| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hutH [H]
Identifier: 13470444
GI number: 13470444
Start: 106280
End: 107782
Strand: Reverse
Name: hutH [H]
Synonym: mll0151
Alternate gene names: 13470444
Gene position: 107782-106280 (Counterclockwise)
Preceding gene: 13470446
Following gene: 13470442
Centisome position: 1.53
GC content: 63.74
Gene sequence:
>1503_bases ATGACAATAACGATAGATACAAACGCCAGCTGGCGCGACATCGCGCGGGTGAGCGAAGGCGAATCCCTGGCGCTTAGCCA GGCAGCATGGGAGAGGATCGCCTTTGCGCACCAGATCGTCGCGGCCATCGTCGAAAAAGGCATCCGCGCCTATGGCGTCA ATACCGGGGTCGGCGCCTTGGCAAGCAAGGTCGTGGCGCCTGCCCTGCAAAAGAAACTGTCGCGCAATATCATTCGCAGT CACGCCTGCGGCGTAGGTGACCTCGTGCCGAGACGCGGCGTGCGCGCCATCATTGCCGCTCAAGTGGCTAATTTCGCGCA TGGCCGTTCGGGCGTTAGCCCTGCGATCGTCCGCAATTTGCTCACCTTTATCGAGCGCGACTGCGTTCCCGACGTGCCCT CCCGGGGATCGGCCGGGTATTTGACGCACAACGCGCATGTAGCACTGGTCTTGATCGGCGAAGGCAGTGCAACCGTGGCA GGCCGCCCGATGAGCGGGCTCGAGGCGTTGGCTGAAATGGGTCTGGAGCCATTGGAGCTTGGCGCCAAGGAAGGCTTGAG CCTGGTCAACGGCACGGCGTGCGCAACCGGCCTGACAAGCATTGCGGTGCTGCGCGCGGAGCGTTTGTTGGGATGGGCTG ACGCGGCGGCGGCTTTGACGCTCGAAGCCGCGGGCGCGCAAATGCCGGCTTTTGGCGAACAAATCCTGGCGATGAGGCCC TCACCCGGCATTCAGGACGTGGGCAGATCACTGCGCGGCTGGCTTCATGGCAGCGAACTTATCGCGCTGGCCCATGGCAG TCGCACGCAGGACGCACTCAGTCTTCGCGCCGTGCCGCATGTTCATGGCGCCGCCCGGGAGGTGCTGGACCGGTCCTCCG AGCTGGTCGACCGCGAACTGGCTGCCGTCACCGACAATCCCGCGGTATTCGGGTCCTTGAGCGATCCTCAGGTTGTTTCA GAGGCGCATGCGGTAGCGCCCGCCCTCGGGCAGGCCGCCGACGGCCTGACCATCGCCTTGGCTCAGGTGGCCGGAATGAG CGAGCGTCGGATCGATCGTCTCGTCAATCCGCTTGTCAACAATTTGCCGGCCTTCCTTGCCGATGAGGACGGAGCCAATT CCGGCTTCATGATCGCCCAGTACACGGCCACCTCGCTCAGCAACGTCAATCGGCGTCTGGCCGCCCCGGCGGCGACCGAC GGCGGCGTCACATCCGGCCTGCAAGAGGATTTTCTTGCGCATCCAACCGTCGCAGCCAACAAGCTGCTGGCGGTTATCGA CAACGCCGAATACATCCTGGCGATCGAACTCATGGCAGCCGCGCAGGCCCATGATTTTCTGGCGCGGCGCGGTGCCCGCG CGCCTGGTACTGACACCATCTACCAACTGGTCCGGGAAAATATCGCGCACTATTCCGACGATCGGCCTCTGTCCCGGGAT ATGGAAGCCTTGCGCACCTTCATCCGCGAAATGGACGTGCCGGCCTGTCCGCAGCACAGCTAG
Upstream 100 bases:
>100_bases CCCGCTGATGTGCGGTAAGGGGCCGAAGCAGCGGTCTCACGCCGCCTTTCGAGCGAGCCAACAGCGCCTGCGCATTCGCA AAGCTATTTCGGAACGGGCA
Downstream 100 bases:
>100_bases CAAGGCAATACCCAGCGAGCTTCGAGAGACTAGGCCTTCATCGGGTTCAGCTTCAGATGCTGGATCAGGATAATCGTCTT GGCATCGACGATGCGACCGT
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MTITIDTNASWRDIARVSEGESLALSQAAWERIAFAHQIVAAIVEKGIRAYGVNTGVGALASKVVAPALQKKLSRNIIRS HACGVGDLVPRRGVRAIIAAQVANFAHGRSGVSPAIVRNLLTFIERDCVPDVPSRGSAGYLTHNAHVALVLIGEGSATVA GRPMSGLEALAEMGLEPLELGAKEGLSLVNGTACATGLTSIAVLRAERLLGWADAAAALTLEAAGAQMPAFGEQILAMRP SPGIQDVGRSLRGWLHGSELIALAHGSRTQDALSLRAVPHVHGAAREVLDRSSELVDRELAAVTDNPAVFGSLSDPQVVS EAHAVAPALGQAADGLTIALAQVAGMSERRIDRLVNPLVNNLPAFLADEDGANSGFMIAQYTATSLSNVNRRLAAPAATD GGVTSGLQEDFLAHPTVAANKLLAVIDNAEYILAIELMAAAQAHDFLARRGARAPGTDTIYQLVRENIAHYSDDRPLSRD MEALRTFIREMDVPACPQHS
Sequences:
>Translated_500_residues MTITIDTNASWRDIARVSEGESLALSQAAWERIAFAHQIVAAIVEKGIRAYGVNTGVGALASKVVAPALQKKLSRNIIRS HACGVGDLVPRRGVRAIIAAQVANFAHGRSGVSPAIVRNLLTFIERDCVPDVPSRGSAGYLTHNAHVALVLIGEGSATVA GRPMSGLEALAEMGLEPLELGAKEGLSLVNGTACATGLTSIAVLRAERLLGWADAAAALTLEAAGAQMPAFGEQILAMRP SPGIQDVGRSLRGWLHGSELIALAHGSRTQDALSLRAVPHVHGAAREVLDRSSELVDRELAAVTDNPAVFGSLSDPQVVS EAHAVAPALGQAADGLTIALAQVAGMSERRIDRLVNPLVNNLPAFLADEDGANSGFMIAQYTATSLSNVNRRLAAPAATD GGVTSGLQEDFLAHPTVAANKLLAVIDNAEYILAIELMAAAQAHDFLARRGARAPGTDTIYQLVRENIAHYSDDRPLSRD MEALRTFIREMDVPACPQHS >Mature_499_residues TITIDTNASWRDIARVSEGESLALSQAAWERIAFAHQIVAAIVEKGIRAYGVNTGVGALASKVVAPALQKKLSRNIIRSH ACGVGDLVPRRGVRAIIAAQVANFAHGRSGVSPAIVRNLLTFIERDCVPDVPSRGSAGYLTHNAHVALVLIGEGSATVAG RPMSGLEALAEMGLEPLELGAKEGLSLVNGTACATGLTSIAVLRAERLLGWADAAAALTLEAAGAQMPAFGEQILAMRPS PGIQDVGRSLRGWLHGSELIALAHGSRTQDALSLRAVPHVHGAAREVLDRSSELVDRELAAVTDNPAVFGSLSDPQVVSE AHAVAPALGQAADGLTIALAQVAGMSERRIDRLVNPLVNNLPAFLADEDGANSGFMIAQYTATSLSNVNRRLAAPAATDG GVTSGLQEDFLAHPTVAANKLLAVIDNAEYILAIELMAAAQAHDFLARRGARAPGTDTIYQLVRENIAHYSDDRPLSRDM EALRTFIREMDVPACPQHS
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=496, Percent_Identity=36.2903225806452, Blast_Score=263, Evalue=3e-70, Organism=Caenorhabditis elegans, GI17567831, Length=491, Percent_Identity=37.2708757637475, Blast_Score=250, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 52478; Mature: 52347
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITIDTNASWRDIARVSEGESLALSQAAWERIAFAHQIVAAIVEKGIRAYGVNTGVGAL CEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH ASKVVAPALQKKLSRNIIRSHACGVGDLVPRRGVRAIIAAQVANFAHGRSGVSPAIVRNL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LTFIERDCVPDVPSRGSAGYLTHNAHVALVLIGEGSATVAGRPMSGLEALAEMGLEPLEL HHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEECCCCEECCCCHHHHHHHHHCCCCHHHC GAKEGLSLVNGTACATGLTSIAVLRAERLLGWADAAAALTLEAAGAQMPAFGEQILAMRP CHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECC SPGIQDVGRSLRGWLHGSELIALAHGSRTQDALSLRAVPHVHGAAREVLDRSSELVDREL CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AAVTDNPAVFGSLSDPQVVSEAHAVAPALGQAADGLTIALAQVAGMSERRIDRLVNPLVN HHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH NLPAFLADEDGANSGFMIAQYTATSLSNVNRRLAAPAATDGGVTSGLQEDFLAHPTVAAN CCCHHEECCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCCHHHH KLLAVIDNAEYILAIELMAAAQAHDFLARRGARAPGTDTIYQLVRENIAHYSDDRPLSRD HHHHEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH MEALRTFIREMDVPACPQHS HHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TITIDTNASWRDIARVSEGESLALSQAAWERIAFAHQIVAAIVEKGIRAYGVNTGVGAL EEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHH ASKVVAPALQKKLSRNIIRSHACGVGDLVPRRGVRAIIAAQVANFAHGRSGVSPAIVRNL HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LTFIERDCVPDVPSRGSAGYLTHNAHVALVLIGEGSATVAGRPMSGLEALAEMGLEPLEL HHHHHHCCCCCCCCCCCCCEEEECCEEEEEEEECCCCEECCCCHHHHHHHHHCCCCHHHC GAKEGLSLVNGTACATGLTSIAVLRAERLLGWADAAAALTLEAAGAQMPAFGEQILAMRP CHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECC SPGIQDVGRSLRGWLHGSELIALAHGSRTQDALSLRAVPHVHGAAREVLDRSSELVDREL CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH AAVTDNPAVFGSLSDPQVVSEAHAVAPALGQAADGLTIALAQVAGMSERRIDRLVNPLVN HHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH NLPAFLADEDGANSGFMIAQYTATSLSNVNRRLAAPAATDGGVTSGLQEDFLAHPTVAAN CCCHHEECCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHCCCCHHHH KLLAVIDNAEYILAIELMAAAQAHDFLARRGARAPGTDTIYQLVRENIAHYSDDRPLSRD HHHHEECCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH MEALRTFIREMDVPACPQHS HHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]