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The map label for this gene is panD

Identifier: 134301568

GI number: 134301568

Start: 488958

End: 489293

Strand: Reverse

Name: panD

Synonym: FTW_0497

Alternate gene names: 134301568

Gene position: 489293-488958 (Counterclockwise)

Preceding gene: 134301569

Following gene: 134301567

Centisome position: 25.77

GC content: 33.04

Gene sequence:

>336_bases
ATGTTAATTTCAGTTTTGAAATCAAAAATCTCATACGCTACTGTAACTGGTAAAGATTTATTTTATGTCGGAAGTATCAC
TATCGATAGTGAGATAATGAAACAAGCAAATATTATTGAAAATGAGAAAGTACAAGTAGTAAACTTAAACAACGGCGAGC
GTCTTGAAACTTATGTAATCAAGGGCGAACCAAATAGTAAAACTATTGCACTAAACGGCCCAGCTGCGAGAAGGTGCGAA
ATAGGTGATCAGCTGTTTATAATTAGTTATACACAAGTTGATCCTACTAGAGAAAATATAAAACCTAAACTTGTTGATCT
AAAAACCGGAGATTAA

Upstream 100 bases:

>100_bases
AACTACAATACATTCAAAAACTTAATAACAGAATATTTTTGGCATTTTACATTGGTAAAGTACGTTTAATTGATAACTTC
CTAAAGGAGACCGGACCATC

Downstream 100 bases:

>100_bases
TAAATGATAGTATGTATAGATATTGGTAACTCACATATTTTTGGTGGAGTATTTGTAGGAGATCAAATTAAGCATAACTT
TCGCTACCCTTCTACTACTC

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLISVLKSKISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVIKGEPNSKTIALNGPAARRCE
IGDQLFIISYTQVDPTRENIKPKLVDLKTGD

Sequences:

>Translated_111_residues
MLISVLKSKISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVIKGEPNSKTIALNGPAARRCE
IGDQLFIISYTQVDPTRENIKPKLVDLKTGD
>Mature_111_residues
MLISVLKSKISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVIKGEPNSKTIALNGPAARRCE
IGDQLFIISYTQVDPTRENIKPKLVDLKTGD

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=106, Percent_Identity=35.8490566037736, Blast_Score=77, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_FRAT1 (Q14GK9)

Other databases:

- EMBL:   AM286280
- RefSeq:   YP_667468.1
- ProteinModelPortal:   Q14GK9
- SMR:   Q14GK9
- STRING:   Q14GK9
- GeneID:   4200092
- GenomeReviews:   AM286280_GR
- KEGG:   ftf:FTF1391
- eggNOG:   COG0853
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- PhylomeDB:   Q14GK9
- ProtClustDB:   PRK05449
- BioCyc:   FTUL393115:FTF1391-MONOMER
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 12329; Mature: 12329

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISVLKSKISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVI
CCHHHHHCCCCEEEECCCCEEEEEEEEECHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE
KGEPNSKTIALNGPAARRCEIGDQLFIISYTQVDPTRENIKPKLVDLKTGD
ECCCCCCEEEECCCCCCEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MLISVLKSKISYATVTGKDLFYVGSITIDSEIMKQANIIENEKVQVVNLNNGERLETYVI
CCHHHHHCCCCEEEECCCCEEEEEEEEECHHHHHHCCCCCCCCEEEEECCCCCEEEEEEE
KGEPNSKTIALNGPAARRCEIGDQLFIISYTQVDPTRENIKPKLVDLKTGD
ECCCCCCEEEECCCCCCEECCCCEEEEEEEEECCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA