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The map label for this gene is gidB [H]

Identifier: 134302726

GI number: 134302726

Start: 1809297

End: 1809914

Strand: Direct

Name: gidB [H]

Synonym: FTW_1928

Alternate gene names: 134302726

Gene position: 1809297-1809914 (Clockwise)

Preceding gene: 134302724

Following gene: 134302727

Centisome position: 95.3

GC content: 31.23

Gene sequence:

>618_bases
ATGGATATTATGAAAGATAAAATTAGACAAGCTTTATCTGAGCTTGATATTTTAGCAACTGAAGTGCAGATTGACCAATG
GCTAGATTATCTAAAGCTTCTTGAAAAATGGAATAAAGTATACAATATGACCGCTATCAAAAATATTGATGAGATGCTAG
TCAAGCATTTATTTGATAGTCTAGCGGTTGCTAAATATATCAAAGGTGACTCAACTGTAGATGTTGGTACTGGAGGAGGT
TTGCCAGGAGTTGTTTTAGCGATATTATATCCTCAACATCAGTTTACCCTTGTTGATAGTGTTGGTAAGAAAATTATGTT
TCTTAAAAATGTCAAAAAAAGCTTAAGTTTGAATAATATCAACCCTCTAAATACAAGAATTGAAAACCTAGAAGGTAACT
TTGATAATATTATCTCGCGTGCATTTAGCTCGGTTGATACCTTTTATGAGCTTTGTAAACATTTCTTAACAGAACATAAC
CAAATGTTAGCAATGAAAGGTCGAGATTTAGAGGAGCGAAACTTAGAATCTTTGCATTTAAATATTGAGAAATATAGTAT
AAAAGTTCCTTTCTTAAATGCTGAGAGAAATCTTATTGTAATAAGGAAGAAATTATGA

Upstream 100 bases:

>100_bases
TATTAATTTGTGTTAAAGTTGGAGTTTAAAATCACAACTCTATCTTTTAAAGCTTATAATATAGTTATTATAGCTTATAT
AAGATTGTTATTTCTATAAA

Downstream 100 bases:

>100_bases
TTGATAAAGAATTTATCCAAAAATCATATACTAGTATTATGCAAAATATAGACTCAAAGGCTAGGCTTTTGGCTGTTAGT
AAATATCAGTCTATAGATAA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDSTVDVGTGGG
LPGVVLAILYPQHQFTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTEHN
QMLAMKGRDLEERNLESLHLNIEKYSIKVPFLNAERNLIVIRKKL

Sequences:

>Translated_205_residues
MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDSTVDVGTGGG
LPGVVLAILYPQHQFTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTEHN
QMLAMKGRDLEERNLESLHLNIEKYSIKVPFLNAERNLIVIRKKL
>Mature_205_residues
MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDSLAVAKYIKGDSTVDVGTGGG
LPGVVLAILYPQHQFTLVDSVGKKIMFLKNVKKSLSLNNINPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTEHN
QMLAMKGRDLEERNLESLHLNIEKYSIKVPFLNAERNLIVIRKKL

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA [H]

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family [H]

Homologues:

Organism=Escherichia coli, GI1790179, Length=207, Percent_Identity=40.0966183574879, Blast_Score=168, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003682 [H]

Pfam domain/function: PF02527 GidB [H]

EC number: =2.1.1.170 [H]

Molecular weight: Translated: 23582; Mature: 23582

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVAKYIKGDSTVDVGTGGGLPGVVLAILYPQHQFTLVDSVGKKIMFLKNVKKSLSLNNI
HHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTEHNQMLAMKGRDLEERNLESLHL
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHEE
NIEKYSIKVPFLNAERNLIVIRKKL
EEEHEEEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MDIMKDKIRQALSELDILATEVQIDQWLDYLKLLEKWNKVYNMTAIKNIDEMLVKHLFDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAVAKYIKGDSTVDVGTGGGLPGVVLAILYPQHQFTLVDSVGKKIMFLKNVKKSLSLNNI
HHHHHHHCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
NPLNTRIENLEGNFDNIISRAFSSVDTFYELCKHFLTEHNQMLAMKGRDLEERNLESLHL
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHEE
NIEKYSIKVPFLNAERNLIVIRKKL
EEEHEEEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA