| Definition | Francisella tularensis subsp. tularensis WY96-3418, complete genome. |
|---|---|
| Accession | NC_009257 |
| Length | 1,898,476 |
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The map label for this gene is pheT [H]
Identifier: 134301905
GI number: 134301905
Start: 874325
End: 876697
Strand: Reverse
Name: pheT [H]
Synonym: FTW_0910
Alternate gene names: 134301905
Gene position: 876697-874325 (Counterclockwise)
Preceding gene: 134301906
Following gene: 134301903
Centisome position: 46.18
GC content: 31.35
Gene sequence:
>2373_bases ATGAAATTTTCACACAATTGGTTAAATGAATATCTAGGTGATACTCAGGATAGCCAAAATCTAGCAGATACTTTAACTTT AGCTGGTTTAGAAGTAGATGCAATTGAACCGGTAGTCGCAGAAAAAGTTAGTGGTGTAGTAGTTGGACAAATTAAAACCA TTAATAAACATCCTGATGCAGATAAATTAAATGTTTGTAGTGTCGATGCAGGTGAAGATGAGTTGCTAACGATAGTTTGT GGTGCAAGTAATATTTACGAAGGTATGAAAGCTCCTGTTGCAAAAATTGGTGCGGTACTACCAGGTAATTTTAAAATCAA AAAATCTAAACTGCGTGGTCAAGAATCTTTTGGGATGATGTGCTCGGAAGAAGAGCTTGGCTTAGCTGAAAAAGTTGATG GTTTAATGGATTTACCTATAGATGCTCCGGTTGGTACTGATATAAATAAATATTTAAATTTAGATGATAATATTATCGAA GTTGATCTAACACCAAATAGAGCAGATTGCCTAAGTGTATATGGTATTGCTCGTGAAGTATCAGCATTAACAAAAACTGA ACTTAAAAACTTAGAAATACCAGAACCTAAAGTGGTGATAGATGATACTAAAGAAGTCAATATAACTGCTACAGATGCTT GTCATGCATACTATGGCTGTATTATCAAAAATGTCAATAATAAAATTCAAACACCTTTGTGGATGGTTGAAAAACTAAGA AGAAGTGGTATTGGTAGTATTTCATTTTTTGTTGATGTAACAAACTATGTAATGCTACTTACTGGTCAACCAATGCATGC ATTTGACTTAGACAAGTTAGAGGGTAGAATTAATGTCCGTTATGCAAAAAATAATGAGGAGCTAACACTACTTGATCAAA CACAAGTTAAATTGGATTGTGATACTTTAATAATAGCAGACGATAAGAAAGCTCTTGCTATAGCTGGTGTTATGGGCGGC TTAGACTCATCAATTACTGATAGTACTACTAATATATTTTTAGAAAGTGCATTCTTTGTACCAGAGAAAATTGCTGGTAA AGCGCGTAAATATAATCTTCATACAGATTCATCACATAGATTTGAGCGTGGTGTTGATCCACAATTAGCTAAAAAAGCTA TGAAAATAGCTATTAGATTAATAAACGAAATAGCTGGTGGTGAAGTTGCACCAATTCATAGAGCTGAGGATTTAGCAAAC TTAAACAAACAAATCAAAATAAATCTTTCTATTAAGAAGCTAAATCACGTGTTAGGTACAAACTTTGATATAGAATATGT AACAGAAGTACTTAAAGCATTACATATGGATGTTGCAACAAGTTTTGATGGTAATTGTATAGAGGTAATACCTCCTTCAT ATCGTTTTGATTTGGAAATTCCTGAAGATTTAATTGAAGAAGTTGCTCGTATATACGGTTATTCAAAACTTCCAGAAACT ATGCCTAAATATGCAGCAGCTAAAACTAATATCTCTGAAACATACCAGTCTTTAGATACACTAAATATGCGTTTGATAGA TAGAGGCTATCATGAGACTATTAACTATAGTTTTATAGATCCAAAATTTGATGAGTTTTTCTTTGCTGATAGAGGTATTG CAATTCAAAATCCTATTTCACAAGATTTATCTATAATGAGACAATCTTTGATACCTGGTTTGATTAATACTTTTAAGGCA AATACATCACGTCAACAAAATCGAGTTAGAATATTTGAGAAGGGTGCTTGTTTTAAACTTCAAGATAACCAAAGAATCCA ATTTGATAGAATTGCAGGGTTAGCGTATGGAGAGCTTTTAAATATTAATTGGTCTAATTCTAAGAAAGTAGACTTTTTTG ATGTTAAAGCAGATGTTGAAGCATTATGTAATGATCTTACAAGCTTAAGTTTTGAAGTTTGTAATGATATTAATTGGCTG CATCTAGGTCAATCTGCTTATATCTTAGCTAATGGTAATAAGATTGGTGTAATCGGTGTAATTCACCCAACAGTTTTAAA AAATTTCCAAATCAAAGCAAAGGCTCCTATAGTTTTTGAATTAGATTTAGATGTTTTGATTAAAAGACAAATACCAAACT TTACTAAAATTTCTAAGTATCCCTCAGTATCGAGAGATATATCATTCTTAGTTGATAAATCTGTACTTGCTGGAGATATT ATCAAAGCTATAAAGGCTTTAAATATAAATATCTTAAAAGATGTAAGTATTTTTGATATATATGAATCACAAGATAGTGA TAGAAAGAGTATTGCTCTAAATATGCTTTTCCAAGATAACTTACAAACTTTAGATGATAAGGTTATTGTTGAGAGTATAG ATAAAGTTCTAGAAGCTCTGAAAACTAAATTTAATATTGAACAAAGAGTTTAA
Upstream 100 bases:
>100_bases GATTATCTATGCTTAGATATGGTATAGATGATCTAAGAATGTTTTTTGAAAATGATTTGAGATTTTTAAAACAGTTTTAA TTATTATTTGAGGTTTATAA
Downstream 100 bases:
>100_bases AACTTTTTTGAGATAAATTTGCTAAAATTAACCAATATTCATTTAGTTTTCTAAACATTTATTACATAACCCCTTTAACT CAAGGCTCCAACTATTAATT
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINTFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKALNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV
Sequences:
>Translated_790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINTFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKALNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV >Mature_790_residues MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDADKLNVCSVDAGEDELLTIVC GASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMMCSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIE VDLTPNRADCLSVYGIAREVSALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDCDTLIIADDKKALAIAGVMGG LDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDSSHRFERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLAN LNKQIKINLSIKKLNHVLGTNFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSKLPET MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPISQDLSIMRQSLIPGLINTFKA NTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELLNINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWL HLGQSAYILANGNKIGVIGVIHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI IKAIKALNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEALKTKFNIEQRV
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=800, Percent_Identity=45, Blast_Score=651, Evalue=0.0,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 88205; Mature: 88205
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA CCCCHHHHHHHHCCCCCCCHHHHHHEECCCEECCCCHHHHHHHCCEEEEEEEECCCCCCC DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMM CCEEEEECCCCCCCEEEEEECCHHHHHHHHCCHHHHCCCCCCCEEEEHHHHCCCHHHCCE CSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIAREV ECCHHCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR HHHHHHHHCCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDC HCCCCCEEEEEEECCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCEEEEEC DTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDSSHR CEEEEECCCCEEEEEHHHCCCCCCCCCCHHHEEEEHHCCCCHHHCCCCEEEECCCCCCCH FERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLANLNKQIKINLSIKKLNHVLGT HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEEHHHHHHHHCC NFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSKLPET CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCHHH MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPIS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCEEECCCCCHHHEEECCCEEECCCHH QDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCEEEHHHHCCEEECEEE NINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWLHLGQSAYILANGNKIGVIGV EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEEE IHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI ECHHHHCCCEEEECCCEEEEECHHHHHHHCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHH IKAIKALNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEAL HHHHHHCCCEEEECCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KTKFNIEQRV HHHCCHHCCC >Mature Secondary Structure MKFSHNWLNEYLGDTQDSQNLADTLTLAGLEVDAIEPVVAEKVSGVVVGQIKTINKHPDA CCCCHHHHHHHHCCCCCCCHHHHHHEECCCEECCCCHHHHHHHCCEEEEEEEECCCCCCC DKLNVCSVDAGEDELLTIVCGASNIYEGMKAPVAKIGAVLPGNFKIKKSKLRGQESFGMM CCEEEEECCCCCCCEEEEEECCHHHHHHHHCCHHHHCCCCCCCEEEEHHHHCCCHHHCCE CSEEELGLAEKVDGLMDLPIDAPVGTDINKYLNLDDNIIEVDLTPNRADCLSVYGIAREV ECCHHCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHH SALTKTELKNLEIPEPKVVIDDTKEVNITATDACHAYYGCIIKNVNNKIQTPLWMVEKLR HHHHHHHHCCCCCCCCCEEEECCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHH RSGIGSISFFVDVTNYVMLLTGQPMHAFDLDKLEGRINVRYAKNNEELTLLDQTQVKLDC HCCCCCEEEEEEECCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCEEEEEECCEEEEEC DTLIIADDKKALAIAGVMGGLDSSITDSTTNIFLESAFFVPEKIAGKARKYNLHTDSSHR CEEEEECCCCEEEEEHHHCCCCCCCCCCHHHEEEEHHCCCCHHHCCCCEEEECCCCCCCH FERGVDPQLAKKAMKIAIRLINEIAGGEVAPIHRAEDLANLNKQIKINLSIKKLNHVLGT HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEEHHHHHHHHCC NFDIEYVTEVLKALHMDVATSFDGNCIEVIPPSYRFDLEIPEDLIEEVARIYGYSKLPET CCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCHHH MPKYAAAKTNISETYQSLDTLNMRLIDRGYHETINYSFIDPKFDEFFFADRGIAIQNPIS HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCEEECCCCCHHHEEECCCEEECCCHH QDLSIMRQSLIPGLINTFKANTSRQQNRVRIFEKGACFKLQDNQRIQFDRIAGLAYGELL HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEECCCCEEEHHHHCCEEECEEE NINWSNSKKVDFFDVKADVEALCNDLTSLSFEVCNDINWLHLGQSAYILANGNKIGVIGV EEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEEE IHPTVLKNFQIKAKAPIVFELDLDVLIKRQIPNFTKISKYPSVSRDISFLVDKSVLAGDI ECHHHHCCCEEEECCCEEEEECHHHHHHHCCCCCHHHCCCCCCCCCHHHHHCCHHHHHHH IKAIKALNINILKDVSIFDIYESQDSDRKSIALNMLFQDNLQTLDDKVIVESIDKVLEAL HHHHHHCCCEEEECCEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH KTKFNIEQRV HHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA