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The map label for this gene is 134301345

Identifier: 134301345

GI number: 134301345

Start: 232616

End: 234031

Strand: Direct

Name: 134301345

Synonym: FTW_0226

Alternate gene names: NA

Gene position: 232616-234031 (Clockwise)

Preceding gene: 134301344

Following gene: 134301346

Centisome position: 12.25

GC content: 33.4

Gene sequence:

>1416_bases
ATGCAAAAAACGTTACTTTCTTCAGATGAAATCCTCTATCTGCCTAACGGGCAAAAGATAGTTCTCAATCAACAGCAATT
AGAAGCAGTAAATCAAATCAAAAAATTTCTCAAAAGTGATGAGCGTTATTTTTTATTATCAGGTTTTGCTGGTACCGGTA
AGACTACTGTGGTGAAAAAAATCCTTGATGAATATCCTAAAAAGGCTATAGTGTCAGCACTTACCCGTAAAGCTAATGCT
GTTATATCTCAAGCAACAGCAACACAAGGTTATACTATTCATTCGTTGTTGGGTTTACAACCAGATATAAATCTAGAAGA
CTTTAATCCAAATGATCCAGTATTTGGACAGATTAAAAAAGCGACTATTCGAAGCTATAATCTTATTATAATAGATGAGG
CTAGTATGATAAATACAGCACTCTTTGAGTTAATTGACTCTGAGATAAATAGATCATTAATAACAAAAGTGCTTTTTCTA
GGCGATCAAGCGCAAATACCACCGATTGGGGATCAGTTAAGTCCAATCTTTACGCTTGAAAACAGTTATCAGTTAACACA
ACTGATGCGTCAGGCAACAGAAAATCCATTAGCGCCATTAACTCAACAACTCCGCAACGTTAATAATCAGTTGCCTGAGT
TTCTGATCAAAAAGCAAACCCTTTTAAGTGAAGCAGCAGAGGGGATACTTTTTGTAGACTCAAATGAGGAGTTCCGTGAG
CAATTAATCGAAGTGTTTGGTTCTAGTCATGCAAAAACTGATCCAAATTATGCTAAGTTAATAGCTTGGCGAAATAAAAC
TGTAATGCAATCAAATCGCATTATCAGGGATTTGGTGTTTGGCGATGATGCAAAACTTGTTGAGAAGGGTGATGTATTAA
CAGGCTATCGAGCTATAAAGGCTAATTCAAAAGAGGAGTTTCTGATAAATAATTGTGTAGATTATAAGGTTGTCGATGTG
TCTGAAAGACAAAGGAATATAAATGGATTATTTGGCTATATGGTAAGCATTCTAGAGAAAGCAAAAATATTCAAAGGTTT
TGAGCAAAAAGATATTTTTGTAATAGATTCTCAAGATGAAACTAACTTATATGATTACGCAGAAATACATGATAGTTTAT
TGTTAATTGCAAGGTCAGATAAGTTATGGAATGCATATTATGAATTTCGTAAAAATAACCTGTTGCTGATTGATATTGAT
AGATACCGTGATGGTAGATCTAGATCTAAAAATAATTTAATCAAAAAAGATCTTGATTATGGTTTTGCAGTTACGGCACA
TAAGGCACAAGGTTCAACATATAACAAGGTATTTGTGTTGCTAAAAGATATTCAGTTAAATACAAATATTACTGAGAGAA
ATCAGATTCTGTATGTTGCGATGACTAGAGCAAGAAAATTATCAATTGTTTTATAA

Upstream 100 bases:

>100_bases
TGTATACTAAGCTTGATGATGAGGATGGTAATGAAATTGTAATCTCAAACAACCTTGTTCTATCTAAGGTAATTACTAGA
TTTACTCAAACAGATAAATA

Downstream 100 bases:

>100_bases
AAATGTTAGTGCATTACTTTACATTTATAGTTAAGCATAGTAAGATAACAACAGTTTTTTTGTAAAAGATTACTAACTTA
TTCAAAAGTAAACAATAAAT

Product: putative ATP-dependent exoDNAse

Products: NA

Alternate protein names: Deoxyribonuclease; Exonuclease V Subunit Alpha; Helicase; DNA Helicase; AAA ATPase; ATPase; ATP-Dependent Exodnase; ATP-Dependent DNA Helicase Dda; ATP-Dependent ExoDNAse; Exodeoxyribosylnuclease; ATP-Dependent Exodeoxyribonuclease; DNA Helicase Related Phage; ATP-Dependent ExoDNAse Alpha Subunit; Bacteriophage-Type DNA Helicase; ATP-Dependent ExoDNAse Subunit Alpha

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MQKTLLSSDEILYLPNGQKIVLNQQQLEAVNQIKKFLKSDERYFLLSGFAGTGKTTVVKKILDEYPKKAIVSALTRKANA
VISQATATQGYTIHSLLGLQPDINLEDFNPNDPVFGQIKKATIRSYNLIIIDEASMINTALFELIDSEINRSLITKVLFL
GDQAQIPPIGDQLSPIFTLENSYQLTQLMRQATENPLAPLTQQLRNVNNQLPEFLIKKQTLLSEAAEGILFVDSNEEFRE
QLIEVFGSSHAKTDPNYAKLIAWRNKTVMQSNRIIRDLVFGDDAKLVEKGDVLTGYRAIKANSKEEFLINNCVDYKVVDV
SERQRNINGLFGYMVSILEKAKIFKGFEQKDIFVIDSQDETNLYDYAEIHDSLLLIARSDKLWNAYYEFRKNNLLLIDID
RYRDGRSRSKNNLIKKDLDYGFAVTAHKAQGSTYNKVFVLLKDIQLNTNITERNQILYVAMTRARKLSIVL

Sequences:

>Translated_471_residues
MQKTLLSSDEILYLPNGQKIVLNQQQLEAVNQIKKFLKSDERYFLLSGFAGTGKTTVVKKILDEYPKKAIVSALTRKANA
VISQATATQGYTIHSLLGLQPDINLEDFNPNDPVFGQIKKATIRSYNLIIIDEASMINTALFELIDSEINRSLITKVLFL
GDQAQIPPIGDQLSPIFTLENSYQLTQLMRQATENPLAPLTQQLRNVNNQLPEFLIKKQTLLSEAAEGILFVDSNEEFRE
QLIEVFGSSHAKTDPNYAKLIAWRNKTVMQSNRIIRDLVFGDDAKLVEKGDVLTGYRAIKANSKEEFLINNCVDYKVVDV
SERQRNINGLFGYMVSILEKAKIFKGFEQKDIFVIDSQDETNLYDYAEIHDSLLLIARSDKLWNAYYEFRKNNLLLIDID
RYRDGRSRSKNNLIKKDLDYGFAVTAHKAQGSTYNKVFVLLKDIQLNTNITERNQILYVAMTRARKLSIVL
>Mature_471_residues
MQKTLLSSDEILYLPNGQKIVLNQQQLEAVNQIKKFLKSDERYFLLSGFAGTGKTTVVKKILDEYPKKAIVSALTRKANA
VISQATATQGYTIHSLLGLQPDINLEDFNPNDPVFGQIKKATIRSYNLIIIDEASMINTALFELIDSEINRSLITKVLFL
GDQAQIPPIGDQLSPIFTLENSYQLTQLMRQATENPLAPLTQQLRNVNNQLPEFLIKKQTLLSEAAEGILFVDSNEEFRE
QLIEVFGSSHAKTDPNYAKLIAWRNKTVMQSNRIIRDLVFGDDAKLVEKGDVLTGYRAIKANSKEEFLINNCVDYKVVDV
SERQRNINGLFGYMVSILEKAKIFKGFEQKDIFVIDSQDETNLYDYAEIHDSLLLIARSDKLWNAYYEFRKNNLLLIDID
RYRDGRSRSKNNLIKKDLDYGFAVTAHKAQGSTYNKVFVLLKDIQLNTNITERNQILYVAMTRARKLSIVL

Specific function: Unknown

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53698; Mature: 53698

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKTLLSSDEILYLPNGQKIVLNQQQLEAVNQIKKFLKSDERYFLLSGFAGTGKTTVVKK
CCCCCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ILDEYPKKAIVSALTRKANAVISQATATQGYTIHSLLGLQPDINLEDFNPNDPVFGQIKK
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ATIRSYNLIIIDEASMINTALFELIDSEINRSLITKVLFLGDQAQIPPIGDQLSPIFTLE
HEECEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
NSYQLTQLMRQATENPLAPLTQQLRNVNNQLPEFLIKKQTLLSEAAEGILFVDSNEEFRE
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHH
QLIEVFGSSHAKTDPNYAKLIAWRNKTVMQSNRIIRDLVFGDDAKLVEKGDVLTGYRAIK
HHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCEEECEEEEC
ANSKEEFLINNCVDYKVVDVSERQRNINGLFGYMVSILEKAKIFKGFEQKDIFVIDSQDE
CCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
TNLYDYAEIHDSLLLIARSDKLWNAYYEFRKNNLLLIDIDRYRDGRSRSKNNLIKKDLDY
CCCHHHHHHCCEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCC
GFAVTAHKAQGSTYNKVFVLLKDIQLNTNITERNQILYVAMTRARKLSIVL
CEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEC
>Mature Secondary Structure
MQKTLLSSDEILYLPNGQKIVLNQQQLEAVNQIKKFLKSDERYFLLSGFAGTGKTTVVKK
CCCCCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
ILDEYPKKAIVSALTRKANAVISQATATQGYTIHSLLGLQPDINLEDFNPNDPVFGQIKK
HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCCCCCCCCCCCCHHHHHH
ATIRSYNLIIIDEASMINTALFELIDSEINRSLITKVLFLGDQAQIPPIGDQLSPIFTLE
HEECEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
NSYQLTQLMRQATENPLAPLTQQLRNVNNQLPEFLIKKQTLLSEAAEGILFVDSNEEFRE
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHH
QLIEVFGSSHAKTDPNYAKLIAWRNKTVMQSNRIIRDLVFGDDAKLVEKGDVLTGYRAIK
HHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHCCCEEECEEEEC
ANSKEEFLINNCVDYKVVDVSERQRNINGLFGYMVSILEKAKIFKGFEQKDIFVIDSQDE
CCCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC
TNLYDYAEIHDSLLLIARSDKLWNAYYEFRKNNLLLIDIDRYRDGRSRSKNNLIKKDLDY
CCCHHHHHHCCEEEEEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHCCC
GFAVTAHKAQGSTYNKVFVLLKDIQLNTNITERNQILYVAMTRARKLSIVL
CEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA