Click here to switch to the map view.

The map label for this gene is yajC [H]

Identifier: 134302106

GI number: 134302106

Start: 1087669

End: 1088025

Strand: Reverse

Name: yajC [H]

Synonym: FTW_1148

Alternate gene names: 134302106

Gene position: 1088025-1087669 (Counterclockwise)

Preceding gene: 134302107

Following gene: 134302105

Centisome position: 57.31

GC content: 34.45

Gene sequence:

>357_bases
ATGAGAAAATTATTATTGTCACTATCTGCAATCGTATTATTTGTGTCAACTTCATTTGCACAAGGAGCAGAGCAAGCTGC
TGGTAGTCCGTTAAGCTCAATCTTAATGCTAGTGGTATTTTTTGCTATATTCTGGTTCCTATTAATCAGACCTCAACAAA
AGAAAAACAAAGAATTGCGTAAGATGCTATCTGAGCTATCAAAAGGTGATGAGGTTGTAACTAACGGTGGAATGGTAGGC
AAAATCGCTAAGATAGATGAAACATTTGTAGATTTAGAAGTTGCAGATAATGTTACTGTTAAGATTCAAAGAAATGCTGT
AGCAAATATTTTACCTAAAGGTGCTACTAAAGCTTAA

Upstream 100 bases:

>100_bases
GGAGATACTTTTATCAGTTTATTACTGGTGTTTAATTGATAAAGCATTACTACTAAGGTAAAATTCCTACGTTTAAAATT
TAAAATCCTTAGGAGATAAA

Downstream 100 bases:

>100_bases
TTAGCTATTCTACGAAATCTTTTTAATTTTTTTCTTTTTATTTAAAGGAATTTTCAATGAGTAACAACAGAAGTTTACCT
ATAAATCAGTTTCCGCTGTG

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MRKLLLSLSAIVLFVSTSFAQGAEQAAGSPLSSILMLVVFFAIFWFLLIRPQQKKNKELRKMLSELSKGDEVVTNGGMVG
KIAKIDETFVDLEVADNVTVKIQRNAVANILPKGATKA

Sequences:

>Translated_118_residues
MRKLLLSLSAIVLFVSTSFAQGAEQAAGSPLSSILMLVVFFAIFWFLLIRPQQKKNKELRKMLSELSKGDEVVTNGGMVG
KIAKIDETFVDLEVADNVTVKIQRNAVANILPKGATKA
>Mature_118_residues
MRKLLLSLSAIVLFVSTSFAQGAEQAAGSPLSSILMLVVFFAIFWFLLIRPQQKKNKELRKMLSELSKGDEVVTNGGMVG
KIAKIDETFVDLEVADNVTVKIQRNAVANILPKGATKA

Specific function: Unknown

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=107, Percent_Identity=47.6635514018692, Blast_Score=109, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 12865; Mature: 12865

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLLSLSAIVLFVSTSFAQGAEQAAGSPLSSILMLVVFFAIFWFLLIRPQQKKNKELR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KMLSELSKGDEVVTNGGMVGKIAKIDETFVDLEVADNVTVKIQRNAVANILPKGATKA
HHHHHHCCCCCEEECCCCEEHHHHHHHHHHEEEECCCEEEEEECCHHHHHCCCCCCCC
>Mature Secondary Structure
MRKLLLSLSAIVLFVSTSFAQGAEQAAGSPLSSILMLVVFFAIFWFLLIRPQQKKNKELR
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KMLSELSKGDEVVTNGGMVGKIAKIDETFVDLEVADNVTVKIQRNAVANILPKGATKA
HHHHHHCCCCCEEECCCCEEHHHHHHHHHHEEEECCCEEEEEECCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]