| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470386
Identifier: 13470386
GI number: 13470386
Start: 56401
End: 56919
Strand: Reverse
Name: 13470386
Synonym: mll0080
Alternate gene names: NA
Gene position: 56919-56401 (Counterclockwise)
Preceding gene: 13470387
Following gene: 13470385
Centisome position: 0.81
GC content: 62.62
Gene sequence:
>519_bases GTGACACCGCACGCCGCCATACTCAGCCGCAATTTGAATTTCGTGCGCCGCGCCTTGCCAGGGTGGCGCGCGACACTTTT CGGCTCGCTCTTTTGGGCCGCAACCATGGGCACGAGCGCGCTCATCAACCTGTTGCTGGACAATTGGGTGACACCGGAGA AAATCCGCACCGTGTCGCTGCTGTTTGCCGGCGGCGGCGCGCTGGCCTTTCCGGTCGGCCTGTTCGTGGCACGGCTGGTC TCACTCGGAAGGCGCCGGGAGGTCGCCTTCGCGGCGACAATGGTGTGCCTTGCCGCCGCGACGATCGGGCTGACCGACGG GCTCTATGCCTTGCAATACCGGTCCTATTATGCCGAATGGCATGCACCGGTCTTCACCCTCACCTGGGGGTTTCAACTCG CCTTCACGATGGCGGTGGCGTCCTATCAGTTCATGGTGCTGGGCATCAGGCTCTATTTTCCGCTTGGGTTCATCGCCTTG TTTGCCGCCAGCCTCTGGTTTGCACAGCAGCGGCGTTGA
Upstream 100 bases:
>100_bases TCTCCATGGATAGCCTCAGCGCCTATGCGGTGCTGATCGCGGTGCGCCAATATGGCTTCGAGGGTCCGGACTTCCGCTGG ATCGCCGTGACCGGCCGCCT
Downstream 100 bases:
>100_bases GCATTTTGTCTGTCTCTGTTAGGAGGCGGGCTAACCCAGAGCGGTTTAGCGTTTGGTAGAACCGCCGACCCGCTCTAACT CCTTCTTTTTCGCAATTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MTPHAAILSRNLNFVRRALPGWRATLFGSLFWAATMGTSALINLLLDNWVTPEKIRTVSLLFAGGGALAFPVGLFVARLV SLGRRREVAFAATMVCLAAATIGLTDGLYALQYRSYYAEWHAPVFTLTWGFQLAFTMAVASYQFMVLGIRLYFPLGFIAL FAASLWFAQQRR
Sequences:
>Translated_172_residues MTPHAAILSRNLNFVRRALPGWRATLFGSLFWAATMGTSALINLLLDNWVTPEKIRTVSLLFAGGGALAFPVGLFVARLV SLGRRREVAFAATMVCLAAATIGLTDGLYALQYRSYYAEWHAPVFTLTWGFQLAFTMAVASYQFMVLGIRLYFPLGFIAL FAASLWFAQQRR >Mature_171_residues TPHAAILSRNLNFVRRALPGWRATLFGSLFWAATMGTSALINLLLDNWVTPEKIRTVSLLFAGGGALAFPVGLFVARLVS LGRRREVAFAATMVCLAAATIGLTDGLYALQYRSYYAEWHAPVFTLTWGFQLAFTMAVASYQFMVLGIRLYFPLGFIALF AASLWFAQQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19094; Mature: 18963
Theoretical pI: Translated: 11.24; Mature: 11.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPHAAILSRNLNFVRRALPGWRATLFGSLFWAATMGTSALINLLLDNWVTPEKIRTVSL CCCHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE LFAGGGALAFPVGLFVARLVSLGRRREVAFAATMVCLAAATIGLTDGLYALQYRSYYAEW EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HAPVFTLTWGFQLAFTMAVASYQFMVLGIRLYFPLGFIALFAASLWFAQQRR CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPHAAILSRNLNFVRRALPGWRATLFGSLFWAATMGTSALINLLLDNWVTPEKIRTVSL CCHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE LFAGGGALAFPVGLFVARLVSLGRRREVAFAATMVCLAAATIGLTDGLYALQYRSYYAEW EEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH HAPVFTLTWGFQLAFTMAVASYQFMVLGIRLYFPLGFIALFAASLWFAQQRR CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA