Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is 134300016

Identifier: 134300016

GI number: 134300016

Start: 2374167

End: 2374835

Strand: Reverse

Name: 134300016

Synonym: Dred_2170

Alternate gene names: NA

Gene position: 2374835-2374167 (Counterclockwise)

Preceding gene: 134300018

Following gene: 134300015

Centisome position: 65.82

GC content: 36.92

Gene sequence:

>669_bases
ATGAAAGTAAAAGTTTTTATAAAAAATAAAGATGTTTACGATTTACAGATTTTAGATGAGACTGCTTCTGTACAGGATTA
TTTAGATGCTATCAATAAATTTATCGATGAAAACACGAATCCACCTTGTCGAGGCTGTGATGAATGCTGTTGGGAAAGAA
TTCCCCTTACCAGTATTGATGTACTAAACTATATTAATCAGTTAGGGGGAGCACTGGTCCTGGATAATGAATGGCCTCTA
TTGGATTTCTTAGATCAGTATACCTATATTTATGCTGAAGGTGGCGCTGTGGATATTAGTCTGGGCTTTACCCAGGAGGG
TGCTTGCCATTTCCTTGATCAGGAGCAGCATATCTGTGGTAGTTATACTGCCAGATCCCTGGTTTGTCAGAGTTTTATTT
GTATGGAAAGTACTAAGTCTGCCCAGGATTTTCGTTCGGAATTGGTAAATACAGGTATGGATGAATTGGTTCGCTTATGG
ATGAGCCAGTGTAAAGACGCTGGTATTAGATTATTTTACCACGAAGAGTACCAAGCAAGCCCTCAAGGGGAAGATTATCC
TGAAAATGGTTTTACCGGTAAAAAAACATACAAAGATGTGCTGCTAAAAGAGGTTTGTAGTTTAGAAGTATGGAATAATA
TATATAAAGAAAATTCTCAAAAATTATAA

Upstream 100 bases:

>100_bases
CTTTTTTTTATTTCCTGTCAATTTTGTTTGAAACCTATCTGAGAGGTTATATATAAAAAACAAAAAGTTAAAATAATATT
TTTGTAAAAGGGAGAGCGTT

Downstream 100 bases:

>100_bases
CGGGTTAAAAAATTGAAGCAAGGAAATACTATCCATATGATTACTGATATTAATACCTACCGCCATAAACAAAAAATAAC
TAGGATTAATGAGCTGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL
LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW
MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL

Sequences:

>Translated_222_residues
MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL
LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW
MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL
>Mature_222_residues
MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSIDVLNYINQLGGALVLDNEWPL
LDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICGSYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLW
MSQCKDAGIRLFYHEEYQASPQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25475; Mature: 25475

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSID
CEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHH
VLNYINQLGGALVLDNEWPLLDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICG
HHHHHHHHCCEEEECCCCCHHHHHHHCEEEEECCCEEEEEECCCCCCCHHHCCCHHHHHH
SYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLWMSQCKDAGIRLFYHEEYQAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
PQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKVKVFIKNKDVYDLQILDETASVQDYLDAINKFIDENTNPPCRGCDECCWERIPLTSID
CEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHH
VLNYINQLGGALVLDNEWPLLDFLDQYTYIYAEGGAVDISLGFTQEGACHFLDQEQHICG
HHHHHHHHCCEEEECCCCCHHHHHHHCEEEEECCCEEEEEECCCCCCCHHHCCCHHHHHH
SYTARSLVCQSFICMESTKSAQDFRSELVNTGMDELVRLWMSQCKDAGIRLFYHEEYQAS
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCC
PQGEDYPENGFTGKKTYKDVLLKEVCSLEVWNNIYKENSQKL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA