Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

Click here to switch to the map view.

The map label for this gene is 134300133

Identifier: 134300133

GI number: 134300133

Start: 2509102

End: 2509506

Strand: Reverse

Name: 134300133

Synonym: Dred_2294

Alternate gene names: NA

Gene position: 2509506-2509102 (Counterclockwise)

Preceding gene: 134300139

Following gene: 134300132

Centisome position: 69.55

GC content: 40.74

Gene sequence:

>405_bases
GTGTTTATGCATGATAAAAGGTTATTAGAAATGGTTAGAGTTGAAAGGCCAAATCCTACCTATGCTGCTATGTTATCTGA
ACAGTTGGGAGCTGCCTATGTTAATGCCACTGGCGATTTAGCAGCGGACCTATTATCAAATATTGCTGCTGAACAACGGG
CAAAGGTTGTGTATGAATACCTGCACCGACAAATTGGGGATAGGTATGTTAGAGAAATGATTGACTTTTTACTTAATCGC
GAGGAAGCCCATAACACCCTCTTTAGACAGGCCCTAAATAAAGTTCAGCAAAGTGGTTCTAACAGGGATTGGGGTGTGGA
CCAAGATGCCAGATTATATTTTAATCTATCAAATCCTGGGAATAACTCCTTTAGTGTATCAAATCCCAATGGAGGAGGAC
ATTAG

Upstream 100 bases:

>100_bases
CAATATGAATTCTAACAGCATTTTAATTACATCATCTTTTTTTTGGGCAACAATAGGTTTAACTGGCGGAACTTAAATTT
TTGAAAAGGAGCGATGACAA

Downstream 100 bases:

>100_bases
TAAAATATAATATTTTAAAAGTATCTGGACTTGATTTTCAAGTCCTTTTGTTTGGCTATAAAGGTTTAATGGTAATTAAT
CTAATGTGTTACATTAAATA

Product: catalase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MFMHDKRLLEMVRVERPNPTYAAMLSEQLGAAYVNATGDLAADLLSNIAAEQRAKVVYEYLHRQIGDRYVREMIDFLLNR
EEAHNTLFRQALNKVQQSGSNRDWGVDQDARLYFNLSNPGNNSFSVSNPNGGGH

Sequences:

>Translated_134_residues
MFMHDKRLLEMVRVERPNPTYAAMLSEQLGAAYVNATGDLAADLLSNIAAEQRAKVVYEYLHRQIGDRYVREMIDFLLNR
EEAHNTLFRQALNKVQQSGSNRDWGVDQDARLYFNLSNPGNNSFSVSNPNGGGH
>Mature_134_residues
MFMHDKRLLEMVRVERPNPTYAAMLSEQLGAAYVNATGDLAADLLSNIAAEQRAKVVYEYLHRQIGDRYVREMIDFLLNR
EEAHNTLFRQALNKVQQSGSNRDWGVDQDARLYFNLSNPGNNSFSVSNPNGGGH

Specific function: Unknown

COG id: COG3546

COG function: function code P; Mn-containing catalase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the manganese catalase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007760
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05067 Mn_catalase [H]

EC number: =1.11.1.6 [H]

Molecular weight: Translated: 15202; Mature: 15202

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMHDKRLLEMVRVERPNPTYAAMLSEQLGAAYVNATGDLAADLLSNIAAEQRAKVVYEY
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LHRQIGDRYVREMIDFLLNREEAHNTLFRQALNKVQQSGSNRDWGVDQDARLYFNLSNPG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
NNSFSVSNPNGGGH
CCCEEECCCCCCCC
>Mature Secondary Structure
MFMHDKRLLEMVRVERPNPTYAAMLSEQLGAAYVNATGDLAADLLSNIAAEQRAKVVYEY
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LHRQIGDRYVREMIDFLLNREEAHNTLFRQALNKVQQSGSNRDWGVDQDARLYFNLSNPG
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCC
NNSFSVSNPNGGGH
CCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]