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The map label for this gene is omp31 [H]

Identifier: 13470446

GI number: 13470446

Start: 109319

End: 109984

Strand: Reverse

Name: omp31 [H]

Synonym: mll0155

Alternate gene names: 13470446

Gene position: 109984-109319 (Counterclockwise)

Preceding gene: 13470449

Following gene: 13470444

Centisome position: 1.56

GC content: 63.51

Gene sequence:

>666_bases
GTGTATCGCCTTGTGGTCGCAAGTGCCGGTCTTCTTGCCGTCCTGTCCGTGCCGGCTCTCGCAGCCGACCCGACGGTCGA
CGTGCCGATGACCGCGCCCGGCTTCGACTGGACCGGATACTACGCCGGCCTGCAGGCGGGCTATGGCTGGGGCCAGTCCG
ACATCTCAGGAACGGAGGGCGAGCCGTTTTCCGTCTCGCCGGACATAAACGGCGGTTTCGTCGGCGGGCATATCGCCGGG
CTGTGGCAGTTCGACCAGGCCGTGATCGGCGCCGAAGCCGACCTCAACTATTCCTCGGTCAACGGCACGGCCGAAGCGGA
ACCCGGAAACAATTTCGGCACCGACATCAAATGGTTCGGATCGGTCAACGCCAAGGCCGGATACGCGATGGATCGCGTGC
TGGTCTATGGCATAGGCGGCGTTGCCTTTGCCGGGATCGAGACCTCGCAATCGGCGGGCTCCGCTTTCTCCGAGACACGC
GCGAATGTCGGCTGGACCCTGGGCGCCGGCGTCGACTACGCGCTGACCGACAAGTTCGTCGTCGGCGCCCAGTATCGCTA
CTACGATTTCGGCTCCGAACACTATGACGGATCCAGCGACTTCGTCGGCCGCGACCAGGATACCAAGCTGAACACCGTCG
GCATCAATCTCAGCTACAAGTTCTGA

Upstream 100 bases:

>100_bases
ACGGCAAACGGTTGCAGCCAGAAACAGGATTCCGTTTTGTCGTAAATCGGTCTAGCTTGGTCGCCAAGATTTCTTCTGAC
TCTTCGTCCGGGGAGTTCGA

Downstream 100 bases:

>100_bases
GCCTTGCCAACTGCGGTCGCAGAGCGACGGCTGTGACGTAATCCGCGATTTCGATGAGAGGGGCGGCCGGCGCCCCCAGT
GGGCGGGGGAATGGGTTGGG

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MYRLVVASAGLLAVLSVPALAADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISGTEGEPFSVSPDINGGFVGGHIAG
LWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIKWFGSVNAKAGYAMDRVLVYGIGGVAFAGIETSQSAGSAFSETR
ANVGWTLGAGVDYALTDKFVVGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF

Sequences:

>Translated_221_residues
MYRLVVASAGLLAVLSVPALAADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISGTEGEPFSVSPDINGGFVGGHIAG
LWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIKWFGSVNAKAGYAMDRVLVYGIGGVAFAGIETSQSAGSAFSETR
ANVGWTLGAGVDYALTDKFVVGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF
>Mature_221_residues
MYRLVVASAGLLAVLSVPALAADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISGTEGEPFSVSPDINGGFVGGHIAG
LWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIKWFGSVNAKAGYAMDRVLVYGIGGVAFAGIETSQSAGSAFSETR
ANVGWTLGAGVDYALTDKFVVGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLVVASAGLLAVLSVPALAADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISGTEG
CEEEEEECCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCC
EPFSVSPDINGGFVGGHIAGLWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIKWFG
CCEEECCCCCCCEECCCEEEEEEHHHEEECCCCCCCEECCCCEEECCCCCCCCCCEEEEE
SVNAKAGYAMDRVLVYGIGGVAFAGIETSQSAGSAFSETRANVGWTLGAGVDYALTDKFV
CCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHCCCCEEECCCCCEEECCEEE
VGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF
ECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MYRLVVASAGLLAVLSVPALAADPTVDVPMTAPGFDWTGYYAGLQAGYGWGQSDISGTEG
CEEEEEECCCCEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCC
EPFSVSPDINGGFVGGHIAGLWQFDQAVIGAEADLNYSSVNGTAEAEPGNNFGTDIKWFG
CCEEECCCCCCCEECCCEEEEEEHHHEEECCCCCCCEECCCCEEECCCCCCCCCCEEEEE
SVNAKAGYAMDRVLVYGIGGVAFAGIETSQSAGSAFSETRANVGWTLGAGVDYALTDKFV
CCCCCCCCCEEEEEEEECCCEEEECCCCCCCCCCHHHHHHCCCCEEECCCCCEEECCEEE
VGAQYRYYDFGSEHYDGSSDFVGRDQDTKLNTVGINLSYKF
ECCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]