| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13470339
Identifier: 13470339
GI number: 13470339
Start: 10632
End: 11366
Strand: Direct
Name: 13470339
Synonym: mlr0012
Alternate gene names: NA
Gene position: 10632-11366 (Clockwise)
Preceding gene: 13470338
Following gene: 13470342
Centisome position: 0.15
GC content: 63.81
Gene sequence:
>735_bases ATGCGGATCGTGAGAGGGCGCTTTGCCGCTCGTCCCGCGCGTTACCCGAACATTGCATGGCCGGTATGGGGCCTGGTTTG GCTGTTGCTGACGGCGGTGGCATTCGTTCGCCTGGATACACCGGCAGGGATGGTCCATGGCCAATGGTCGGGAGCCGGGC TGGCCGAGTTCCTGACCCAGTTCGCTCTCGGTGGCTGGTACCTGATCCCGTCGGCGCTTTTGCTCGTCGCGGCCAATCTG ACCGATTGGCGCGGCCTTTCACGGCGATCGCTGATGCTCGTCTACAACTGGACTTGCCTGGCTTTTCTGGTGCTGAGCGC CGTTGGCCTGTCGGGTCTGCTGGTCAATGTGCTGAAATATGCGATCGGCCGGGCCCGCCCGCTCTACTTCCAGGATTTTG GTGTGCTCGCCCTGCATCCCTTCGCCTTTGACGCGCGCTTCGCCGGCTTTCCATCCGGCCATGCCACGACGATGGGGGCG GTGTTCGGCGTTCTCCTGCTTTTGTTTCCGCGGCGTTGGCACATCGCCTTGGTGGTCACCGCCTGTCTCGCCTCGACCAG GGTTTTCGTCGGCGCGCACTATCCGAGCGATACGGTGGCCGGCTTCGGCCTTGGCTGCGCCTTCGCGCTGGCTTGCGGGC TGGTCTTTGCCCGGCTCGGCTTCATCTTCCGTGCGACGCCGTCGGGGTTGCCGGTCCGCAAAGCATCGTTCCGGTTGATT GCCCCGCAAAAATAA
Upstream 100 bases:
>100_bases CAATGGGGTCGAATTCCCAATGCTCGTAAAATCGCGCCCTTCCGTTTCCAGTCGGCTCCTTGGGGTGGGGCGCCGATCCC TGAGCAATTTTCACGACACC
Downstream 100 bases:
>100_bases GTCGTTGCCGGATTAATTGCTGTCCAGGCCGCCGTAGGACCTTACCAGGCGAGCCATGTCGGATGCGTCGGCGACTTCGC TTTCCAGCCCCTGTGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase Protein; Lipid A 1-Phosphatase Protein; Transmembrane Lipid A 1-Phosphatase
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRIVRGRFAARPARYPNIAWPVWGLVWLLLTAVAFVRLDTPAGMVHGQWSGAGLAEFLTQFALGGWYLIPSALLLVAANL TDWRGLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKYAIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGA VFGVLLLLFPRRWHIALVVTACLASTRVFVGAHYPSDTVAGFGLGCAFALACGLVFARLGFIFRATPSGLPVRKASFRLI APQK
Sequences:
>Translated_244_residues MRIVRGRFAARPARYPNIAWPVWGLVWLLLTAVAFVRLDTPAGMVHGQWSGAGLAEFLTQFALGGWYLIPSALLLVAANL TDWRGLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKYAIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGA VFGVLLLLFPRRWHIALVVTACLASTRVFVGAHYPSDTVAGFGLGCAFALACGLVFARLGFIFRATPSGLPVRKASFRLI APQK >Mature_244_residues MRIVRGRFAARPARYPNIAWPVWGLVWLLLTAVAFVRLDTPAGMVHGQWSGAGLAEFLTQFALGGWYLIPSALLLVAANL TDWRGLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKYAIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGA VFGVLLLLFPRRWHIALVVTACLASTRVFVGAHYPSDTVAGFGLGCAFALACGLVFARLGFIFRATPSGLPVRKASFRLI APQK
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26542; Mature: 26542
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVRGRFAARPARYPNIAWPVWGLVWLLLTAVAFVRLDTPAGMVHGQWSGAGLAEFLTQ CCEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHH FALGGWYLIPSALLLVAANLTDWRGLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKY HHHCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGAVFGVLLLLFPRRWHIALVVT HHCCCCCCEEECCCEEEECCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ACLASTRVFVGAHYPSDTVAGFGLGCAFALACGLVFARLGFIFRATPSGLPVRKASFRLI HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE APQK CCCC >Mature Secondary Structure MRIVRGRFAARPARYPNIAWPVWGLVWLLLTAVAFVRLDTPAGMVHGQWSGAGLAEFLTQ CCEECCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHH FALGGWYLIPSALLLVAANLTDWRGLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKY HHHCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH AIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGAVFGVLLLLFPRRWHIALVVT HHCCCCCCEEECCCEEEECCHHHCCHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH ACLASTRVFVGAHYPSDTVAGFGLGCAFALACGLVFARLGFIFRATPSGLPVRKASFRLI HHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE APQK CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA