Click here to switch to the map view.

The map label for this gene is tsr [C]

Identifier: 134300472

GI number: 134300472

Start: 2856049

End: 2857152

Strand: Reverse

Name: tsr [C]

Synonym: Dred_2636

Alternate gene names: 134300472

Gene position: 2857152-2856049 (Counterclockwise)

Preceding gene: 134300474

Following gene: 134300470

Centisome position: 79.19

GC content: 38.59

Gene sequence:

>1104_bases
ATGAAAGATATCAGCGGGCAGCCTACTGTAATGCTGCTGAACACCAGCAGTTCAAAGGCCAGCCTAGCCGTAAATAATAA
ATTTGTGTACTATACCACCGGTGTGTCGGTATTTATTATTGTGGGGATTGCTTTGCTCTATGTTATGCAAAAAAAGAAAC
TAATCAATCCTATCCTGCTGATGGCTAACAGTATGAAGCAAATAGCCACTGGTGACCTTAATACAGTTGTTCATTATAAG
TCGGATGATGAGATAGGGATGTTAGCAGATAATATCAATGAAATGACCAGTAAACTAGCTCGTTTAACAGATGATATTCA
AGACACAACACGAACACTAGCTAACTACAGTAACCATATAGCGGACGCTAACGAAGAAATTAGTTCCACAATTCAGCAAT
TAGCTGGCACCAGTTCGGAAATTGCAGCAGCAACAGAAAATGGATATAACATTACATTACAGTCTGTTAATGAAGCCCAA
GTTACTAAAAATGTAGCTTTGGAGGGTGTACAAATAGTAAATAAAGTAATTGAGAAGGACAGACAGATTTCTGAATTAGC
CTCGGTAATAAACGAAGATGTAAACAAACTTACGAACCTATCAGAACAGGTAGGAAAAATTATAGAAGTGATTACAGGGA
TTGCCGACCAAACAAATCTGTTAGCGCTAAATGCTGCCATCGAAGCAGCTAGGGCCGGCGAACAGGGTAAAGGTTTTTCT
GTTGTGGCAGAAGAAGTACGAAAGTTGGCAGATCATAGTGGGACATCCGCTAAGGAAATAGCCCGAATGGTATATAATAT
TAAGGAAGGCATTGAAAGTACGAGCAAGAATCTTGCCATAACTAGTCTAGAATGCGAACAGAGCCTACTGTTAACCAGAG
AAGCCGGGGAAGTGCTTGATAATATTAAAACAGAAACAAATAAAAATATCGAAATGGTACAAACAGTAAACGATAGGTTT
AAACTAACATTGGAGGGCGTAGAATCTCTTGCAGCCAGTAATGAACAAGTTTCTGCTTCTATTCAACAAATGAATACGAC
TGCCCAGTCATTATCTGAAATTGCTCAGCAACTTGAATTAGTAGTAAAACAGTTTAAAGTATAA

Upstream 100 bases:

>100_bases
ATTAGACCTTGATGTTATTGGGTTTTTAAACTTTACTTTCCGTATCTAAGTTCAATCCTATGCCCACAATAATGAAAAAT
ATTATGATTCCTTTTCTGCA

Downstream 100 bases:

>100_bases
AAAACCTTGCTTACAAAACTAGGCACCCTGTAAGATCTGAGAGGGCCTTTTCGGGTAAGTACAATTGTACCGCTTTATTA
CTCTCGCTATAGCAGAATTA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKDISGQPTVMLLNTSSSKASLAVNNKFVYYTTGVSVFIIVGIALLYVMQKKKLINPILLMANSMKQIATGDLNTVVHYK
SDDEIGMLADNINEMTSKLARLTDDIQDTTRTLANYSNHIADANEEISSTIQQLAGTSSEIAAATENGYNITLQSVNEAQ
VTKNVALEGVQIVNKVIEKDRQISELASVINEDVNKLTNLSEQVGKIIEVITGIADQTNLLALNAAIEAARAGEQGKGFS
VVAEEVRKLADHSGTSAKEIARMVYNIKEGIESTSKNLAITSLECEQSLLLTREAGEVLDNIKTETNKNIEMVQTVNDRF
KLTLEGVESLAASNEQVSASIQQMNTTAQSLSEIAQQLELVVKQFKV

Sequences:

>Translated_367_residues
MKDISGQPTVMLLNTSSSKASLAVNNKFVYYTTGVSVFIIVGIALLYVMQKKKLINPILLMANSMKQIATGDLNTVVHYK
SDDEIGMLADNINEMTSKLARLTDDIQDTTRTLANYSNHIADANEEISSTIQQLAGTSSEIAAATENGYNITLQSVNEAQ
VTKNVALEGVQIVNKVIEKDRQISELASVINEDVNKLTNLSEQVGKIIEVITGIADQTNLLALNAAIEAARAGEQGKGFS
VVAEEVRKLADHSGTSAKEIARMVYNIKEGIESTSKNLAITSLECEQSLLLTREAGEVLDNIKTETNKNIEMVQTVNDRF
KLTLEGVESLAASNEQVSASIQQMNTTAQSLSEIAQQLELVVKQFKV
>Mature_367_residues
MKDISGQPTVMLLNTSSSKASLAVNNKFVYYTTGVSVFIIVGIALLYVMQKKKLINPILLMANSMKQIATGDLNTVVHYK
SDDEIGMLADNINEMTSKLARLTDDIQDTTRTLANYSNHIADANEEISSTIQQLAGTSSEIAAATENGYNITLQSVNEAQ
VTKNVALEGVQIVNKVIEKDRQISELASVINEDVNKLTNLSEQVGKIIEVITGIADQTNLLALNAAIEAARAGEQGKGFS
VVAEEVRKLADHSGTSAKEIARMVYNIKEGIESTSKNLAITSLECEQSLLLTREAGEVLDNIKTETNKNIEMVQTVNDRF
KLTLEGVESLAASNEQVSASIQQMNTTAQSLSEIAQQLELVVKQFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=243, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=7e-31,
Organism=Escherichia coli, GI1788195, Length=260, Percent_Identity=30.7692307692308, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI1788194, Length=248, Percent_Identity=31.0483870967742, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789453, Length=261, Percent_Identity=27.5862068965517, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787690, Length=237, Percent_Identity=30.379746835443, Blast_Score=102, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 39844; Mature: 39844

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDISGQPTVMLLNTSSSKASLAVNNKFVYYTTGVSVFIIVGIALLYVMQKKKLINPILL
CCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
MANSMKQIATGDLNTVVHYKSDDEIGMLADNINEMTSKLARLTDDIQDTTRTLANYSNHI
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADANEEISSTIQQLAGTSSEIAAATENGYNITLQSVNEAQVTKNVALEGVQIVNKVIEKD
CCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
RQISELASVINEDVNKLTNLSEQVGKIIEVITGIADQTNLLALNAAIEAARAGEQGKGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCHH
VVAEEVRKLADHSGTSAKEIARMVYNIKEGIESTSKNLAITSLECEQSLLLTREAGEVLD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHH
NIKTETNKNIEMVQTVNDRFKLTLEGVESLAASNEQVSASIQQMNTTAQSLSEIAQQLEL
HHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKQFKV
HHHHHCC
>Mature Secondary Structure
MKDISGQPTVMLLNTSSSKASLAVNNKFVYYTTGVSVFIIVGIALLYVMQKKKLINPILL
CCCCCCCCEEEEEECCCCCCEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
MANSMKQIATGDLNTVVHYKSDDEIGMLADNINEMTSKLARLTDDIQDTTRTLANYSNHI
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADANEEISSTIQQLAGTSSEIAAATENGYNITLQSVNEAQVTKNVALEGVQIVNKVIEKD
CCCHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
RQISELASVINEDVNKLTNLSEQVGKIIEVITGIADQTNLLALNAAIEAARAGEQGKGFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCCCCCHH
VVAEEVRKLADHSGTSAKEIARMVYNIKEGIESTSKNLAITSLECEQSLLLTREAGEVLD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHH
NIKTETNKNIEMVQTVNDRFKLTLEGVESLAASNEQVSASIQQMNTTAQSLSEIAQQLEL
HHHHCCCCCHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VVKQFKV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA