| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is hisD [H]
Identifier: 134300194
GI number: 134300194
Start: 2575163
End: 2576455
Strand: Reverse
Name: hisD [H]
Synonym: Dred_2355
Alternate gene names: 134300194
Gene position: 2576455-2575163 (Counterclockwise)
Preceding gene: 134300195
Following gene: 134300193
Centisome position: 71.41
GC content: 50.19
Gene sequence:
>1293_bases ATGGAAATGATTAGAGTTATTAAGTCCTCAGATGAGGAAAAAATAGCCAGCTTATTAAATAACAGAATAGACACCCAGGC GGAGGTGGCCCAACGGGTTGCTTCTATTATGCAAGAGGTGAGAGAACAGGGAGATAAAGCCCTATGTTTTTTTGCCCGGC GTTTTGATAAAGCAAGTCTGGAACCAACAAGTTTAAAGGTAACTCCGGAGGAAATTGAAGCAGCCTACCAGCAAGTGGAC CCGGAGATTTTAGCATCCCTGCGTCTGGCCAAGCAGCGGATTGAAAACTTTCATCAGAAGCAACTGACCCGTTCCTGGTT CCAACCAGATCCAGAGGGCAGCGTCCTAGGTCAGTTGATTACTCCATTGGATCGGGTGGGTATTTATGTTCCCGGTGGAA CCGCTTCTTATCCATCTTCAGTATTGATGAATGCTATTCCCGCTAAAGTAGCTGGGGTTACACAAATTGTTATGGTTACG CCACCCATGAACGATGGAAAGATCAATCCGTATACCCTGGTGGCTGCGGCAGAAGCCGAAGTCGATGACATCTATAAAGT GGGTGGAGCCCAGGCCGTTGCTGCCCTGGCCTATGGCACAGAAACCATTGCTCCGGTGGATAAAATCACAGGACCCGGCA ACATCTATGTAACCCTGGCCAAACGGATGGTTTATGGGGTAGTGGGTATTGACATGCTGGCAGGTCCCAGTGAAGTGTTG GTGGTGGCAGATGGCACTGCTAAACCTGACTGTGCGGCTGCGGATATGCTCTCCCAGGCTGAGCATGATCCCATGGCATC GGCCATTTTACTAACTCACGATACTGCCTTGGCGGAGGCCGTTAGCATGGAATTAGAACGACAGTTGGCTGAATTGCCTA GACAGGAAATTGCTCGTCAGTCCTTGTCCAATCATAGTGCCATCATTTTAACAGAAAGCATCGACGAATCTCTGCAGTGG GCCAACCGCTTTGCTCCGGAGCATCTGGAACTGTTGCTGAACGAACCAGTTAAGTACTTAGGCAAAGTTAAACATGCCGG AGCTGTTTTCCTGGGTCACTATTCCCCGGAACCGGTGGGAGATTATCTGGCGGGTCCCAACCATGTCCTGCCCACCGGCG GCACAGCCCGCTTTTACTCACCACTGAATGTGGATACCTTTATGAAAAAAACCAGCGTGATCGGCTTTTCGGAAGAAAGC TTGCAGAAGCTGGGACCGGACATTATTCGTCTGGCCGAGGTAGAGGGACTGCAGGCCCACGCCAACGCTGTGAAGGTACG TTTGGGTAAATAG
Upstream 100 bases:
>100_bases ACCCGCTTGATTGCTAACCGGGTCAGTCACCGCTTAAAGAGCGAACGGATAAATCCCCTAGTAGATAGAATGCGGCAAGT TGTGGAGGAGGGGAAGCTAA
Downstream 100 bases:
>100_bases ATTGACAAGAAGGTATTTGCTATCGGTGCGGAGACCGGAGCTAATGGGGATAACTTAAATATTAGATGTGTATATATTCA TTGCACCGAAGAAAAACTGG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MEMIRVIKSSDEEKIASLLNNRIDTQAEVAQRVASIMQEVREQGDKALCFFARRFDKASLEPTSLKVTPEEIEAAYQQVD PEILASLRLAKQRIENFHQKQLTRSWFQPDPEGSVLGQLITPLDRVGIYVPGGTASYPSSVLMNAIPAKVAGVTQIVMVT PPMNDGKINPYTLVAAAEAEVDDIYKVGGAQAVAALAYGTETIAPVDKITGPGNIYVTLAKRMVYGVVGIDMLAGPSEVL VVADGTAKPDCAAADMLSQAEHDPMASAILLTHDTALAEAVSMELERQLAELPRQEIARQSLSNHSAIILTESIDESLQW ANRFAPEHLELLLNEPVKYLGKVKHAGAVFLGHYSPEPVGDYLAGPNHVLPTGGTARFYSPLNVDTFMKKTSVIGFSEES LQKLGPDIIRLAEVEGLQAHANAVKVRLGK
Sequences:
>Translated_430_residues MEMIRVIKSSDEEKIASLLNNRIDTQAEVAQRVASIMQEVREQGDKALCFFARRFDKASLEPTSLKVTPEEIEAAYQQVD PEILASLRLAKQRIENFHQKQLTRSWFQPDPEGSVLGQLITPLDRVGIYVPGGTASYPSSVLMNAIPAKVAGVTQIVMVT PPMNDGKINPYTLVAAAEAEVDDIYKVGGAQAVAALAYGTETIAPVDKITGPGNIYVTLAKRMVYGVVGIDMLAGPSEVL VVADGTAKPDCAAADMLSQAEHDPMASAILLTHDTALAEAVSMELERQLAELPRQEIARQSLSNHSAIILTESIDESLQW ANRFAPEHLELLLNEPVKYLGKVKHAGAVFLGHYSPEPVGDYLAGPNHVLPTGGTARFYSPLNVDTFMKKTSVIGFSEES LQKLGPDIIRLAEVEGLQAHANAVKVRLGK >Mature_430_residues MEMIRVIKSSDEEKIASLLNNRIDTQAEVAQRVASIMQEVREQGDKALCFFARRFDKASLEPTSLKVTPEEIEAAYQQVD PEILASLRLAKQRIENFHQKQLTRSWFQPDPEGSVLGQLITPLDRVGIYVPGGTASYPSSVLMNAIPAKVAGVTQIVMVT PPMNDGKINPYTLVAAAEAEVDDIYKVGGAQAVAALAYGTETIAPVDKITGPGNIYVTLAKRMVYGVVGIDMLAGPSEVL VVADGTAKPDCAAADMLSQAEHDPMASAILLTHDTALAEAVSMELERQLAELPRQEIARQSLSNHSAIILTESIDESLQW ANRFAPEHLELLLNEPVKYLGKVKHAGAVFLGHYSPEPVGDYLAGPNHVLPTGGTARFYSPLNVDTFMKKTSVIGFSEES LQKLGPDIIRLAEVEGLQAHANAVKVRLGK
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=420, Percent_Identity=42.1428571428571, Blast_Score=301, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6319819, Length=438, Percent_Identity=39.4977168949772, Blast_Score=292, Evalue=7e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46560; Mature: 46560
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMIRVIKSSDEEKIASLLNNRIDTQAEVAQRVASIMQEVREQGDKALCFFARRFDKASL CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCC EPTSLKVTPEEIEAAYQQVDPEILASLRLAKQRIENFHQKQLTRSWFQPDPEGSVLGQLI CCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TPLDRVGIYVPGGTASYPSSVLMNAIPAKVAGVTQIVMVTPPMNDGKINPYTLVAAAEAE CCHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCC VDDIYKVGGAQAVAALAYGTETIAPVDKITGPGNIYVTLAKRMVYGVVGIDMLAGPSEVL HHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEE VVADGTAKPDCAAADMLSQAEHDPMASAILLTHDTALAEAVSMELERQLAELPRQEIARQ EEECCCCCCCHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHH SLSNHSAIILTESIDESLQWANRFAPEHLELLLNEPVKYLGKVKHAGAVFLGHYSPEPVG HHCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH DYLAGPNHVLPTGGTARFYSPLNVDTFMKKTSVIGFSEESLQKLGPDIIRLAEVEGLQAH HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCHHHH ANAVKVRLGK CCEEEEEECC >Mature Secondary Structure MEMIRVIKSSDEEKIASLLNNRIDTQAEVAQRVASIMQEVREQGDKALCFFARRFDKASL CCHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCCC EPTSLKVTPEEIEAAYQQVDPEILASLRLAKQRIENFHQKQLTRSWFQPDPEGSVLGQLI CCCEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH TPLDRVGIYVPGGTASYPSSVLMNAIPAKVAGVTQIVMVTPPMNDGKINPYTLVAAAEAE CCHHHCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEECCCC VDDIYKVGGAQAVAALAYGTETIAPVDKITGPGNIYVTLAKRMVYGVVGIDMLAGPSEVL HHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCEE VVADGTAKPDCAAADMLSQAEHDPMASAILLTHDTALAEAVSMELERQLAELPRQEIARQ EEECCCCCCCHHHHHHHHHHCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHH SLSNHSAIILTESIDESLQWANRFAPEHLELLLNEPVKYLGKVKHAGAVFLGHYSPEPVG HHCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCH DYLAGPNHVLPTGGTARFYSPLNVDTFMKKTSVIGFSEESLQKLGPDIIRLAEVEGLQAH HHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCHHHHHHHHHCCHHHH ANAVKVRLGK CCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12446909 [H]