| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300243
Identifier: 134300243
GI number: 134300243
Start: 2625291
End: 2625740
Strand: Reverse
Name: 134300243
Synonym: Dred_2404
Alternate gene names: NA
Gene position: 2625740-2625291 (Counterclockwise)
Preceding gene: 134300244
Following gene: 134300242
Centisome position: 72.77
GC content: 40.89
Gene sequence:
>450_bases TTGAAAAAGTTTCATTTTAGGCTAGAACAAGTACTGCAACAAAAAATAAAACAAGAGGAACAAGCCTTATTGGAACAAGC TAAGGCCCAAGAAGAATACAGTAGGTGTGAAAAGGAGTTAGCTGCAACCAGGGATAAGCTTGAGGAATCTTATCAAACTG CACAATTGGGTTTAAGACCCGAGGATCAGCTCTACATGTTAATGTTTCGGGACAGCTTGCGGGAACTCAGAGAAAGGCAG ATGAGGAATCTGCAAAGGGCCAATGAAATCTTGCAAAACCGGATCAAGATTAGCATGAAAGCCCGGCAGGAACGGAAGAT ATTTGAGAAGTTAAAGGAAAAACAACTGATGGAGTATAGGGAATTACAGTTATTCTTGGAGCAAAAAGAAATTGATGAGT TAGCTACCATGAGTTATGCCAGAGGTACTCATCAGTCAGGGGTGTTTTAG
Upstream 100 bases:
>100_bases ATGACGAGATCATAGGCTATTTAAGACAGTCGCCTTTAGAATATAGCAGCTATGAGGAAACATTAAATGGACTAGCAGAC CTGGTGGGAGGTAGCTAACC
Downstream 100 bases:
>100_bases ACAAAAAGCAGCTAATTGTATTGTACTGAAAGGGGGTGAAAAATATTCAGATAAGTAAACTTCATTCTGGACAGGAAGTT CTCACACAAGGGGCAGTTGG
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: Flagellar Export Protein FliJ
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MKKFHFRLEQVLQQKIKQEEQALLEQAKAQEEYSRCEKELAATRDKLEESYQTAQLGLRPEDQLYMLMFRDSLRELRERQ MRNLQRANEILQNRIKISMKARQERKIFEKLKEKQLMEYRELQLFLEQKEIDELATMSYARGTHQSGVF
Sequences:
>Translated_149_residues MKKFHFRLEQVLQQKIKQEEQALLEQAKAQEEYSRCEKELAATRDKLEESYQTAQLGLRPEDQLYMLMFRDSLRELRERQ MRNLQRANEILQNRIKISMKARQERKIFEKLKEKQLMEYRELQLFLEQKEIDELATMSYARGTHQSGVF >Mature_149_residues MKKFHFRLEQVLQQKIKQEEQALLEQAKAQEEYSRCEKELAATRDKLEESYQTAQLGLRPEDQLYMLMFRDSLRELRERQ MRNLQRANEILQNRIKISMKARQERKIFEKLKEKQLMEYRELQLFLEQKEIDELATMSYARGTHQSGVF
Specific function: Unknown
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18146; Mature: 18146
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFHFRLEQVLQQKIKQEEQALLEQAKAQEEYSRCEKELAATRDKLEESYQTAQLGLRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDQLYMLMFRDSLRELRERQMRNLQRANEILQNRIKISMKARQERKIFEKLKEKQLMEYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQLFLEQKEIDELATMSYARGTHQSGVF HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKFHFRLEQVLQQKIKQEEQALLEQAKAQEEYSRCEKELAATRDKLEESYQTAQLGLRP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC EDQLYMLMFRDSLRELRERQMRNLQRANEILQNRIKISMKARQERKIFEKLKEKQLMEYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELQLFLEQKEIDELATMSYARGTHQSGVF HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA