| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300242
Identifier: 134300242
GI number: 134300242
Start: 2623513
End: 2625255
Strand: Reverse
Name: 134300242
Synonym: Dred_2403
Alternate gene names: NA
Gene position: 2625255-2623513 (Counterclockwise)
Preceding gene: 134300243
Following gene: 134300241
Centisome position: 72.76
GC content: 45.27
Gene sequence:
>1743_bases GTGAAAAATATTCAGATAAGTAAACTTCATTCTGGACAGGAAGTTCTCACACAAGGGGCAGTTGGCAAGGGAATAAAAGG TGATGGCTTTGCGGCGTTATTAGATTGCCTTTTAGGTTCTGATGGTAATCAAGTGATACTAGCTGACGAGACGGCTAAGC CAGATCTTTTTCAAACTGCCGATTCAGTGACAGGTTTTATTTATCCTGGCATGGTAATAGAACATGAGGGAGTAGATCAG GAACAAAGTCAAGAAGAAACGATTCTTAAACTAACCTCGGAACAGGCTACTGGAAAAGAACAAAGTTTGGAAGTGGCTGA GCCAGTAGTACCAGTTTTACCACTAAGCATAACAAAGGATTTTTCTGCCAAGACCAACCATGAGCAAGGGGACATAGTTG AAGGTACGGTCAATCAAATAGGGATATTGAATAGCACCGACCCCAATGTATCCCCAGAGGTTGCTATGGCTGTCAAGGCT ACTGGTACTGAATTACCTGAGATGATCCTTGAGGACCCAAAATCCAATTCAATGACTGATGGAAAAAAAGCACAGGATCA GGAGGTGCCCCAAGGTAAAGTAATTGTTCCTCTGGAGGAATTTGTTTCTCAAGAGGGTGAAGATGCTAAGATTCCAGGGA ACCCAGTGCAGCCTGTTACTGAGGGAAAGGAAGAGGGTAAAGAGGCTGCTGCACTGATCACTCAGAGTCAAAGGGGATTG CAGGCTGGGCAAATGGTAAATCAAAGGATTATGCCAACGAGTGATTTAGCAAAGCCACAGCAAAGGGATGTTATACCAGT GATACAGGAACAGGCACCCGTAATCACCGACCTTAACTCTGGTACATCATCGGGTAAGGCTATACCCTCTTTGCCTGACA ACCAAGAGGATGCTATAAAAATTATTGAGTTAATACCTAACTTTATTAAAAAAGCAGATGTTAGGGGCAAGGATACCACG GACCAAATTGTCGGGCAAACCCTAGAGGTTCAAGCAGAGGGGGATACCTCCTCGGAACAGGAATTGGCGCAGCCAGTTAG ACCTTTAATGGATAAAGCAGCTAAAGCAACTAACTCTCTAGAATTTGAGAGAAATTCCCTTGATAAAGGTTTAGGCAATC ATGGTAACCAAGGTGCTGCTGACAAAGTACAAGCTGGGATGAAGGAAGAAGTGAAAAGTTTATCCATACAGGATAACCTA AAGCGGGATAACCCAGAGCTAAGTAACCAGGATTCATTGCAAACTAGTGGTATGAAGGGCATGGATGTCGGTAGTAACAG CCTGGTAAAGGAGGTTTCTCTAACACAGCTGCCCGCCAAGCTGCAGGAAATGGTGAAGTCTTTACTGGTACAGCAGCAGT CAGGCCAGACCACCCTAAAGATGAAGCTACAACCAGAACACTTAGGTGAAGTGACGGTTAAATTAACCTGGTCTAAGGGG GAACTTTCCGCACAGTTTGTTACCTCCTCTGGTATGGCAAAGGAAGCCCTGGAAACCACCTTTCCCCAGCTCAGGGAACT ACTGGCCCAACAAAATATCCGGTTAAGTGAAGCTGCCGTATTCATGGGGCAACAAAGTAACGGGCAAGGGGGTCAGAATA CCTTTGCAGAAAGGCAGCGCTGGCAAGAGAGCAGTCAGAAAAGAGGCAAAGGGCAGTACACAGGCTTAACTCTGGTGGAA GAGACGTTACCTTCCAGTAGTGAACAGCGATCTGCCAGTTCTGGTTTGAATCTTATTGTGTAA
Upstream 100 bases:
>100_bases AAGAAATTGATGAGTTAGCTACCATGAGTTATGCCAGAGGTACTCATCAGTCAGGGGTGTTTTAGACAAAAAGCAGCTAA TTGTATTGTACTGAAAGGGG
Downstream 100 bases:
>100_bases GGGGGTGGAGCAATGGAAGTTAATCAGACTAACAATAGCGATTTATATTATGAAAATAGAAAAACAAAAGAATCTGTGAA AACCTTGGATAAAGATGCTT
Product: flagellar hook-length control protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE ETLPSSSEQRSASSGLNLIV
Sequences:
>Translated_580_residues MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE ETLPSSSEQRSASSGLNLIV >Mature_580_residues MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE ETLPSSSEQRSASSGLNLIV
Specific function: Unknown
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62422; Mature: 62422
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTA CCCCEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH DSVTGFIYPGMVIEHEGVDQEQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKD HHHCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCC FSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKATGTELPEMILEDPKSNSMTD CCCCCCCCCCCEEECCHHHEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC GKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL CCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIK HHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH IIELIPNFIKKADVRGKDTTDQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSL HHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC EFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNLKRDNPELSNQDSLQTSGMKG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCC MDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCEEEEEEECCC ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQR CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHHHHHH WQESSQKRGKGQYTGLTLVEETLPSSSEQRSASSGLNLIV HHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEECC >Mature Secondary Structure MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTA CCCCEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH DSVTGFIYPGMVIEHEGVDQEQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKD HHHCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCC FSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKATGTELPEMILEDPKSNSMTD CCCCCCCCCCCEEECCHHHEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC GKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL CCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIK HHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH IIELIPNFIKKADVRGKDTTDQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSL HHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC EFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNLKRDNPELSNQDSLQTSGMKG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCC MDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCEEEEEEECCC ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQR CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHHHHHH WQESSQKRGKGQYTGLTLVEETLPSSSEQRSASSGLNLIV HHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA