| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is purL
Identifier: 13470370
GI number: 13470370
Start: 42089
End: 44320
Strand: Reverse
Name: purL
Synonym: mll0057
Alternate gene names: 13470370
Gene position: 44320-42089 (Counterclockwise)
Preceding gene: 13470372
Following gene: 13470369
Centisome position: 0.63
GC content: 65.59
Gene sequence:
>2232_bases ATGACCATTTCCAATTCCGTGCCGATCACCCCCGAGCTCATTGCCGCGCATGGGCTGAAGCCAGACGAGTATCAGCGCAT CCTCGATCTCGTTGGGCGCGAACCGAGTTTTACCGAGCTCGGCATTTTCTCGGCGATGTGGAACGAGCACTGCTCCTACA AATCCTCGAAGAAGTGGCTGCGCACACTGCCCACGACGGGGCCACAAGTTATCCAGGGGCCGGGCGAGAATGCCGGCGTG GTCGACATCGGCGACGGCGATTGCGTCGTCTTCAAGATGGAAAGCCACAACCACCCCTCTTTCATCGAGCCCTACCAGGG CGCGGCGACCGGCGTCGGCGGCATTTTGCGCGACGTCTTCACCATGGGCGCACGGCCGATCGCGGCGATGAATGCGCTGC GCTTCGGCGCGCCTGACCACCCCAAGACCAGGCATCTCGTCGCCGGTGTGGTTTCAGGCGTCGGCGGTTACGGCAATTCC TTCGGCGTGCCGACGGTAGGCGGTGAGGTCAACTTCGACGCCCGCTACAACGGCAACATCCTGGTCAACGCCTTCGCCGC CGGCCTCGCCAAGACCAATGCCATCTTCCTGTCGGAAGCCAAGGGCGTCGGCCTGCCGGTCGTCTATCTCGGCGCCAAGA CTGGCCGCGACGGCGTCGGCGGCGCCACCATGGCGTCGGCCGAGTTCGACGACAAGATCGACGAGAAGCGCCCGACCGTG CAGGTCGGCGACCCTTTCACCGAAAAGTGCCTGCTCGAGGCCTGCCTCGAGCTGATGGCATCGGGCGCCGTCATCGCCAT CCAGGACATGGGTGCGGCCGGCCTCACCTGCTCGGCGGTCGAGATGGGCGCCAAGGGCGATCTCGGCATCGAGCTCGACC TCGACAAGGTGCCGGTGCGCGAGGAGCGCATGAGCGCCTATGAGATGATGCTGTCGGAAAGCCAGGAGCGCATGCTGATG GTGCTGCGCCCCGAGAAGGAAAAGGAAGCCGAGGCGATCTTCCACAAATGGGGCCTCGACTTCGCCATTGTCGGCAAGAC CACCGACGATCTGCGTTTTCGCGTGCTGCATCAGGGCGACCAGGTCGCCGATCTGCCGATCAAGGATCTCGGCGACAAGG CGCCGGAATATGACCGCCCCTGGATCGAGCCGAAGAAGCCGGCACCGCTTGCCGCCAACGACATTCCGCAGGCCGATGTC GCGGACGCGCTGCTGAAACTACTCGGCGGACCGGACCTGTCGTCGCGCCGCTGGGTCTGGGAGCAGTATGACACGCTGAT TCAGGGCAATTCGCTGCAGCTTCCCGGCGGCGATGCCGGCGTGGTGCGGGTGGAAGGCCATGCGACCAAAGCGCTCGCCT TCTCCTCGGATGTGACGCCGCGTTATTGCGAAGCCGATCCCTATGAAGGCGGCAAGCAGGCCGTGGCCGAATGCTGGCGC AATCTCACCGCCACCGGCGCGCTGCCGCTGGCCGCGACCGACAACCTCAATTTCGGCAATCCGGAACGGCCCGAGATCAT GGGCCAGCTGGTCGGCGCGGTGAAAGGCATCGGCGACGCCTGCCGCGCGCTCGGCTTCCCGATCGTGTCTGGCAATGTCT CGCTCTACAACGAGACCAACGGCCAGGGCATCCTGCCGACACCGACCATCGGCGGCGTCGGGCTGATCGCCGACTGGTCG AAGATGGTGCGCACCGGTTTTGCCGCGCAAGACCAGATGATCCTGCTGGTCGGCGCGCCCGCCTCCTGGGGCACGCATCT TGGCCAGTCCGTCTATTTCAGGGACATCCATGGCCGCACCGACGGTCCGCCGCCGCCGGTCGACCTCGCGCATGAGAAGC GCGTCGGCGACCACGTGCGCTCGCTGATCGCCTCCGGCATCGTCACCGCGGCGCATGACGTTTCAGATGGCGGTATCGCC GTGGCGCTGGCCGAAATGGCGATGGCGTCGGGCATCGGCGCGACCGTTCCCGGCCTTGTCGGCACCGATCCCATCCCGGT CTGGTTCGGCGAGGATCAGGGCCGCTATCTGCTGACACTGTCGATCGACCCGCATGGCGATGAATGGGACGCCATCCGCA AGCAGCAGGGCGAACTCGGCATCTTCGCGCCGTGGATCGGCTCGACCGGAGGCGATGCGCTGAAGCTCGGCGATGCCAAG GCGATCCCGGTCGGCGATCTGAAGGCCGCCCATGAAGGCTGGTTCCCCCGCTTCATGGACCAGGCCAGTTGA
Upstream 100 bases:
>100_bases CTTTCTGTCTTTTTTCGCTCATCGACGGGTGTATCGGCCGCAAAGCTTGCGATAAGAGGGGACTCAAAATCCCCGCTCCC ATGGACATAAATCGCCGCCC
Downstream 100 bases:
>100_bases GCACACTGGCGGCCCGGGCGCTGCTTGCAGTCGTTTTCTGGCCGTCGCTGTTCTTCTTCTGGTTCCTCGGGCCGTTCGTC TTTTTCCTGTTGTCGACGAC
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MTISNSVPITPELIAAHGLKPDEYQRILDLVGREPSFTELGIFSAMWNEHCSYKSSKKWLRTLPTTGPQVIQGPGENAGV VDIGDGDCVVFKMESHNHPSFIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVSGVGGYGNS FGVPTVGGEVNFDARYNGNILVNAFAAGLAKTNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDDKIDEKRPTV QVGDPFTEKCLLEACLELMASGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMSAYEMMLSESQERMLM VLRPEKEKEAEAIFHKWGLDFAIVGKTTDDLRFRVLHQGDQVADLPIKDLGDKAPEYDRPWIEPKKPAPLAANDIPQADV ADALLKLLGGPDLSSRRWVWEQYDTLIQGNSLQLPGGDAGVVRVEGHATKALAFSSDVTPRYCEADPYEGGKQAVAECWR NLTATGALPLAATDNLNFGNPERPEIMGQLVGAVKGIGDACRALGFPIVSGNVSLYNETNGQGILPTPTIGGVGLIADWS KMVRTGFAAQDQMILLVGAPASWGTHLGQSVYFRDIHGRTDGPPPPVDLAHEKRVGDHVRSLIASGIVTAAHDVSDGGIA VALAEMAMASGIGATVPGLVGTDPIPVWFGEDQGRYLLTLSIDPHGDEWDAIRKQQGELGIFAPWIGSTGGDALKLGDAK AIPVGDLKAAHEGWFPRFMDQAS
Sequences:
>Translated_743_residues MTISNSVPITPELIAAHGLKPDEYQRILDLVGREPSFTELGIFSAMWNEHCSYKSSKKWLRTLPTTGPQVIQGPGENAGV VDIGDGDCVVFKMESHNHPSFIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVSGVGGYGNS FGVPTVGGEVNFDARYNGNILVNAFAAGLAKTNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDDKIDEKRPTV QVGDPFTEKCLLEACLELMASGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMSAYEMMLSESQERMLM VLRPEKEKEAEAIFHKWGLDFAIVGKTTDDLRFRVLHQGDQVADLPIKDLGDKAPEYDRPWIEPKKPAPLAANDIPQADV ADALLKLLGGPDLSSRRWVWEQYDTLIQGNSLQLPGGDAGVVRVEGHATKALAFSSDVTPRYCEADPYEGGKQAVAECWR NLTATGALPLAATDNLNFGNPERPEIMGQLVGAVKGIGDACRALGFPIVSGNVSLYNETNGQGILPTPTIGGVGLIADWS KMVRTGFAAQDQMILLVGAPASWGTHLGQSVYFRDIHGRTDGPPPPVDLAHEKRVGDHVRSLIASGIVTAAHDVSDGGIA VALAEMAMASGIGATVPGLVGTDPIPVWFGEDQGRYLLTLSIDPHGDEWDAIRKQQGELGIFAPWIGSTGGDALKLGDAK AIPVGDLKAAHEGWFPRFMDQAS >Mature_742_residues TISNSVPITPELIAAHGLKPDEYQRILDLVGREPSFTELGIFSAMWNEHCSYKSSKKWLRTLPTTGPQVIQGPGENAGVV DIGDGDCVVFKMESHNHPSFIEPYQGAATGVGGILRDVFTMGARPIAAMNALRFGAPDHPKTRHLVAGVVSGVGGYGNSF GVPTVGGEVNFDARYNGNILVNAFAAGLAKTNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDDKIDEKRPTVQ VGDPFTEKCLLEACLELMASGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVREERMSAYEMMLSESQERMLMV LRPEKEKEAEAIFHKWGLDFAIVGKTTDDLRFRVLHQGDQVADLPIKDLGDKAPEYDRPWIEPKKPAPLAANDIPQADVA DALLKLLGGPDLSSRRWVWEQYDTLIQGNSLQLPGGDAGVVRVEGHATKALAFSSDVTPRYCEADPYEGGKQAVAECWRN LTATGALPLAATDNLNFGNPERPEIMGQLVGAVKGIGDACRALGFPIVSGNVSLYNETNGQGILPTPTIGGVGLIADWSK MVRTGFAAQDQMILLVGAPASWGTHLGQSVYFRDIHGRTDGPPPPVDLAHEKRVGDHVRSLIASGIVTAAHDVSDGGIAV ALAEMAMASGIGATVPGLVGTDPIPVWFGEDQGRYLLTLSIDPHGDEWDAIRKQQGELGIFAPWIGSTGGDALKLGDAKA IPVGDLKAAHEGWFPRFMDQAS
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=635, Percent_Identity=24.8818897637795, Blast_Score=100, Evalue=4e-21, Organism=Escherichia coli, GI48994899, Length=763, Percent_Identity=25.9501965923984, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17553022, Length=674, Percent_Identity=22.4035608308605, Blast_Score=98, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6321498, Length=733, Percent_Identity=24.5566166439291, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI24582111, Length=461, Percent_Identity=25.3796095444685, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24582109, Length=461, Percent_Identity=25.3796095444685, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI17137292, Length=461, Percent_Identity=25.3796095444685, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_RHILO (Q98NN7)
Other databases:
- EMBL: BA000012 - RefSeq: NP_101938.1 - ProteinModelPortal: Q98NN7 - SMR: Q98NN7 - GeneID: 1224601 - GenomeReviews: BA000012_GR - KEGG: mlo:mll0057 - NMPDR: fig|266835.1.peg.43 - HOGENOM: HBG311214 - OMA: YGNSFGV - ProtClustDB: PRK01213 - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 78927; Mature: 78796
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISNSVPITPELIAAHGLKPDEYQRILDLVGREPSFTELGIFSAMWNEHCSYKSSKKWL CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH RTLPTTGPQVIQGPGENAGVVDIGDGDCVVFKMESHNHPSFIEPYQGAATGVGGILRDVF HHCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGAPDHPKTRHLVAGVVSGVGGYGNSFGVPTVGGEVNFDARYNGNI HHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCE LVNAFAAGLAKTNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDDKIDEKRPTV EEEEHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHCCCCEE QVGDPFTEKCLLEACLELMASGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHCCCCCCCEEEEECCCCCCH EERMSAYEMMLSESQERMLMVLRPEKEKEAEAIFHKWGLDFAIVGKTTDDLRFRVLHQGD HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCC QVADLPIKDLGDKAPEYDRPWIEPKKPAPLAANDIPQADVADALLKLLGGPDLSSRRWVW CEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHH EQYDTLIQGNSLQLPGGDAGVVRVEGHATKALAFSSDVTPRYCEADPYEGGKQAVAECWR HHHHHHHCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH NLTATGALPLAATDNLNFGNPERPEIMGQLVGAVKGIGDACRALGFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GQGILPTPTIGGVGLIADWSKMVRTGFAAQDQMILLVGAPASWGTHLGQSVYFRDIHGRT CCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEEEEEEECCCC DGPPPPVDLAHEKRVGDHVRSLIASGIVTAAHDVSDGGIAVALAEMAMASGIGATVPGLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GTDPIPVWFGEDQGRYLLTLSIDPHGDEWDAIRKQQGELGIFAPWIGSTGGDALKLGDAK CCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCC AIPVGDLKAAHEGWFPRFMDQAS CCCCCCCHHHHCCCCHHHHHCCC >Mature Secondary Structure TISNSVPITPELIAAHGLKPDEYQRILDLVGREPSFTELGIFSAMWNEHCSYKSSKKWL CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHH RTLPTTGPQVIQGPGENAGVVDIGDGDCVVFKMESHNHPSFIEPYQGAATGVGGILRDVF HHCCCCCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH TMGARPIAAMNALRFGAPDHPKTRHLVAGVVSGVGGYGNSFGVPTVGGEVNFDARYNGNI HHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECEEECCCE LVNAFAAGLAKTNAIFLSEAKGVGLPVVYLGAKTGRDGVGGATMASAEFDDKIDEKRPTV EEEEHHHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHCCCCEE QVGDPFTEKCLLEACLELMASGAVIAIQDMGAAGLTCSAVEMGAKGDLGIELDLDKVPVR EECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHHHCCCCCCCEEEEECCCCCCH EERMSAYEMMLSESQERMLMVLRPEKEKEAEAIFHKWGLDFAIVGKTTDDLRFRVLHQGD HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCC QVADLPIKDLGDKAPEYDRPWIEPKKPAPLAANDIPQADVADALLKLLGGPDLSSRRWVW CEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHH EQYDTLIQGNSLQLPGGDAGVVRVEGHATKALAFSSDVTPRYCEADPYEGGKQAVAECWR HHHHHHHCCCEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH NLTATGALPLAATDNLNFGNPERPEIMGQLVGAVKGIGDACRALGFPIVSGNVSLYNETN CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GQGILPTPTIGGVGLIADWSKMVRTGFAAQDQMILLVGAPASWGTHLGQSVYFRDIHGRT CCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHCCCEEEEEEECCCC DGPPPPVDLAHEKRVGDHVRSLIASGIVTAAHDVSDGGIAVALAEMAMASGIGATVPGLV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC GTDPIPVWFGEDQGRYLLTLSIDPHGDEWDAIRKQQGELGIFAPWIGSTGGDALKLGDAK CCCCCEEEECCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCC AIPVGDLKAAHEGWFPRFMDQAS CCCCCCCHHHHCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968