| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is 134300045
Identifier: 134300045
GI number: 134300045
Start: 2406066
End: 2408297
Strand: Reverse
Name: 134300045
Synonym: Dred_2201
Alternate gene names: NA
Gene position: 2408297-2406066 (Counterclockwise)
Preceding gene: 134300046
Following gene: 134300044
Centisome position: 66.75
GC content: 42.61
Gene sequence:
>2232_bases TTGCCTTACTCTTTCTGGCAAAAAGTCATTGCCAGTTTATTATTTGTATGTGTTACTCTGAGTTTCGTTCATATTGCCAC AGCGGAAGTATCCACAGGTAAGGCAGAAAGAGTTATTCTTGTGGTTATTGATAAACTAACCCTGCAGGACTATGAAGAAG CGGGGTTGGAAAATGTAAAAAAACTGACTAACCGGGGGGCCCTAGGGCTATTAAATAACAATACGGGGGCAGGTATTTAT TCCGAACACACATACCCAACCATAGGAGGAGGAGCTCACTTAATTGGTACAGGGGATGCTCTCAATGGTTTTAACCCAGA AGAGGAGACATTTGACACGAAGGCAAGCAATGAATACATCCGTCGTACTGGGTTTATTGCACCAAAGGATTCCGTAATTC AGTTGGCCCTTGGCAAATTACTTAGAAATAATTCAGAGTTGAATTATTTAGCAACTCCCGGAGCTTTGGGTCAAGCCCTG CAAAATGCTGGTAAAAAGACTGCGGTTATTGGCAACAGCGATACCACAGGTGTTCATAGACGATTAATAACCACCATATC CATGAATAAACAAGGGGTTACGGATATGGGAACAGTAGATCATTCTATTTTGTTGCAACATCAACCCGTGATTGGTTCCT ATCAAACTGATTTTCCTAAAGTGCTGGCTAAAATAGAGGAATACAAGGAAAAGGGAGCTTCTTTAATTGTTGTTGAAACC GGAGACCTCACTCGATTATATGAAGAGAAAGATAAAGCAACCGATCAAGCCTACCAAAGGCAGCGAGAGGATGCCAAGAA TAGAATAGACCGATTTATTGGAAACCTTGTAGGCCAGATGGATTTTAACAAAGAAGTATTACTGGTGATGACACCCACTC CCACCATAGAGGCAGTAAAGGAAAATAAAAACCTGACGCCTATTTTTGCAGTGGGACCACAGTTTGAACCGGGTAGTTTA TTAACCTCCGGGACCACCAAACGGGATGGTATTATTATGAACACCGATATTGCCCCTACCATCCTGAAGTACCTAGGGGT CCAGATTGTGCCGGAAATGTCTGGGCGGCCCTTTATGACTTCCAGTGTAAAATTAGCAGGAAACAGCCTGGAACACCTGC TCAACCTAAATAAAGGGTTGGTCAGTACTTATCAGGCGAGACCACCTCTTCAGTCAGCCTATGTACTTGTACAACTGATC GTACTATTCATGGGTCTTTATGGTATTTTCTTCAAGAAACACATGGCCGAGATGATAAAACCATTTCTGCTTTTAGTTAT GTCAGTTCCATTGGTTGAGCTTGTTATGCCACTTTTACCAAACACATCCGTAGCCATCATGGCAGTGCAGTTGGTTGTAT TAACACTGGCCTTTTCAGGGTTAGCCATTTTGGTTAACCGAAAAATAGGGCTGAATCCCTTCATATTCATATGTATTGCC ACAGCAGGTACGATTTTGATTGACTTAGTAAACGCATCTTATTTGCAGAAGCAATCCATTCTAGGATACGACCCCATTGT AGGGGCGCGTTTTTATGGTATCGGTAATGAATACATGGGTGTGCTAATTGGTTCCTTAATTTTTGGAACCACTGCAGCGG TCCAATACTGTCCAAAGAACAGACGAATCTTAATTCTCCTAAGTGGCTTGGTGTATCTTTTTACTGTCTATGCAATGGCG GCACCCAACATGGGTACCAACGTGGGAGGTACCATTGCAGCAACCGCCGCTTTGTTGGTAACTTTTCTTTTGTTAATGGG TGTACGCTTCCGCTTTCGAACCATTTTAATGGTTGGCTGTTTGGTGGTTCTGGCTGTCAGTGGTTTTATTGCCTTTGACC TAACTCGCCCACCGGATTTACGTTCCCACATGGGTACCACAGCTTCATTATTATTAAAGGATCCCAATTATGCTTTGGAA ATTATTCAACGAAAATGGTCAATGAATATGAAACTCTTGCGGTACACTGTCTGGAGCAGGGTACTGCTGGCAAGTCTAGG TATACTGGCTCTATTGTTTTATCGTCCCCAGGGAGTAATGAAAAACCTGAGAGTAAAATATCCCTATTTGTTTAAAGGAT TTATTGGTGTACTTACTGGTGCCTTGGTAGCCTTTGCCTTTAACGACTCCGGTGTTGTAGCCGCTGCCACCACTATGATT TTTGGTGCACCCCCTTTGGTTTATCTGGTTTTATCCGAACAAAGGCCCAAAAATAAGCATAGAATTATATGA
Upstream 100 bases:
>100_bases AAAAACAATGGATCTATACAAACAATTATTATTAGAAAAGAAAATTAAAACCCAACGTTAGAATTAAACAAACAAAATTA TATAGGTGGGGGGATGGAAT
Downstream 100 bases:
>100_bases GGAATGAAATTAGGGTAGGCCGAGAGAAATCATATACTAGGGAAGAATAATCAGTTAAATACATTAAACACGTGAATTAA GGTGCAAATAAATAAATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 743; Mature: 742
Protein sequence:
>743_residues MPYSFWQKVIASLLFVCVTLSFVHIATAEVSTGKAERVILVVIDKLTLQDYEEAGLENVKKLTNRGALGLLNNNTGAGIY SEHTYPTIGGGAHLIGTGDALNGFNPEEETFDTKASNEYIRRTGFIAPKDSVIQLALGKLLRNNSELNYLATPGALGQAL QNAGKKTAVIGNSDTTGVHRRLITTISMNKQGVTDMGTVDHSILLQHQPVIGSYQTDFPKVLAKIEEYKEKGASLIVVET GDLTRLYEEKDKATDQAYQRQREDAKNRIDRFIGNLVGQMDFNKEVLLVMTPTPTIEAVKENKNLTPIFAVGPQFEPGSL LTSGTTKRDGIIMNTDIAPTILKYLGVQIVPEMSGRPFMTSSVKLAGNSLEHLLNLNKGLVSTYQARPPLQSAYVLVQLI VLFMGLYGIFFKKHMAEMIKPFLLLVMSVPLVELVMPLLPNTSVAIMAVQLVVLTLAFSGLAILVNRKIGLNPFIFICIA TAGTILIDLVNASYLQKQSILGYDPIVGARFYGIGNEYMGVLIGSLIFGTTAAVQYCPKNRRILILLSGLVYLFTVYAMA APNMGTNVGGTIAATAALLVTFLLLMGVRFRFRTILMVGCLVVLAVSGFIAFDLTRPPDLRSHMGTTASLLLKDPNYALE IIQRKWSMNMKLLRYTVWSRVLLASLGILALLFYRPQGVMKNLRVKYPYLFKGFIGVLTGALVAFAFNDSGVVAAATTMI FGAPPLVYLVLSEQRPKNKHRII
Sequences:
>Translated_743_residues MPYSFWQKVIASLLFVCVTLSFVHIATAEVSTGKAERVILVVIDKLTLQDYEEAGLENVKKLTNRGALGLLNNNTGAGIY SEHTYPTIGGGAHLIGTGDALNGFNPEEETFDTKASNEYIRRTGFIAPKDSVIQLALGKLLRNNSELNYLATPGALGQAL QNAGKKTAVIGNSDTTGVHRRLITTISMNKQGVTDMGTVDHSILLQHQPVIGSYQTDFPKVLAKIEEYKEKGASLIVVET GDLTRLYEEKDKATDQAYQRQREDAKNRIDRFIGNLVGQMDFNKEVLLVMTPTPTIEAVKENKNLTPIFAVGPQFEPGSL LTSGTTKRDGIIMNTDIAPTILKYLGVQIVPEMSGRPFMTSSVKLAGNSLEHLLNLNKGLVSTYQARPPLQSAYVLVQLI VLFMGLYGIFFKKHMAEMIKPFLLLVMSVPLVELVMPLLPNTSVAIMAVQLVVLTLAFSGLAILVNRKIGLNPFIFICIA TAGTILIDLVNASYLQKQSILGYDPIVGARFYGIGNEYMGVLIGSLIFGTTAAVQYCPKNRRILILLSGLVYLFTVYAMA APNMGTNVGGTIAATAALLVTFLLLMGVRFRFRTILMVGCLVVLAVSGFIAFDLTRPPDLRSHMGTTASLLLKDPNYALE IIQRKWSMNMKLLRYTVWSRVLLASLGILALLFYRPQGVMKNLRVKYPYLFKGFIGVLTGALVAFAFNDSGVVAAATTMI FGAPPLVYLVLSEQRPKNKHRII >Mature_742_residues PYSFWQKVIASLLFVCVTLSFVHIATAEVSTGKAERVILVVIDKLTLQDYEEAGLENVKKLTNRGALGLLNNNTGAGIYS EHTYPTIGGGAHLIGTGDALNGFNPEEETFDTKASNEYIRRTGFIAPKDSVIQLALGKLLRNNSELNYLATPGALGQALQ NAGKKTAVIGNSDTTGVHRRLITTISMNKQGVTDMGTVDHSILLQHQPVIGSYQTDFPKVLAKIEEYKEKGASLIVVETG DLTRLYEEKDKATDQAYQRQREDAKNRIDRFIGNLVGQMDFNKEVLLVMTPTPTIEAVKENKNLTPIFAVGPQFEPGSLL TSGTTKRDGIIMNTDIAPTILKYLGVQIVPEMSGRPFMTSSVKLAGNSLEHLLNLNKGLVSTYQARPPLQSAYVLVQLIV LFMGLYGIFFKKHMAEMIKPFLLLVMSVPLVELVMPLLPNTSVAIMAVQLVVLTLAFSGLAILVNRKIGLNPFIFICIAT AGTILIDLVNASYLQKQSILGYDPIVGARFYGIGNEYMGVLIGSLIFGTTAAVQYCPKNRRILILLSGLVYLFTVYAMAA PNMGTNVGGTIAATAALLVTFLLLMGVRFRFRTILMVGCLVVLAVSGFIAFDLTRPPDLRSHMGTTASLLLKDPNYALEI IQRKWSMNMKLLRYTVWSRVLLASLGILALLFYRPQGVMKNLRVKYPYLFKGFIGVLTGALVAFAFNDSGVVAAATTMIF GAPPLVYLVLSEQRPKNKHRII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81362; Mature: 81231
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSFWQKVIASLLFVCVTLSFVHIATAEVSTGKAERVILVVIDKLTLQDYEEAGLENVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH KLTNRGALGLLNNNTGAGIYSEHTYPTIGGGAHLIGTGDALNGFNPEEETFDTKASNEYI HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHH RRTGFIAPKDSVIQLALGKLLRNNSELNYLATPGALGQALQNAGKKTAVIGNSDTTGVHR HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCHHHH RLITTISMNKQGVTDMGTVDHSILLQHQPVIGSYQTDFPKVLAKIEEYKEKGASLIVVET HHHHHEECCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC GDLTRLYEEKDKATDQAYQRQREDAKNRIDRFIGNLVGQMDFNKEVLLVMTPTPTIEAVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH ENKNLTPIFAVGPQFEPGSLLTSGTTKRDGIIMNTDIAPTILKYLGVQIVPEMSGRPFMT CCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCHHHHHHHHCCCEEEECCCCCCEEC SSVKLAGNSLEHLLNLNKGLVSTYQARPPLQSAYVLVQLIVLFMGLYGIFFKKHMAEMIK CCHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLLLVMSVPLVELVMPLLPNTSVAIMAVQLVVLTLAFSGLAILVNRKIGLNPFIFICIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHEEHHHH TAGTILIDLVNASYLQKQSILGYDPIVGARFYGIGNEYMGVLIGSLIFGTTAAVQYCPKN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC RRILILLSGLVYLFTVYAMAAPNMGTNVGGTIAATAALLVTFLLLMGVRFRFRTILMVGC CEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVLAVSGFIAFDLTRPPDLRSHMGTTASLLLKDPNYALEIIQRKWSMNMKLLRYTVWSR HHHHHHHHHHEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHH VLLASLGILALLFYRPQGVMKNLRVKYPYLFKGFIGVLTGALVAFAFNDSGVVAAATTMI HHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH FGAPPLVYLVLSEQRPKNKHRII CCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure PYSFWQKVIASLLFVCVTLSFVHIATAEVSTGKAERVILVVIDKLTLQDYEEAGLENVK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHH KLTNRGALGLLNNNTGAGIYSEHTYPTIGGGAHLIGTGDALNGFNPEEETFDTKASNEYI HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCHHHHH RRTGFIAPKDSVIQLALGKLLRNNSELNYLATPGALGQALQNAGKKTAVIGNSDTTGVHR HHHCCCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCHHHH RLITTISMNKQGVTDMGTVDHSILLQHQPVIGSYQTDFPKVLAKIEEYKEKGASLIVVET HHHHHEECCCCCCCCCCCCCHHHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEC GDLTRLYEEKDKATDQAYQRQREDAKNRIDRFIGNLVGQMDFNKEVLLVMTPTPTIEAVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHH ENKNLTPIFAVGPQFEPGSLLTSGTTKRDGIIMNTDIAPTILKYLGVQIVPEMSGRPFMT CCCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCHHHHHHHHCCCEEEECCCCCCEEC SSVKLAGNSLEHLLNLNKGLVSTYQARPPLQSAYVLVQLIVLFMGLYGIFFKKHMAEMIK CCHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PFLLLVMSVPLVELVMPLLPNTSVAIMAVQLVVLTLAFSGLAILVNRKIGLNPFIFICIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHEEHHHH TAGTILIDLVNASYLQKQSILGYDPIVGARFYGIGNEYMGVLIGSLIFGTTAAVQYCPKN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCC RRILILLSGLVYLFTVYAMAAPNMGTNVGGTIAATAALLVTFLLLMGVRFRFRTILMVGC CEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVLAVSGFIAFDLTRPPDLRSHMGTTASLLLKDPNYALEIIQRKWSMNMKLLRYTVWSR HHHHHHHHHHEEECCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHH VLLASLGILALLFYRPQGVMKNLRVKYPYLFKGFIGVLTGALVAFAFNDSGVVAAATTMI HHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHH FGAPPLVYLVLSEQRPKNKHRII CCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA