| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300060
Identifier: 134300060
GI number: 134300060
Start: 2426850
End: 2427236
Strand: Reverse
Name: 134300060
Synonym: Dred_2217
Alternate gene names: NA
Gene position: 2427236-2426850 (Counterclockwise)
Preceding gene: 134300061
Following gene: 134300059
Centisome position: 67.27
GC content: 38.5
Gene sequence:
>387_bases GTGGCAAGGCCTAAAAAATGGAGAAGAGTATGCATATTACCAGAAGTTAATACTTTTGGTCCCATAGATATATCTGAAAG TACAAGGGAGTACATTCATATGACAGTGGAAGAATATGAAACCATAAGACTAATGGATTTGGAGGGCTTAAATCAGGAAG AGAGTGCGGATGTAATGGGGGTTGCTCGTTCAACAATACAGAGAATCTATGACAATGCTCGAAAAAAACTAGCCGAGAGT CTGGTCAATGGCAAGGTGCTAAAAATAGAGGGTGGTGATTACAAGCTCTGTAATGAATTTGATGATCAGAGGCAATGTAA TAGACGAACTTGTCGCAGGAATAAGCATAAAGATAATGTTTTAATAGCTATTCGCGAGTGTAAATGA
Upstream 100 bases:
>100_bases ACCAGAAGACTACTCTTGGCGCAAAGAGAGGTGGGATTACTTCACCAATATAAAGATTATGTGATAATATAGTTGAGTAA AATTGTGGAGGTGAAGGAAC
Downstream 100 bases:
>100_bases ATAAATGCAAGTGGAAAAGAAAAAGATTTCAGACCTCCAACTGAAATCTTTTTTTGGCAAGTCAGAAAGAATAAAACTTC CCGACTTGCATAATGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MARPKKWRRVCILPEVNTFGPIDISESTREYIHMTVEEYETIRLMDLEGLNQEESADVMGVARSTIQRIYDNARKKLAES LVNGKVLKIEGGDYKLCNEFDDQRQCNRRTCRRNKHKDNVLIAIRECK
Sequences:
>Translated_128_residues MARPKKWRRVCILPEVNTFGPIDISESTREYIHMTVEEYETIRLMDLEGLNQEESADVMGVARSTIQRIYDNARKKLAES LVNGKVLKIEGGDYKLCNEFDDQRQCNRRTCRRNKHKDNVLIAIRECK >Mature_127_residues ARPKKWRRVCILPEVNTFGPIDISESTREYIHMTVEEYETIRLMDLEGLNQEESADVMGVARSTIQRIYDNARKKLAESL VNGKVLKIEGGDYKLCNEFDDQRQCNRRTCRRNKHKDNVLIAIRECK
Specific function: Unknown
COG id: COG1342
COG function: function code R; Predicted DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0251 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002852 [H]
Pfam domain/function: PF02001 DUF134 [H]
EC number: NA
Molecular weight: Translated: 15004; Mature: 14873
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPKKWRRVCILPEVNTFGPIDISESTREYIHMTVEEYETIRLMDLEGLNQEESADVMG CCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH VARSTIQRIYDNARKKLAESLVNGKVLKIEGGDYKLCNEFDDQRQCNRRTCRRNKHKDNV HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCE LIAIRECK EEEEEECC >Mature Secondary Structure ARPKKWRRVCILPEVNTFGPIDISESTREYIHMTVEEYETIRLMDLEGLNQEESADVMG CCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHH VARSTIQRIYDNARKKLAESLVNGKVLKIEGGDYKLCNEFDDQRQCNRRTCRRNKHKDNV HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCHHHHHHHHHHHCCCCCCCE LIAIRECK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA