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The map label for this gene is yfcH [C]

Identifier: 134301305

GI number: 134301305

Start: 181701

End: 182582

Strand: Direct

Name: yfcH [C]

Synonym: FTW_0174

Alternate gene names: 134301305

Gene position: 181701-182582 (Clockwise)

Preceding gene: 134301303

Following gene: 134301307

Centisome position: 9.57

GC content: 32.65

Gene sequence:

>882_bases
ATGAGAATATTAGTTGCAGGAGGCTCAGGTTTTGTTGGTAGAGAGCTGTCTAAATATCTAAGTACCAGACATCACTTAAC
TCTTCTTACTAGAGTAGCAAACCAAAATTTAGGTGACTATAAAGAGCTCATAACCTGGCAGCAGTTGACGGAAGATAATA
TTGTTAATTATGATATTATAATAAATTTATGTGGCTATAATATCGGCCAAAAACGTTGGACTAAAGCGGTTAAAGATAGA
ATATTATCAAGTCGTATTGAGCCAACCAATAAGCTTATACGTCTAATAAGCAATAAAAATATTTGGCTAATAAATGCTAG
TGCAATTGGCTATTATAATTTTTCTAAGCTAGCGCAAGATGAAGATAATCATGACAGAAGTTACGATAAGTTTACTTTTG
GACAAAAAGTTGTTGATCAATGGGAAAAATGCTTAGTTGACTCTCATTTACAGCGATATACTATTCTACGCTTTGGGGTT
GTTATTGGTAATGGTGGTGTGCTTGAAAAAATGGCGCTGCCAGCTAAGTTTGGCTTTTTAACTATGTTTGGAGATGGTCA
TAACTATATGAGCTGGGTAAGTGCTTATGATTTATCTCGAGCTATTGAATTCATTATTGATAAGAAACTAGATAGTAAAG
AAATATTTAACTTAACGGCACCAGATGCTTGTCAGCATAAACTTTTAGTCGAACTTCTGAGAAAATATCTAGCTAAAAAA
CGTATTATCAAAATACCTACATTTATGATAAAGCTTATGTTTGGGCAAATGGGAGAAGAGTTACTTCTGTCAAGTCAAAA
TATTAAACCAGCAAAATTACAAAGATTAGGATTTGTTTTTGAAGATTCAAATATACAGCAAGCTTTAGAACGATATATTT
AA

Upstream 100 bases:

>100_bases
TTAGCGTAGTAACATTAATAAAATGTAATGTTATTTTTATTATCTTTATCAATATAATATATTTTAAGAGAAGGGTTAAT
AAGAGTTTAGGAGAAGCGTC

Downstream 100 bases:

>100_bases
TTTTCTTCGTATTTATGATCTATAGGAATTTTGACAGTAATGGTTAAGCCTTTTTGGTTGATATTGTTTTGAGCAAAAAT
TTTACCATTATGAAGCCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRILVAGGSGFVGRELSKYLSTRHHLTLLTRVANQNLGDYKELITWQQLTEDNIVNYDIIINLCGYNIGQKRWTKAVKDR
ILSSRIEPTNKLIRLISNKNIWLINASAIGYYNFSKLAQDEDNHDRSYDKFTFGQKVVDQWEKCLVDSHLQRYTILRFGV
VIGNGGVLEKMALPAKFGFLTMFGDGHNYMSWVSAYDLSRAIEFIIDKKLDSKEIFNLTAPDACQHKLLVELLRKYLAKK
RIIKIPTFMIKLMFGQMGEELLLSSQNIKPAKLQRLGFVFEDSNIQQALERYI

Sequences:

>Translated_293_residues
MRILVAGGSGFVGRELSKYLSTRHHLTLLTRVANQNLGDYKELITWQQLTEDNIVNYDIIINLCGYNIGQKRWTKAVKDR
ILSSRIEPTNKLIRLISNKNIWLINASAIGYYNFSKLAQDEDNHDRSYDKFTFGQKVVDQWEKCLVDSHLQRYTILRFGV
VIGNGGVLEKMALPAKFGFLTMFGDGHNYMSWVSAYDLSRAIEFIIDKKLDSKEIFNLTAPDACQHKLLVELLRKYLAKK
RIIKIPTFMIKLMFGQMGEELLLSSQNIKPAKLQRLGFVFEDSNIQQALERYI
>Mature_293_residues
MRILVAGGSGFVGRELSKYLSTRHHLTLLTRVANQNLGDYKELITWQQLTEDNIVNYDIIINLCGYNIGQKRWTKAVKDR
ILSSRIEPTNKLIRLISNKNIWLINASAIGYYNFSKLAQDEDNHDRSYDKFTFGQKVVDQWEKCLVDSHLQRYTILRFGV
VIGNGGVLEKMALPAKFGFLTMFGDGHNYMSWVSAYDLSRAIEFIIDKKLDSKEIFNLTAPDACQHKLLVELLRKYLAKK
RIIKIPTFMIKLMFGQMGEELLLSSQNIKPAKLQRLGFVFEDSNIQQALERYI

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=303, Percent_Identity=26.7326732673267, Blast_Score=131, Evalue=8e-31,
Organism=Escherichia coli, GI1788642, Length=299, Percent_Identity=31.1036789297659, Blast_Score=142, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28573846, Length=299, Percent_Identity=27.4247491638796, Blast_Score=127, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33823; Mature: 33823

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVAGGSGFVGRELSKYLSTRHHLTLLTRVANQNLGDYKELITWQQLTEDNIVNYDII
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEE
INLCGYNIGQKRWTKAVKDRILSSRIEPTNKLIRLISNKNIWLINASAIGYYNFSKLAQD
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCEECCCCHHHHHCC
EDNHDRSYDKFTFGQKVVDQWEKCLVDSHLQRYTILRFGVVIGNGGVLEKMALPAKFGFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCEE
TMFGDGHNYMSWVSAYDLSRAIEFIIDKKLDSKEIFNLTAPDACQHKLLVELLRKYLAKK
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHH
RIIKIPTFMIKLMFGQMGEELLLSSQNIKPAKLQRLGFVFEDSNIQQALERYI
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCEEECCCHHHHHHHCC
>Mature Secondary Structure
MRILVAGGSGFVGRELSKYLSTRHHLTLLTRVANQNLGDYKELITWQQLTEDNIVNYDII
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEE
INLCGYNIGQKRWTKAVKDRILSSRIEPTNKLIRLISNKNIWLINASAIGYYNFSKLAQD
EEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEECCEECCCCHHHHHCC
EDNHDRSYDKFTFGQKVVDQWEKCLVDSHLQRYTILRFGVVIGNGGVLEKMALPAKFGFL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHCCCCCCEE
TMFGDGHNYMSWVSAYDLSRAIEFIIDKKLDSKEIFNLTAPDACQHKLLVELLRKYLAKK
EEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHH
RIIKIPTFMIKLMFGQMGEELLLSSQNIKPAKLQRLGFVFEDSNIQQALERYI
HHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCEEECCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA