| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13470369
Identifier: 13470369
GI number: 13470369
Start: 41568
End: 41918
Strand: Reverse
Name: 13470369
Synonym: mll0056
Alternate gene names: NA
Gene position: 41918-41568 (Counterclockwise)
Preceding gene: 13470370
Following gene: 13470368
Centisome position: 0.6
GC content: 61.82
Gene sequence:
>351_bases ATGCTGGTGCTGCAGAACCTCATCTATGCGGTTCCGATCGTCTGTCTGGTGTTCTGGAACCGGCTTCTGCCGGACCCGGC ACGGGCAAACCGGATCGTCACCTGCATCAAGCTCTTCGCCGTCGCGGCCGTTCTGGGCGCCTTGTGGGAATATGGCTCGT CGCTTGTCTGCGACGGCTATGGCCAACCGTTCTTCTCGCCCGTCTGGCAGATCACCAGCTACCTGCCGATCGCCGATCTT GCGGTCAACATCCCCCTCTATATCCTGGTTTTCAGCCTTGGCCGCACCTTCTCGATGCGCGAAGACGACCCCGCGGCCGA TGCGGTCGATCCGGGCACGAACGCATCCTAG
Upstream 100 bases:
>100_bases GCCGTTCGTCTTTTTCCTGTTGTCGACGACCTCGAGCGAGGTTTGCCCGCGGCTGGAAACGCGCGCCGAGTTCCTTGACG CGGCCAACGGCACGCTGCCG
Downstream 100 bases:
>100_bases GCGACAATCGCGCCGACGGCGGACGGAACGGCTTCAATCGCGGCCGGAAAGGCTTTAGGTTTACCCCGACTCTCATCGCA CGGGCGGCCACACCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MLVLQNLIYAVPIVCLVFWNRLLPDPARANRIVTCIKLFAVAAVLGALWEYGSSLVCDGYGQPFFSPVWQITSYLPIADL AVNIPLYILVFSLGRTFSMREDDPAADAVDPGTNAS
Sequences:
>Translated_116_residues MLVLQNLIYAVPIVCLVFWNRLLPDPARANRIVTCIKLFAVAAVLGALWEYGSSLVCDGYGQPFFSPVWQITSYLPIADL AVNIPLYILVFSLGRTFSMREDDPAADAVDPGTNAS >Mature_116_residues MLVLQNLIYAVPIVCLVFWNRLLPDPARANRIVTCIKLFAVAAVLGALWEYGSSLVCDGYGQPFFSPVWQITSYLPIADL AVNIPLYILVFSLGRTFSMREDDPAADAVDPGTNAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12722; Mature: 12722
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLQNLIYAVPIVCLVFWNRLLPDPARANRIVTCIKLFAVAAVLGALWEYGSSLVCDGY CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GQPFFSPVWQITSYLPIADLAVNIPLYILVFSLGRTFSMREDDPAADAVDPGTNAS CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVLQNLIYAVPIVCLVFWNRLLPDPARANRIVTCIKLFAVAAVLGALWEYGSSLVCDGY CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC GQPFFSPVWQITSYLPIADLAVNIPLYILVFSLGRTFSMREDDPAADAVDPGTNAS CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA