| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
Click here to switch to the map view.
The map label for this gene is 134300506
Identifier: 134300506
GI number: 134300506
Start: 2890990
End: 2892987
Strand: Reverse
Name: 134300506
Synonym: Dred_2671
Alternate gene names: NA
Gene position: 2892987-2890990 (Counterclockwise)
Preceding gene: 134300507
Following gene: 134300505
Centisome position: 80.18
GC content: 47.85
Gene sequence:
>1998_bases ATGCAAAATATTTCTGCCAAGAGAGTTATGCTGCTGGGTATTGATGGTGCAGACCCGGCCTTTATGAAGCCCTTGATGGA TGCTGGAAGGCTGCCAAATATAAAGAGAATGGCCGATATGGGAGCTTGCCATGAGAATTGTGAAATGATGGGTGCTGTAC CCACCATTACCCCTCCCTGCTGGTCCACTCTGGGAAACGGTGCTTATCCTGGTACCCATGGTATCACCTGTTTTTGGACA CATTTTAAGGGCAAGGCCTTAGATGAAATTGAGTTTGGTATGAACTCCCGTATCGTGAAGGCTGAAACCATCTGGAACTT GTATGCCAAAAACGGTCACAAAGTGTTGGTATACCATTATCCTACTTCCTGGCCCCCGTCCGAGGATCCCGAAGTGTTGA AAAACATTATCTTAGTAGACGGAACCTGCCCGGAAACCCCCTTTTTCACCGCCCAGGTGGACTACGAAAAAGTAGTAAAA GCCAGTGAAAATTCCGAGTTCAAGGCCCCTGTCTATAAAGCCTGTGAGGTTGATGAAACCGGCGCCGGCTGCTTTATGAG TGAAGAGATTTCCGATGAAAAGGGTAATACCTCCCTCAAAATGACCAGTATTGTATTAAGCGAAGCGGACGGCATTGACG GTGAAAACGGTGCAGCGGGCAAACACGATGTTGTTCAAACACCCATTAAGCCTGCCAAAGGTTGGGTTGCTGCCCCGGCA GGTGCCAAAGAATTCGGTATTATTGTTAATAAAGGTGAAACCAGACGCTACGGATTAATTCTGGCCAACGAAAAGGGTGA ATATGATCGGGTAGCTATCTATAAGAGTAAGAAGGATGCTGAGCCAATGGTGGTGGTGAATACCACCGATTGGAGCGAAT GTGTCTACGATGTATACAAGCAAGATGGTAAGGATGTTCGGATCGGTCGTTATTACCGTATTATGCACCTTGCCTCAGAT GGCTCCGAGTTACGTTTGTACATTTCCTTTGCGGCGAACCTGGATGACTTCCACTTGATTCACCCTGAAGAATTAGGACG CGAACTCTTTGACAAATTCGGCGTTATTCCCTTTGTTTCTCACTCCACCAGTCACGATAAAGAGCTGGCACAAATTGTAT TGGAATCCTGGCAAAGACAGGCACGCTGGCATGCTGAGACTCTGAAATACCTGATTGAAAAGCACAACCCCACCCTGGTT TATACCCATCTGCACTCGGTGGATCTGATGGGGCACCTGTTTACCGCTAACCTGCGTCCCAGCCACCAGGATCATGAGTT TTTCCGTGAACTGATGGCCAAGAGCTACGAACTGTCCGATGATTGGGTAGGTGAGTTCTTGCCTTACATGGAGGACCAAG AAACGACCCTCTTCTTGGTTTCCGACCACGGTCTAACAGCAGGGGAAGAAAATCCACCGTTGTTGGCTGATCCCTGGGGT ATTAATGCCGGTGTTATGTCCGAACTGGGCTACATTGGCTTAAAAAATGACGAAAAAGGTAAGCCCGCCATTGATTGGAG TAAAACAAAAGCGGTGGCCCAGCGTTCTGGGTATATATACATTAACCTGAAGGGTCGAGATCCCGAGGGTATTGTGGACC CTTCAGAATACGATGAACTGGTTACCAAAATTATTGATGATCTCTATGCCTACAGAGATAAAAAGACCGGCAAGCGTGTG GTAGCCTTTGCACTACGGTCAGAGGATCAGAAGATTATTGGTCTGGGCGGCGAAAACTGTGGTGACATTTACTACATTCT GGAGCCGGATTTTAACCGGATTCACGGGGACTCATTACCGACCTATGGCAAACACGGTACCTCGGTAATGTCCATCTTTA TTGCCGCAGGTGCCGGTGTAAAACAAAACTATCGTACCGAGCGGGTAATTCGCCAGGTGGACGTTGTTCCTACCATTGCA GATCTGCTGGGAGGTCCCGTGCCGGCCCAATGCGAAGGCGGGATTCTTTATCAATTACTTAATAAATATGGTCAGTAG
Upstream 100 bases:
>100_bases TCTTATTAACCTGTATTTGCTATCCCTATTGGAAATTAGTTGGCCTCTTCTAATATATGGTTTATTTTGTGGTAAAAAAT GACATTAAGGAGGATGACCT
Downstream 100 bases:
>100_bases CTGTTAACAACGAATATACGGTGAAAATGAAGTTTTTATTTTCACCGTATTTGTTCTTAAACTATAAATAATGAGAGGGA TAGTATATGAGCAATACAAC
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: Phosphodiesterase/Nucleotide Pyrophosphatase
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA DLLGGPVPAQCEGGILYQLLNKYGQ
Sequences:
>Translated_665_residues MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA DLLGGPVPAQCEGGILYQLLNKYGQ >Mature_665_residues MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPCWSTLGNGAYPGTHGITCFWT HFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHYPTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVK ASENSEFKAPVYKACEVDETGAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYKQDGKDVRIGRYYRIMHLASD GSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVSHSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLV YTHLHSVDLMGHLFTANLRPSHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDELVTKIIDDLYAYRDKKTGKRV VAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLPTYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIA DLLGGPVPAQCEGGILYQLLNKYGQ
Specific function: Unknown
COG id: COG3379
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74186; Mature: 74186
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPC CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCHHHCCCCCCCCCHH WSTLGNGAYPGTHGITCFWTHFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHY HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEHHHHHHHEECCCCEEEEEEC PTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVKASENSEFKAPVYKACEVDET CCCCCCCCCHHHHHCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHCCCCCC GAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA CCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEECCC GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYK CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHH QDGKDVRIGRYYRIMHLASDGSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVS CCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCEEEC HSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLVYTHLHSVDLMGHLFTANLRP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEECCCCC SHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCC INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDEL CCHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH VTKIIDDLYAYRDKKTGKRVVAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLP HHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC TYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIADLLGGPVPAQCEGGILYQLL CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH NKYGQ HHHCC >Mature Secondary Structure MQNISAKRVMLLGIDGADPAFMKPLMDAGRLPNIKRMADMGACHENCEMMGAVPTITPPC CCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCHHHCCCCCCCCCHH WSTLGNGAYPGTHGITCFWTHFKGKALDEIEFGMNSRIVKAETIWNLYAKNGHKVLVYHY HHHCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEHHHHHHHEECCCCEEEEEEC PTSWPPSEDPEVLKNIILVDGTCPETPFFTAQVDYEKVVKASENSEFKAPVYKACEVDET CCCCCCCCCHHHHHCEEEECCCCCCCCEEEEECCHHHHHHCCCCCCCCCCHHHHCCCCCC GAGCFMSEEISDEKGNTSLKMTSIVLSEADGIDGENGAAGKHDVVQTPIKPAKGWVAAPA CCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCEEECCC GAKEFGIIVNKGETRRYGLILANEKGEYDRVAIYKSKKDAEPMVVVNTTDWSECVYDVYK CCCCEEEEEECCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHH QDGKDVRIGRYYRIMHLASDGSELRLYISFAANLDDFHLIHPEELGRELFDKFGVIPFVS CCCCEEEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHHHHCCCCEEEC HSTSHDKELAQIVLESWQRQARWHAETLKYLIEKHNPTLVYTHLHSVDLMGHLFTANLRP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHEECCCCC SHQDHEFFRELMAKSYELSDDWVGEFLPYMEDQETTLFLVSDHGLTAGEENPPLLADPWG CCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCC INAGVMSELGYIGLKNDEKGKPAIDWSKTKAVAQRSGYIYINLKGRDPEGIVDPSEYDEL CCHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH VTKIIDDLYAYRDKKTGKRVVAFALRSEDQKIIGLGGENCGDIYYILEPDFNRIHGDSLP HHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCC TYGKHGTSVMSIFIAAGAGVKQNYRTERVIRQVDVVPTIADLLGGPVPAQCEGGILYQLL CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH NKYGQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA