| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is cheB [H]
Identifier: 134300278
GI number: 134300278
Start: 2654850
End: 2655959
Strand: Reverse
Name: cheB [H]
Synonym: Dred_2439
Alternate gene names: 134300278
Gene position: 2655959-2654850 (Counterclockwise)
Preceding gene: 134300279
Following gene: 134300277
Centisome position: 73.61
GC content: 56.31
Gene sequence:
>1110_bases ATGCTGCCGGTTAAAGTCCTGGTGGTGGACGATTCCTCCCTGATGAGGCGGCTGATTAGCCGCCTATTGGAGGAAGACAA AGGAATAAAAGTCATTGGCACCGCTGCGGATGGACTGGAGGCCCTACAACAAATTAAGGCCCTGCGGCCCGATGTGGTAA CCATGGATGTGGAGATGCCCAGGTTGGACGGTATTGCCACCCTGCGCCGCTTGATGGTGGATTTTCCTACACCAGCGGTG ATGCTCAGTGCCCATACCCATGAGGGTGCCCGGGCCACCATGGATGCCCTGTCCGCCGGGGCAGTAGATTTTGTGGCAAA ACCCACTTCCTCCGCTGAATTACCAAGGATGGTGGAGGATCTCAAGACCAAAGTAAAGGTAGCGGCCAGGGTTTCCCTGC GCAGGGTGCGAACCACCCTAACACCGCCGCCGGCACCGCTGGCTCGGCCTAAGCCAGCCACAACAGCCGCCCCTGGGTCA GCTAAAGCGAAGCCCCAGACCCAGGTTCGAAGGCAGCCCTATTGCGGCAAAATTGATCTAGTGGTCATTGGCTGCTCCAC CGGTGGCCCCGCAGCCCTGCAGCAAATCATTCCCTACCTGCCTGCCAATTTACCCGCCGGGGTTGTGGTGGTTCAACATA TTCCAGTGGGTTTTTCCAAATCCATGGCAGAGCATTTGGATAAGAAAAGTGCCATCTCGGTACGTCATGCCGCAGAGGGT GATGCAATAAAAGCAGGCCAGGTACTGGTTGCCCCGGCGGGCTACGACTTAAACTTTAAGGCCAAAGGCAACGGCTCCAC CGTTGCCCTGAGTAATCAAGGGGCTCCTTTGGCTCCCGGGGGTTTCCGCCCTTCGGTGGATTGGGTGATGAAATCTGCCG CCGAAGTCTATGGTTGCCGAACCCTAGCCGTACTATTAACTGGGATGGGACGAGACGGTGCCAGAGGGATGCTGGCCATC AAAGAACAGGGTGGCCCTACCATCGCTGAGCACGAAAGTACCTGTGTGGTTTATGGCATGCCCAAGGCAGCCTACGATAT TGGGGCTGCGGGTAAAATGGTACCCTTACCACAGATTGCCCAGGAAATCCAAGCTTTTTTTGATGTTTAA
Upstream 100 bases:
>100_bases CAGGGTCTCTCCGGTGCCTGCATCCTAGGTGATGGCAAAGTGGCCCTCATTGTGGATGTGAGAGGTCTGGTAAAGGATCT CGGGGCTGAGGAGGTAGCCT
Downstream 100 bases:
>100_bases TATAAAGTTAAGGTCTTGAACTGCCGAATACAAAAGTAGAAGAGAGAAGAACAGGGTGATCGCTATGAAAATTAACGGCT ACAAACCAACCGGTGAAGTA
Product: response regulator receiver modulated CheB methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MLPVKVLVVDDSSLMRRLISRLLEEDKGIKVIGTAADGLEALQQIKALRPDVVTMDVEMPRLDGIATLRRLMVDFPTPAV MLSAHTHEGARATMDALSAGAVDFVAKPTSSAELPRMVEDLKTKVKVAARVSLRRVRTTLTPPPAPLARPKPATTAAPGS AKAKPQTQVRRQPYCGKIDLVVIGCSTGGPAALQQIIPYLPANLPAGVVVVQHIPVGFSKSMAEHLDKKSAISVRHAAEG DAIKAGQVLVAPAGYDLNFKAKGNGSTVALSNQGAPLAPGGFRPSVDWVMKSAAEVYGCRTLAVLLTGMGRDGARGMLAI KEQGGPTIAEHESTCVVYGMPKAAYDIGAAGKMVPLPQIAQEIQAFFDV
Sequences:
>Translated_369_residues MLPVKVLVVDDSSLMRRLISRLLEEDKGIKVIGTAADGLEALQQIKALRPDVVTMDVEMPRLDGIATLRRLMVDFPTPAV MLSAHTHEGARATMDALSAGAVDFVAKPTSSAELPRMVEDLKTKVKVAARVSLRRVRTTLTPPPAPLARPKPATTAAPGS AKAKPQTQVRRQPYCGKIDLVVIGCSTGGPAALQQIIPYLPANLPAGVVVVQHIPVGFSKSMAEHLDKKSAISVRHAAEG DAIKAGQVLVAPAGYDLNFKAKGNGSTVALSNQGAPLAPGGFRPSVDWVMKSAAEVYGCRTLAVLLTGMGRDGARGMLAI KEQGGPTIAEHESTCVVYGMPKAAYDIGAAGKMVPLPQIAQEIQAFFDV >Mature_369_residues MLPVKVLVVDDSSLMRRLISRLLEEDKGIKVIGTAADGLEALQQIKALRPDVVTMDVEMPRLDGIATLRRLMVDFPTPAV MLSAHTHEGARATMDALSAGAVDFVAKPTSSAELPRMVEDLKTKVKVAARVSLRRVRTTLTPPPAPLARPKPATTAAPGS AKAKPQTQVRRQPYCGKIDLVVIGCSTGGPAALQQIIPYLPANLPAGVVVVQHIPVGFSKSMAEHLDKKSAISVRHAAEG DAIKAGQVLVAPAGYDLNFKAKGNGSTVALSNQGAPLAPGGFRPSVDWVMKSAAEVYGCRTLAVLLTGMGRDGARGMLAI KEQGGPTIAEHESTCVVYGMPKAAYDIGAAGKMVPLPQIAQEIQAFFDV
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR [H]
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788192, Length=367, Percent_Identity=36.5122615803815, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI87082052, Length=121, Percent_Identity=28.9256198347107, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 [H]
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg [H]
EC number: =3.1.1.61 [H]
Molecular weight: Translated: 38843; Mature: 38843
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPVKVLVVDDSSLMRRLISRLLEEDKGIKVIGTAADGLEALQQIKALRPDVVTMDVEMP CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEECCCC RLDGIATLRRLMVDFPTPAVMLSAHTHEGARATMDALSAGAVDFVAKPTSSAELPRMVED CCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LKTKVKVAARVSLRRVRTTLTPPPAPLARPKPATTAAPGSAKAKPQTQVRRQPYCGKIDL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE VVIGCSTGGPAALQQIIPYLPANLPAGVVVVQHIPVGFSKSMAEHLDKKSAISVRHAAEG EEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHEEEEECCCC DAIKAGQVLVAPAGYDLNFKAKGNGSTVALSNQGAPLAPGGFRPSVDWVMKSAAEVYGCR CCEECCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TLAVLLTGMGRDGARGMLAIKEQGGPTIAEHESTCVVYGMPKAAYDIGAAGKMVPLPQIA HHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEECCHHHHHCCCCCCCCCCHHHH QEIQAFFDV HHHHHHHCC >Mature Secondary Structure MLPVKVLVVDDSSLMRRLISRLLEEDKGIKVIGTAADGLEALQQIKALRPDVVTMDVEMP CCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEECCCC RLDGIATLRRLMVDFPTPAVMLSAHTHEGARATMDALSAGAVDFVAKPTSSAELPRMVED CCCHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH LKTKVKVAARVSLRRVRTTLTPPPAPLARPKPATTAAPGSAKAKPQTQVRRQPYCGKIDL HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEE VVIGCSTGGPAALQQIIPYLPANLPAGVVVVQHIPVGFSKSMAEHLDKKSAISVRHAAEG EEEECCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHCCHHHHEEEEECCCC DAIKAGQVLVAPAGYDLNFKAKGNGSTVALSNQGAPLAPGGFRPSVDWVMKSAAEVYGCR CCEECCCEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH TLAVLLTGMGRDGARGMLAIKEQGGPTIAEHESTCVVYGMPKAAYDIGAAGKMVPLPQIA HHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCEEEEEECCHHHHHCCCCCCCCCCHHHH QEIQAFFDV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA