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The map label for this gene is sdhD [C]

Identifier: 134301287

GI number: 134301287

Start: 159180

End: 159533

Strand: Direct

Name: sdhD [C]

Synonym: FTW_0149

Alternate gene names: 134301287

Gene position: 159180-159533 (Clockwise)

Preceding gene: 134301286

Following gene: 134301288

Centisome position: 8.38

GC content: 34.46

Gene sequence:

>354_bases
ATGGCTGTAATTTCATTAACTTCTTCTGGAATTAAAGACTTTTTCGTACAAAGAGTTACGGCTGTAATTATTGCTGTATA
TTTTGGTTATCTTATCCTAGAAGCTTTGTATTTGTCGCATATAGGAGCTCTTAACTATGATAGTTGGAGAGGTTTGTTTA
CCGATGGGATGTTTTTTAGAGTTGCTACGTTAATGGCGTACTTGGCGATGTTTTTTCATGCATGGGTAGGTATCTGGATT
ATATGTGGCGATTATATTAAATTTGCTTGGGCTTCTGCGCTTGTGATGCTGAGCTTTGTTTTGGTGTATATATTCTGCTT
TTTTTGGTTATTTGCAGTTTTATTTTTCTATTAA

Upstream 100 bases:

>100_bases
TGGATATGGGCTTTGGTGAGAGTATGAAAGTGGCAAAAATCACTTCACTACTAGTTATCGTTTTGGGTGTTTTATCAGCT
ATTTTATGGGGGTGTTACTT

Downstream 100 bases:

>100_bases
GAGGTTGTTTTTATGAGTATAGCTACGCAAGAATTTGATGCTATTGTTATCGGTGCTGGTGGTGCGGGTTTAAGAGCTTC
TTTCCAGCTGTCACAGTCGG

Product: succinate dehydrogenase, hydrophobic membrane anchor protein

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit D

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYLAMFFHAWVGIWI
ICGDYIKFAWASALVMLSFVLVYIFCFFWLFAVLFFY

Sequences:

>Translated_117_residues
MAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYLAMFFHAWVGIWI
ICGDYIKFAWASALVMLSFVLVYIFCFFWLFAVLFFY
>Mature_116_residues
AVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFRVATLMAYLAMFFHAWVGIWII
CGDYIKFAWASALVMLSFVLVYIFCFFWLFAVLFFY

Specific function: This Is The Hydrophobic Component Of The Succinate Dehydrogenase Complex. It Is Suggested That It Is Required To Anchor The Catalytic Components To The Cytoplasmic Membrane. [C]

COG id: COG2142

COG function: function code C; Succinate dehydrogenase, hydrophobic anchor subunit

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 13559; Mature: 13428

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFR
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VATLMAYLAMFFHAWVGIWIICGDYIKFAWASALVMLSFVLVYIFCFFWLFAVLFFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AVISLTSSGIKDFFVQRVTAVIIAVYFGYLILEALYLSHIGALNYDSWRGLFTDGMFFR
CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VATLMAYLAMFFHAWVGIWIICGDYIKFAWASALVMLSFVLVYIFCFFWLFAVLFFY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA