| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is ybeC [H]
Identifier: 134301920
GI number: 134301920
Start: 891882
End: 893426
Strand: Reverse
Name: ybeC [H]
Synonym: FTW_0927
Alternate gene names: 134301920
Gene position: 893426-891882 (Counterclockwise)
Preceding gene: 134301921
Following gene: 134301919
Centisome position: 47.06
GC content: 32.1
Gene sequence:
>1545_bases ATGAAAAAACTATCTACAATGGCAGTTGTGTTTATTTCCACTGGGGGAATGATTGGTAGTGGCTGGTTATTTTCGCCATA TTATGGTTTTCAAACAGCTGGACAAGGAGTGATAATTTCTTGGTTTATAACAGCCTTACTGACATTACTTGTAGCATTAT GTTTTGCTGAGGTAGCTTCAATGTTACCGATAGTTTCTGGAACAATGAGATTTTTGCGTATTACTCATTCGCGTACATTA GGTTTTTTATTTGTTGCTTTGGGGTGGATTAGTTATCTTGTCTATTTACCATTAGAGGCGCAATCTGTAGTGCAGTATTT AGGCTTTTGGTTTCCAAATTTAGTCGTCACAGATTCAACTAGTGTTTACTTATCATATTATGGCGTTTTTGTTGCATTTA TAATTATGCTGAGTTTGACATATCTAAATACATATCAGCTAAAAAATGTTGCAAAAATAAACTCAATTGTGAGTATTTGG AAGATATTTTTGCCTATAGCTATTGCCGTAGGAATGTTAGCATTTTATGGATCTTTTAAGAACTATCATGCTAATACGGT ACATATAAGTGTGAATTTTGAGCATATTTTATTAGCTGTGACAGGTTCAGGTTTAGCTTTTGCATTTTCAGGATTCCAAA ATGGTTTAATAGTCGCTAACTCTGCCAAGAATCCTAGATTAGCAATTCCATTATCTTTGATAGCTCCAGTTGTTGTTAGC TTAACAATGTATATATCTTTATCTTTGCTGTTTATGTTTTGTGTCCCTGAATCAGTCAATGGTTTCAATGCTGGTGTAGC ACCACTTTTAGGTTTATTAAGCTTATTTAGCTTACATATTATCTATACGATACTCTTTATCGATGCGATCGTAGCACCTC TCGGAACGGGTAACGTTTATACAGCTGTAACTGGTAGGGTTTTGCAGGCATTTGGTTTAGAGTTTTTCAAAAAATCAGTT CTGACAAGGTTAAATAAAAATCATGTACCGATCTATTGTATTTGGATTAACTTTTTTGTTGGTTTAGTTTTCTTATTTCA ATTTCCTACTTGGACAGCTTTGGTAAATTTCTTATCATCTTTGGTTTTATTTAGCTGTTTATCAGGTCCTGTAGTACTAA TTATCTTTAGAGATAAGTTTTCACATATTGAGAGAAAGTTTAAGCTTCCTTATTATCAGCTATTTGGTTATTTAGGTTTT ATATCTTGTTCATATTTTATATATTGGTCAGGAACTTTTAATTTGTTATGTCTAGTCATTCTAGTAGCATTGATATGCCT ATTGTATTGGTTTATTTTTATGCGCCAATATTTTGCTAGCGTCTTTAAGCAAACATGGTTTGTTTGTGCTTATATCATAT CTTTATGGGCTATTTCATACATCCATGAATTAGACCTAGTAAATTTTCCTTATGATAATTTATTAGTAGCTATTGTCAGT ATTATTTTTCTCAAAATATTTATTATCAGCCAAGCTGCTACCAAAGATATTGAGGAAAATATCAAGGATGTAATGTCAGA GGTTGAAAATCTTAAAAGTATTTAA
Upstream 100 bases:
>100_bases CCGGAATTTAGCTTCAAACGGCAAATAATTAAATTGTTTTGTTAGGTTTAATCTGATAATAATTATTCAATAGATATAAA ATTATAAATAAAGGATAGCG
Downstream 100 bases:
>100_bases ATATCATTTTTATTATTAAAAGCTAATTACAATCAACTTCATTTAGGATAAAATAACCTTTTAAGAAAATGTTTATTTTT ATAAAAAATGACAGATATAC
Product: amino acid permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MKKLSTMAVVFISTGGMIGSGWLFSPYYGFQTAGQGVIISWFITALLTLLVALCFAEVASMLPIVSGTMRFLRITHSRTL GFLFVALGWISYLVYLPLEAQSVVQYLGFWFPNLVVTDSTSVYLSYYGVFVAFIIMLSLTYLNTYQLKNVAKINSIVSIW KIFLPIAIAVGMLAFYGSFKNYHANTVHISVNFEHILLAVTGSGLAFAFSGFQNGLIVANSAKNPRLAIPLSLIAPVVVS LTMYISLSLLFMFCVPESVNGFNAGVAPLLGLLSLFSLHIIYTILFIDAIVAPLGTGNVYTAVTGRVLQAFGLEFFKKSV LTRLNKNHVPIYCIWINFFVGLVFLFQFPTWTALVNFLSSLVLFSCLSGPVVLIIFRDKFSHIERKFKLPYYQLFGYLGF ISCSYFIYWSGTFNLLCLVILVALICLLYWFIFMRQYFASVFKQTWFVCAYIISLWAISYIHELDLVNFPYDNLLVAIVS IIFLKIFIISQAATKDIEENIKDVMSEVENLKSI
Sequences:
>Translated_514_residues MKKLSTMAVVFISTGGMIGSGWLFSPYYGFQTAGQGVIISWFITALLTLLVALCFAEVASMLPIVSGTMRFLRITHSRTL GFLFVALGWISYLVYLPLEAQSVVQYLGFWFPNLVVTDSTSVYLSYYGVFVAFIIMLSLTYLNTYQLKNVAKINSIVSIW KIFLPIAIAVGMLAFYGSFKNYHANTVHISVNFEHILLAVTGSGLAFAFSGFQNGLIVANSAKNPRLAIPLSLIAPVVVS LTMYISLSLLFMFCVPESVNGFNAGVAPLLGLLSLFSLHIIYTILFIDAIVAPLGTGNVYTAVTGRVLQAFGLEFFKKSV LTRLNKNHVPIYCIWINFFVGLVFLFQFPTWTALVNFLSSLVLFSCLSGPVVLIIFRDKFSHIERKFKLPYYQLFGYLGF ISCSYFIYWSGTFNLLCLVILVALICLLYWFIFMRQYFASVFKQTWFVCAYIISLWAISYIHELDLVNFPYDNLLVAIVS IIFLKIFIISQAATKDIEENIKDVMSEVENLKSI >Mature_514_residues MKKLSTMAVVFISTGGMIGSGWLFSPYYGFQTAGQGVIISWFITALLTLLVALCFAEVASMLPIVSGTMRFLRITHSRTL GFLFVALGWISYLVYLPLEAQSVVQYLGFWFPNLVVTDSTSVYLSYYGVFVAFIIMLSLTYLNTYQLKNVAKINSIVSIW KIFLPIAIAVGMLAFYGSFKNYHANTVHISVNFEHILLAVTGSGLAFAFSGFQNGLIVANSAKNPRLAIPLSLIAPVVVS LTMYISLSLLFMFCVPESVNGFNAGVAPLLGLLSLFSLHIIYTILFIDAIVAPLGTGNVYTAVTGRVLQAFGLEFFKKSV LTRLNKNHVPIYCIWINFFVGLVFLFQFPTWTALVNFLSSLVLFSCLSGPVVLIIFRDKFSHIERKFKLPYYQLFGYLGF ISCSYFIYWSGTFNLLCLVILVALICLLYWFIFMRQYFASVFKQTWFVCAYIISLWAISYIHELDLVNFPYDNLLVAIVS IIFLKIFIISQAATKDIEENIKDVMSEVENLKSI
Specific function: Uptake of an yet unknown amino-acid with the concomitant import of a proton [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. AGT (TC 2.A.3.11) family [H]
Homologues:
Organism=Escherichia coli, GI87081708, Length=433, Percent_Identity=22.8637413394919, Blast_Score=62, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6319608, Length=462, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 57762; Mature: 57762
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSTMAVVFISTGGMIGSGWLFSPYYGFQTAGQGVIISWFITALLTLLVALCFAEVAS CCCHHHEEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MLPIVSGTMRFLRITHSRTLGFLFVALGWISYLVYLPLEAQSVVQYLGFWFPNLVVTDST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCC SVYLSYYGVFVAFIIMLSLTYLNTYQLKNVAKINSIVSIWKIFLPIAIAVGMLAFYGSFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NYHANTVHISVNFEHILLAVTGSGLAFAFSGFQNGLIVANSAKNPRLAIPLSLIAPVVVS CCCCEEEEEEEEHEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCEEECHHHHHHHHHH LTMYISLSLLFMFCVPESVNGFNAGVAPLLGLLSLFSLHIIYTILFIDAIVAPLGTGNVY HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TAVTGRVLQAFGLEFFKKSVLTRLNKNHVPIYCIWINFFVGLVFLFQFPTWTALVNFLSS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHH LVLFSCLSGPVVLIIFRDKFSHIERKFKLPYYQLFGYLGFISCSYFIYWSGTFNLLCLVI HHHHHHCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHH LVALICLLYWFIFMRQYFASVFKQTWFVCAYIISLWAISYIHELDLVNFPYDNLLVAIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIFLKIFIISQAATKDIEENIKDVMSEVENLKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLSTMAVVFISTGGMIGSGWLFSPYYGFQTAGQGVIISWFITALLTLLVALCFAEVAS CCCHHHEEEEEEECCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MLPIVSGTMRFLRITHSRTLGFLFVALGWISYLVYLPLEAQSVVQYLGFWFPNLVVTDST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCC SVYLSYYGVFVAFIIMLSLTYLNTYQLKNVAKINSIVSIWKIFLPIAIAVGMLAFYGSFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NYHANTVHISVNFEHILLAVTGSGLAFAFSGFQNGLIVANSAKNPRLAIPLSLIAPVVVS CCCCEEEEEEEEHEEEEEEEECCCCEEEECCCCCCEEEEECCCCCCEEECHHHHHHHHHH LTMYISLSLLFMFCVPESVNGFNAGVAPLLGLLSLFSLHIIYTILFIDAIVAPLGTGNVY HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH TAVTGRVLQAFGLEFFKKSVLTRLNKNHVPIYCIWINFFVGLVFLFQFPTWTALVNFLSS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCHHHHHHHHHHH LVLFSCLSGPVVLIIFRDKFSHIERKFKLPYYQLFGYLGFISCSYFIYWSGTFNLLCLVI HHHHHHCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEECCHHHHHHHHH LVALICLLYWFIFMRQYFASVFKQTWFVCAYIISLWAISYIHELDLVNFPYDNLLVAIVS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIFLKIFIISQAATKDIEENIKDVMSEVENLKSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377; 12730183 [H]