Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300242

Identifier: 134300242

GI number: 134300242

Start: 2623513

End: 2625255

Strand: Reverse

Name: 134300242

Synonym: Dred_2403

Alternate gene names: NA

Gene position: 2625255-2623513 (Counterclockwise)

Preceding gene: 134300243

Following gene: 134300241

Centisome position: 72.76

GC content: 45.27

Gene sequence:

>1743_bases
GTGAAAAATATTCAGATAAGTAAACTTCATTCTGGACAGGAAGTTCTCACACAAGGGGCAGTTGGCAAGGGAATAAAAGG
TGATGGCTTTGCGGCGTTATTAGATTGCCTTTTAGGTTCTGATGGTAATCAAGTGATACTAGCTGACGAGACGGCTAAGC
CAGATCTTTTTCAAACTGCCGATTCAGTGACAGGTTTTATTTATCCTGGCATGGTAATAGAACATGAGGGAGTAGATCAG
GAACAAAGTCAAGAAGAAACGATTCTTAAACTAACCTCGGAACAGGCTACTGGAAAAGAACAAAGTTTGGAAGTGGCTGA
GCCAGTAGTACCAGTTTTACCACTAAGCATAACAAAGGATTTTTCTGCCAAGACCAACCATGAGCAAGGGGACATAGTTG
AAGGTACGGTCAATCAAATAGGGATATTGAATAGCACCGACCCCAATGTATCCCCAGAGGTTGCTATGGCTGTCAAGGCT
ACTGGTACTGAATTACCTGAGATGATCCTTGAGGACCCAAAATCCAATTCAATGACTGATGGAAAAAAAGCACAGGATCA
GGAGGTGCCCCAAGGTAAAGTAATTGTTCCTCTGGAGGAATTTGTTTCTCAAGAGGGTGAAGATGCTAAGATTCCAGGGA
ACCCAGTGCAGCCTGTTACTGAGGGAAAGGAAGAGGGTAAAGAGGCTGCTGCACTGATCACTCAGAGTCAAAGGGGATTG
CAGGCTGGGCAAATGGTAAATCAAAGGATTATGCCAACGAGTGATTTAGCAAAGCCACAGCAAAGGGATGTTATACCAGT
GATACAGGAACAGGCACCCGTAATCACCGACCTTAACTCTGGTACATCATCGGGTAAGGCTATACCCTCTTTGCCTGACA
ACCAAGAGGATGCTATAAAAATTATTGAGTTAATACCTAACTTTATTAAAAAAGCAGATGTTAGGGGCAAGGATACCACG
GACCAAATTGTCGGGCAAACCCTAGAGGTTCAAGCAGAGGGGGATACCTCCTCGGAACAGGAATTGGCGCAGCCAGTTAG
ACCTTTAATGGATAAAGCAGCTAAAGCAACTAACTCTCTAGAATTTGAGAGAAATTCCCTTGATAAAGGTTTAGGCAATC
ATGGTAACCAAGGTGCTGCTGACAAAGTACAAGCTGGGATGAAGGAAGAAGTGAAAAGTTTATCCATACAGGATAACCTA
AAGCGGGATAACCCAGAGCTAAGTAACCAGGATTCATTGCAAACTAGTGGTATGAAGGGCATGGATGTCGGTAGTAACAG
CCTGGTAAAGGAGGTTTCTCTAACACAGCTGCCCGCCAAGCTGCAGGAAATGGTGAAGTCTTTACTGGTACAGCAGCAGT
CAGGCCAGACCACCCTAAAGATGAAGCTACAACCAGAACACTTAGGTGAAGTGACGGTTAAATTAACCTGGTCTAAGGGG
GAACTTTCCGCACAGTTTGTTACCTCCTCTGGTATGGCAAAGGAAGCCCTGGAAACCACCTTTCCCCAGCTCAGGGAACT
ACTGGCCCAACAAAATATCCGGTTAAGTGAAGCTGCCGTATTCATGGGGCAACAAAGTAACGGGCAAGGGGGTCAGAATA
CCTTTGCAGAAAGGCAGCGCTGGCAAGAGAGCAGTCAGAAAAGAGGCAAAGGGCAGTACACAGGCTTAACTCTGGTGGAA
GAGACGTTACCTTCCAGTAGTGAACAGCGATCTGCCAGTTCTGGTTTGAATCTTATTGTGTAA

Upstream 100 bases:

>100_bases
AAGAAATTGATGAGTTAGCTACCATGAGTTATGCCAGAGGTACTCATCAGTCAGGGGTGTTTTAGACAAAAAGCAGCTAA
TTGTATTGTACTGAAAGGGG

Downstream 100 bases:

>100_bases
GGGGGTGGAGCAATGGAAGTTAATCAGACTAACAATAGCGATTTATATTATGAAAATAGAAAAACAAAAGAATCTGTGAA
AACCTTGGATAAAGATGCTT

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ
EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA
TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL
QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT
DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL
KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG
ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE
ETLPSSSEQRSASSGLNLIV

Sequences:

>Translated_580_residues
MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ
EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA
TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL
QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT
DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL
KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG
ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE
ETLPSSSEQRSASSGLNLIV
>Mature_580_residues
MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTADSVTGFIYPGMVIEHEGVDQ
EQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKDFSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKA
TGTELPEMILEDPKSNSMTDGKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL
QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIKIIELIPNFIKKADVRGKDTT
DQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSLEFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNL
KRDNPELSNQDSLQTSGMKGMDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG
ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQRWQESSQKRGKGQYTGLTLVE
ETLPSSSEQRSASSGLNLIV

Specific function: Unknown

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62422; Mature: 62422

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTA
CCCCEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
DSVTGFIYPGMVIEHEGVDQEQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKD
HHHCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCC
FSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKATGTELPEMILEDPKSNSMTD
CCCCCCCCCCCEEECCHHHEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC
GKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL
CCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIK
HHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
IIELIPNFIKKADVRGKDTTDQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSL
HHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
EFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNLKRDNPELSNQDSLQTSGMKG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCC
MDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCEEEEEEECCC
ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQR
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHHHHHH
WQESSQKRGKGQYTGLTLVEETLPSSSEQRSASSGLNLIV
HHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEECC
>Mature Secondary Structure
MKNIQISKLHSGQEVLTQGAVGKGIKGDGFAALLDCLLGSDGNQVILADETAKPDLFQTA
CCCCEEHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH
DSVTGFIYPGMVIEHEGVDQEQSQEETILKLTSEQATGKEQSLEVAEPVVPVLPLSITKD
HHHCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCC
FSAKTNHEQGDIVEGTVNQIGILNSTDPNVSPEVAMAVKATGTELPEMILEDPKSNSMTD
CCCCCCCCCCCEEECCHHHEEEECCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCC
GKKAQDQEVPQGKVIVPLEEFVSQEGEDAKIPGNPVQPVTEGKEEGKEAAALITQSQRGL
CCCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH
QAGQMVNQRIMPTSDLAKPQQRDVIPVIQEQAPVITDLNSGTSSGKAIPSLPDNQEDAIK
HHHHHHHHCCCCCHHHCCCCCCCCCHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHHHH
IIELIPNFIKKADVRGKDTTDQIVGQTLEVQAEGDTSSEQELAQPVRPLMDKAAKATNSL
HHHHHHHHHHHCCCCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
EFERNSLDKGLGNHGNQGAADKVQAGMKEEVKSLSIQDNLKRDNPELSNQDSLQTSGMKG
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCHHHCCCCC
MDVGSNSLVKEVSLTQLPAKLQEMVKSLLVQQQSGQTTLKMKLQPEHLGEVTVKLTWSKG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHCCCCEEEEEEECCC
ELSAQFVTSSGMAKEALETTFPQLRELLAQQNIRLSEAAVFMGQQSNGQGGQNTFAERQR
CCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCCCCCCHHHHHHHH
WQESSQKRGKGQYTGLTLVEETLPSSSEQRSASSGLNLIV
HHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA