| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470398
Identifier: 13470398
GI number: 13470398
Start: 66795
End: 67847
Strand: Reverse
Name: 13470398
Synonym: mll0095
Alternate gene names: NA
Gene position: 67847-66795 (Counterclockwise)
Preceding gene: 13470404
Following gene: 13470390
Centisome position: 0.96
GC content: 59.83
Gene sequence:
>1053_bases ATGAGACGCGTCCTTCTCGCAGCGACTGCCTTTCTCTCCCTTACCATATCTGGCCAAGCGGCGCTGGCCGCCGACGACGC TCCCGAAGCACCCTATGTCGACGACCGATCGAGCGCGGAGGCGGTTATTCGCTCGCTCTACAGCGCCATCAACCGGCACG AATTCGCCCGCGCTTGGGGATATTATGGCGATACGAAGCCGGCTAAAGATTTTGACAGCTTCGTCAAGGGTTATGACGGT ACCGACAAGGTGGAAGTCACGACCGGAGCTATTTCGGACGACGGAGCCGCCGGCAGCATCTTCTACAACGTCCCGGTCGC CATCCGTGCCACGGACAAGAGCGGCGGCGAAAAGGTCTTTGCCGGCTGCTACACGCTGCGCCAGGTCAATGCGCAGGCCC AGGCCGCGCCGCCCTTCGATCCTATCCACATCGAAAAGGGGGCGTTGAAACCCTCAACGGCGGATTTCGAGGCGGCGCTG CCGCCAAGCTGCGGCGACGGCCCGCCACCGCCGAAGAAGGATACGGCACTCGAGCAGGCCAGGAAAGCCTTCCTGGCGAC CTATGGCGACCAGTGCGACAAGCAGTTCCTGGGCAATGAGCCGGAGGTATTTTCGATCAAGTACAAGGACAAGGATGCGC GGCCCGGCGATCCCGATAAGGAAGCCCGGCTGTTCCGTTTCTCCTGTTCGGCTGCGGCCTACAATGAAAGTTCGGTCTAC TACATGACCGACGAATTGTCTGAAGTGCGGCAATTGCAGTTCGCCGAACCCAAGATGGACATCCGCTACGAGAACAATAA CAGCGACGGCAAATTGCTGGGCATGAGCATCGTCGGCTTCGAGACGACCGGTTGGGCGGTTAATTCCGACTATGACCCAG ACACCCATACGATCACCACCTTCGACAAGTGGCGAGGCGTCGGCGATGCCTCCGATTCGGGAACCTATCTGTTCCGTAAC GGCGATTTCTCGCTGGTCCAGTATGACGTCGATGCCTCCTATGACGGGCAGGAGAACCCACAGACGGTCGTCGACTACAA CACGGCGCCTTGA
Upstream 100 bases:
>100_bases TAGCGCCTGCGCACACGATTCTTCAAGCGCCGTAGGCACCGCGTCACCACGCCGCCGCAATCGCCGTGGTAGAATTTCCG TTATCGAGCGGAGATTCCCG
Downstream 100 bases:
>100_bases AGGACGTCGGAGCAGCGCCAGTCAAGGCGCCTTCGACAGCATCCAGTTCAGCGTGCTGCGCCAGTCGACCATGCGGATCG GCGTGCCGTGCGTGCCGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRRVLLAATAFLSLTISGQAALAADDAPEAPYVDDRSSAEAVIRSLYSAINRHEFARAWGYYGDTKPAKDFDSFVKGYDG TDKVEVTTGAISDDGAAGSIFYNVPVAIRATDKSGGEKVFAGCYTLRQVNAQAQAAPPFDPIHIEKGALKPSTADFEAAL PPSCGDGPPPPKKDTALEQARKAFLATYGDQCDKQFLGNEPEVFSIKYKDKDARPGDPDKEARLFRFSCSAAAYNESSVY YMTDELSEVRQLQFAEPKMDIRYENNNSDGKLLGMSIVGFETTGWAVNSDYDPDTHTITTFDKWRGVGDASDSGTYLFRN GDFSLVQYDVDASYDGQENPQTVVDYNTAP
Sequences:
>Translated_350_residues MRRVLLAATAFLSLTISGQAALAADDAPEAPYVDDRSSAEAVIRSLYSAINRHEFARAWGYYGDTKPAKDFDSFVKGYDG TDKVEVTTGAISDDGAAGSIFYNVPVAIRATDKSGGEKVFAGCYTLRQVNAQAQAAPPFDPIHIEKGALKPSTADFEAAL PPSCGDGPPPPKKDTALEQARKAFLATYGDQCDKQFLGNEPEVFSIKYKDKDARPGDPDKEARLFRFSCSAAAYNESSVY YMTDELSEVRQLQFAEPKMDIRYENNNSDGKLLGMSIVGFETTGWAVNSDYDPDTHTITTFDKWRGVGDASDSGTYLFRN GDFSLVQYDVDASYDGQENPQTVVDYNTAP >Mature_350_residues MRRVLLAATAFLSLTISGQAALAADDAPEAPYVDDRSSAEAVIRSLYSAINRHEFARAWGYYGDTKPAKDFDSFVKGYDG TDKVEVTTGAISDDGAAGSIFYNVPVAIRATDKSGGEKVFAGCYTLRQVNAQAQAAPPFDPIHIEKGALKPSTADFEAAL PPSCGDGPPPPKKDTALEQARKAFLATYGDQCDKQFLGNEPEVFSIKYKDKDARPGDPDKEARLFRFSCSAAAYNESSVY YMTDELSEVRQLQFAEPKMDIRYENNNSDGKLLGMSIVGFETTGWAVNSDYDPDTHTITTFDKWRGVGDASDSGTYLFRN GDFSLVQYDVDASYDGQENPQTVVDYNTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38190; Mature: 38190
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLLAATAFLSLTISGQAALAADDAPEAPYVDDRSSAEAVIRSLYSAINRHEFARAWG CCEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC YYGDTKPAKDFDSFVKGYDGTDKVEVTTGAISDDGAAGSIFYNVPVAIRATDKSGGEKVF CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEEECCCCCCCEEE AGCYTLRQVNAQAQAAPPFDPIHIEKGALKPSTADFEAALPPSCGDGPPPPKKDTALEQA HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RKAFLATYGDQCDKQFLGNEPEVFSIKYKDKDARPGDPDKEARLFRFSCSAAAYNESSVY HHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE YMTDELSEVRQLQFAEPKMDIRYENNNSDGKLLGMSIVGFETTGWAVNSDYDPDTHTITT EEHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEECCCCCCCCCEEEE FDKWRGVGDASDSGTYLFRNGDFSLVQYDVDASYDGQENPQTVVDYNTAP HHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCC >Mature Secondary Structure MRRVLLAATAFLSLTISGQAALAADDAPEAPYVDDRSSAEAVIRSLYSAINRHEFARAWG CCEEEEEEEEEEEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC YYGDTKPAKDFDSFVKGYDGTDKVEVTTGAISDDGAAGSIFYNVPVAIRATDKSGGEKVF CCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCEEEEECCCCCCCEEE AGCYTLRQVNAQAQAAPPFDPIHIEKGALKPSTADFEAALPPSCGDGPPPPKKDTALEQA HHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RKAFLATYGDQCDKQFLGNEPEVFSIKYKDKDARPGDPDKEARLFRFSCSAAAYNESSVY HHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE YMTDELSEVRQLQFAEPKMDIRYENNNSDGKLLGMSIVGFETTGWAVNSDYDPDTHTITT EEHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEEEEEEECCCEEECCCCCCCCCEEEE FDKWRGVGDASDSGTYLFRNGDFSLVQYDVDASYDGQENPQTVVDYNTAP HHHHCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA