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The map label for this gene is dppC [H]

Identifier: 134300291

GI number: 134300291

Start: 2666962

End: 2667852

Strand: Reverse

Name: dppC [H]

Synonym: Dred_2452

Alternate gene names: 134300291

Gene position: 2667852-2666962 (Counterclockwise)

Preceding gene: 134300292

Following gene: 134300290

Centisome position: 73.94

GC content: 51.07

Gene sequence:

>891_bases
ATGCCGCAAGCTCAAACATCTGCGCCGGTTCCTCAACCGGCCGAGCAGACTTACTCACCGTTGGCAGACTTCTGGCACCG
CCTGCGGAAAAACAAGCTGGCGATGGTCAGTCTAATCTTTTTATTAACCTTAACCTTTGTTGCTATTTTTGCACCCTTTG
TTGCACCCTACGACCCTTATCTCAGTGAAATGCCCAAGGCACTGCACGGCCCCAGTGCGCAGCATTGGCTGGGCAACGAT
GAATTGGGCCGAGACATCCTAAGCCGGATTATTTACGGGGCAGGCGTATCCCTGCGGGTGGGTTTGATTGCTGTGTGCAT
TGCCCTATCGGTAGGCATGGTGGTTGGTTCTGCGGCCGGTTATTACGGTGGTCGTTTGGATAACATTATTATGCGTTTTA
TGGATATTATGCTGGCCTTCCCCTCTATTTTGCTGGCCATAGCCCTAATGGCTGTTTTGGGTCGGGGGGTAGAAAATGCC
ATTATTGCCATTGGTATTGTGTCTATTCCTGAATATGCTCGAATTATTCGGGGGTCCGTATTGTCCGTTAAAGAAAATGA
GTATGTACAGGCTGCCCGAGCCATTGGGAACAATGACTTTCAAATTATTTTCAAACATATCATGCCTAACGTTATGGCCC
CAGTAATTGTGCGTGCCACCCTTGGTATCTCCACCGCTATCCTGGAGACATCTGCTCTGGGGTTCCTAGGTCTGGGGGTT
GCACCGCCCTTCGCAGAATGGGGAACCATGTTGGGAAGTGGTCGAGGATATATGTATAATGCGCCGCATCTGGTGTTTTT
CCCGGGTATTGCAATTACCCTGACGGTTATGGCCTTTAACCTGCTGGGGGATGGCCTGCGGGATGCACTGGATCCACGGT
TGCGCCGCTAG

Upstream 100 bases:

>100_bases
ATTCCTAGAATAGCCATGGGCCGTGAGCCATGAGCTAAAACCTAAAACCCAAGGCCCAAGGCCTACTCCAAAGAAATACC
CATAAGAAAGGAATTTGCGT

Downstream 100 bases:

>100_bases
GAGGTGGGTCGAATGACACAGACATTATTAGAAGTAAAGGACCTCAAAACCCACTTTTTCCTGGAGGATGGAGTGGTACC
GGCCGTTGACGGTGTAAGTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPQAQTSAPVPQPAEQTYSPLADFWHRLRKNKLAMVSLIFLLTLTFVAIFAPFVAPYDPYLSEMPKALHGPSAQHWLGND
ELGRDILSRIIYGAGVSLRVGLIAVCIALSVGMVVGSAAGYYGGRLDNIIMRFMDIMLAFPSILLAIALMAVLGRGVENA
IIAIGIVSIPEYARIIRGSVLSVKENEYVQAARAIGNNDFQIIFKHIMPNVMAPVIVRATLGISTAILETSALGFLGLGV
APPFAEWGTMLGSGRGYMYNAPHLVFFPGIAITLTVMAFNLLGDGLRDALDPRLRR

Sequences:

>Translated_296_residues
MPQAQTSAPVPQPAEQTYSPLADFWHRLRKNKLAMVSLIFLLTLTFVAIFAPFVAPYDPYLSEMPKALHGPSAQHWLGND
ELGRDILSRIIYGAGVSLRVGLIAVCIALSVGMVVGSAAGYYGGRLDNIIMRFMDIMLAFPSILLAIALMAVLGRGVENA
IIAIGIVSIPEYARIIRGSVLSVKENEYVQAARAIGNNDFQIIFKHIMPNVMAPVIVRATLGISTAILETSALGFLGLGV
APPFAEWGTMLGSGRGYMYNAPHLVFFPGIAITLTVMAFNLLGDGLRDALDPRLRR
>Mature_295_residues
PQAQTSAPVPQPAEQTYSPLADFWHRLRKNKLAMVSLIFLLTLTFVAIFAPFVAPYDPYLSEMPKALHGPSAQHWLGNDE
LGRDILSRIIYGAGVSLRVGLIAVCIALSVGMVVGSAAGYYGGRLDNIIMRFMDIMLAFPSILLAIALMAVLGRGVENAI
IAIGIVSIPEYARIIRGSVLSVKENEYVQAARAIGNNDFQIIFKHIMPNVMAPVIVRATLGISTAILETSALGFLGLGVA
PPFAEWGTMLGSGRGYMYNAPHLVFFPGIAITLTVMAFNLLGDGLRDALDPRLRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=288, Percent_Identity=47.5694444444444, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1787760, Length=293, Percent_Identity=44.0273037542662, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1789964, Length=296, Percent_Identity=48.3108108108108, Blast_Score=232, Evalue=2e-62,
Organism=Escherichia coli, GI1789889, Length=239, Percent_Identity=42.6778242677824, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1787498, Length=301, Percent_Identity=36.2126245847176, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI1787549, Length=290, Percent_Identity=35.5172413793103, Blast_Score=157, Evalue=7e-40,
Organism=Escherichia coli, GI1788505, Length=224, Percent_Identity=30.8035714285714, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31998; Mature: 31867

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQAQTSAPVPQPAEQTYSPLADFWHRLRKNKLAMVSLIFLLTLTFVAIFAPFVAPYDPY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LSEMPKALHGPSAQHWLGNDELGRDILSRIIYGAGVSLRVGLIAVCIALSVGMVVGSAAG
HHHCCHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
YYGGRLDNIIMRFMDIMLAFPSILLAIALMAVLGRGVENAIIAIGIVSIPEYARIIRGSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
LSVKENEYVQAARAIGNNDFQIIFKHIMPNVMAPVIVRATLGISTAILETSALGFLGLGV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPFAEWGTMLGSGRGYMYNAPHLVFFPGIAITLTVMAFNLLGDGLRDALDPRLRR
CCCHHHHHHHHCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHCC
>Mature Secondary Structure 
PQAQTSAPVPQPAEQTYSPLADFWHRLRKNKLAMVSLIFLLTLTFVAIFAPFVAPYDPY
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LSEMPKALHGPSAQHWLGNDELGRDILSRIIYGAGVSLRVGLIAVCIALSVGMVVGSAAG
HHHCCHHHCCCCCHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
YYGGRLDNIIMRFMDIMLAFPSILLAIALMAVLGRGVENAIIAIGIVSIPEYARIIRGSV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCH
LSVKENEYVQAARAIGNNDFQIIFKHIMPNVMAPVIVRATLGISTAILETSALGFLGLGV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APPFAEWGTMLGSGRGYMYNAPHLVFFPGIAITLTVMAFNLLGDGLRDALDPRLRR
CCCHHHHHHHHCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]