| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470380
Identifier: 13470380
GI number: 13470380
Start: 50603
End: 50923
Strand: Direct
Name: 13470380
Synonym: mlr0071
Alternate gene names: NA
Gene position: 50603-50923 (Clockwise)
Preceding gene: 13470373
Following gene: 13470381
Centisome position: 0.72
GC content: 60.12
Gene sequence:
>321_bases ATGAGCAGCATGAAAGATCGCGAAGAAGGCTTCGAGCGCAAATTTGCATTCGACGAAGAGCTTCGGTTCAAGGCGTCGGC GCGCCGCAACAAGGCGCTCGGGCTGTGGGCCGCCGAAAAGCTCGGAAAGTCGGGTGCCGACGCCGACGCCTATGCGAAGG AAGTCGTCGTTTCCGACATCGAGGAAGCCGGCGATCACGACGTGTTCCGCAAGATCCGCAAGGATTTCGATGCCGCCGGT GTCGAGCAGTCGGACCATCAGATCCGCCGCACCATGGACGAACTGATGGCGCAGGCGATCGAGCAGATCAAGAACACCTG A
Upstream 100 bases:
>100_bases ATATGACGAAGCGTATTGACCGGCTCGCGACCTTTTGGTTTGTGCTTTGGCAACACACATATCTCTTGCCAACGAATCGG ATTTGACCCGGAGGGACGCC
Downstream 100 bases:
>100_bases TCCGGGACGACGCAGGTTTCGCAAAAATGTCCCGGTTTTGCGACGGAACCTGCGGCAAAGGACTGACTGGACCAATCGAC CGCCCGGCCAAGCCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSSMKDREEGFERKFAFDEELRFKASARRNKALGLWAAEKLGKSGADADAYAKEVVVSDIEEAGDHDVFRKIRKDFDAAG VEQSDHQIRRTMDELMAQAIEQIKNT
Sequences:
>Translated_106_residues MSSMKDREEGFERKFAFDEELRFKASARRNKALGLWAAEKLGKSGADADAYAKEVVVSDIEEAGDHDVFRKIRKDFDAAG VEQSDHQIRRTMDELMAQAIEQIKNT >Mature_105_residues SSMKDREEGFERKFAFDEELRFKASARRNKALGLWAAEKLGKSGADADAYAKEVVVSDIEEAGDHDVFRKIRKDFDAAGV EQSDHQIRRTMDELMAQAIEQIKNT
Specific function: Unknown
COG id: COG5467
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12054; Mature: 11922
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMKDREEGFERKFAFDEELRFKASARRNKALGLWAAEKLGKSGADADAYAKEVVVSDI CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EEAGDHDVFRKIRKDFDAAGVEQSDHQIRRTMDELMAQAIEQIKNT HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSMKDREEGFERKFAFDEELRFKASARRNKALGLWAAEKLGKSGADADAYAKEVVVSDI CCCCHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH EEAGDHDVFRKIRKDFDAAGVEQSDHQIRRTMDELMAQAIEQIKNT HHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA