| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300313
Identifier: 134300313
GI number: 134300313
Start: 2697117
End: 2697566
Strand: Reverse
Name: 134300313
Synonym: Dred_2474
Alternate gene names: NA
Gene position: 2697566-2697117 (Counterclockwise)
Preceding gene: 134300314
Following gene: 134300312
Centisome position: 74.76
GC content: 46.22
Gene sequence:
>450_bases GTGACCAGTGAACTGGAGAAGATAGACCTTCTGCGAGCCCGACTGGGCGTTAGTTACAAGGAAGCAAAGGAAGCCCTTAA TCTAGCCGATGGCGATGTTGTGCAGGCTTTAATAAAATTGGAAGAAAAGAATCGGCATTGGAATGAGAAGCTCCATGGCA AGGGAAATGAATTTATGGGCCAATTTAAAACACTCCTGGAAAAGGGCCAAAGGACGAAAGTAAAAATAAAGAAGGATGAT GATACCGTGGTGGAATTCCCAGCCACAGTGGGTGCCCTAGGGGTCTTGGGAGCAATGGCCAGCACGCCTATTTTAGTGGT AGGTGCCCTGGGCACCATCGCCGGATTAGTCAATAATTACCGGCTGGAGTTTCAAGAGGATAGTGATAGATGGGAACCTG AGGTTGAGGTTCCAGAGAATAATTTTGACAAAAATAATCCTCAGCATTAA
Upstream 100 bases:
>100_bases AAAAATTAAAAACCACAGAATTTATGGATCGCTTGTATAAAAGTAACTTGGGTAGGGGTACAAATATATAATACAAAGGA CTATGGGGAGGTTTGATATA
Downstream 100 bases:
>100_bases AACTATTGACAAGAACCTGGCAGTTTGATAGATTTTTGGTTATAATTAAAAACTTTGCGATGAGGGAAAGAGTATACGAG AAACTGGTTCTTAGCGAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Ubiquitin-Associated Domain-Containing Protein; Ubiquitin-Associated-Domain-Containing Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTSELEKIDLLRARLGVSYKEAKEALNLADGDVVQALIKLEEKNRHWNEKLHGKGNEFMGQFKTLLEKGQRTKVKIKKDD DTVVEFPATVGALGVLGAMASTPILVVGALGTIAGLVNNYRLEFQEDSDRWEPEVEVPENNFDKNNPQH
Sequences:
>Translated_149_residues MTSELEKIDLLRARLGVSYKEAKEALNLADGDVVQALIKLEEKNRHWNEKLHGKGNEFMGQFKTLLEKGQRTKVKIKKDD DTVVEFPATVGALGVLGAMASTPILVVGALGTIAGLVNNYRLEFQEDSDRWEPEVEVPENNFDKNNPQH >Mature_148_residues TSELEKIDLLRARLGVSYKEAKEALNLADGDVVQALIKLEEKNRHWNEKLHGKGNEFMGQFKTLLEKGQRTKVKIKKDDD TVVEFPATVGALGVLGAMASTPILVVGALGTIAGLVNNYRLEFQEDSDRWEPEVEVPENNFDKNNPQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16659; Mature: 16528
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSELEKIDLLRARLGVSYKEAKEALNLADGDVVQALIKLEEKNRHWNEKLHGKGNEFMG CCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH QFKTLLEKGQRTKVKIKKDDDTVVEFPATVGALGVLGAMASTPILVVGALGTIAGLVNNY HHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RLEFQEDSDRWEPEVEVPENNFDKNNPQH EEEECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSELEKIDLLRARLGVSYKEAKEALNLADGDVVQALIKLEEKNRHWNEKLHGKGNEFMG CCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHH QFKTLLEKGQRTKVKIKKDDDTVVEFPATVGALGVLGAMASTPILVVGALGTIAGLVNNY HHHHHHHCCCCCEEEEECCCCCEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC RLEFQEDSDRWEPEVEVPENNFDKNNPQH EEEECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA