSSSPWQGGYHPLMP RPVACEGRPRPPFCIFRRPTGRNPAASPQKNQKSLEPFAAPQRQMIKRRMDRLGQRSKEIVMFKRTLVSALIATTVAGTT LVGTVQPSAAHSHHHDLGIGIAAGVGGFVLGSLLAQQPPRTVYVDEDGGSWHVRRCFDRYSSYDPDSDTYIGRDGYSHYC RL >Mature_242_residues MVASVKDPGGHHVQAHAHFRSRSRFRRHRRAGRHRPVVLGSRHASSPLLLRRRLWRLLVVPPPSSPSSSPWQGGYHPLMP RPVACEGRPRPPFCIFRRPTGRNPAASPQKNQKSLEPFAAPQRQMIKRRMDRLGQRSKEIVMFKRTLVSALIATTVAGTT LVGTVQPSAAHSHHHDLGIGIAAGVGGFVLGSLLAQQPPRTVYVDEDGGSWHVRRCFDRYSSYDPDSDTYIGRDGYSHYC RL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27066; Mature: 27066
Theoretical pI: Translated: 11.91; Mature: 11.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVASVKDPGGHHVQAHAHFRSRSRFRRHRRAGRHRPVVLGSRHASSPLLLRRRLWRLLVV CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEEEE PPPSSPSSSPWQGGYHPLMPRPVACEGRPRPPFCIFRRPTGRNPAASPQKNQKSLEPFAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCC PQRQMIKRRMDRLGQRSKEIVMFKRTLVSALIATTVAGTTLVGTVQPSAAHSHHHDLGIG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCH IAAGVGGFVLGSLLAQQPPRTVYVDEDGGSWHVRRCFDRYSSYDPDSDTYIGRDGYSHYC HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCHHHC RL CC >Mature Secondary Structure MVASVKDPGGHHVQAHAHFRSRSRFRRHRRAGRHRPVVLGSRHASSPLLLRRRLWRLLVV CCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHEEEEE PPPSSPSSSPWQGGYHPLMPRPVACEGRPRPPFCIFRRPTGRNPAASPQKNQKSLEPFAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCC PQRQMIKRRMDRLGQRSKEIVMFKRTLVSALIATTVAGTTLVGTVQPSAAHSHHHDLGIG CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCH IAAGVGGFVLGSLLAQQPPRTVYVDEDGGSWHVRRCFDRYSSYDPDSDTYIGRDGYSHYC HHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEECCCCCHHHC RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA