Definition Desulfotomaculum reducens MI-1 chromosome, complete genome.
Accession NC_009253
Length 3,608,104

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The map label for this gene is ybjQ [C]

Identifier: 134300001

GI number: 134300001

Start: 2359842

End: 2360153

Strand: Reverse

Name: ybjQ [C]

Synonym: Dred_2155

Alternate gene names: 134300001

Gene position: 2360153-2359842 (Counterclockwise)

Preceding gene: 134300002

Following gene: 134299999

Centisome position: 65.41

GC content: 50.32

Gene sequence:

>312_bases
ATGATTATCACAACAACAGGAATCATTGAGGGGAAACCCATCCGGCAGTATTTTGGCTTAGTTAATGGAGAAGCCATTAT
GGGTGCCAATGTGGTGCGGGACATCTTTGCCAGTATCACTGATATTGTTGGTGGACGTAGTGGTGCATATGAAAGCAAAC
TGGCCCATGCCCGGGAAATTGCCCTGGAAGAAATGACAGAACAGGCCCGCCGCATGGGGGCCAATGCCATTGTGGGTGTG
GACCTGGACTACGAAGTGATCCGGGAGGGTATGCTAATGGTTTCTGCCAGCGGTACCGCTGTACAAATCTAA

Upstream 100 bases:

>100_bases
AAGGAATAAATTTTACAAAAGGATAGGTCAGGCCCTATCCTTTTGTTGTATAAAAATAATCCATATTACGAAAAATATAT
GTATCAGGAGGAAAGATGTT

Downstream 100 bases:

>100_bases
TAGGTATGGATGTAAAAAGCACGGGCATTGGCCGTGCTTTTTAATAATATCCCACTTTATTTAAGTTCGTAGGTTCTAAA
GGGTGGGCTAGACAAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV
DLDYEVIREGMLMVSASGTAVQI

Sequences:

>Translated_103_residues
MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV
DLDYEVIREGMLMVSASGTAVQI
>Mature_103_residues
MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREIALEEMTEQARRMGANAIVGV
DLDYEVIREGMLMVSASGTAVQI

Specific function: Unknown

COG id: COG0393

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0145 family

Homologues:

Organism=Escherichia coli, GI1787091, Length=104, Percent_Identity=59.6153846153846, Blast_Score=123, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2155_DESRM (A4J6G9)

Other databases:

- EMBL:   CP000612
- RefSeq:   YP_001113497.1
- ProteinModelPortal:   A4J6G9
- SMR:   A4J6G9
- STRING:   A4J6G9
- GeneID:   4958265
- GenomeReviews:   CP000612_GR
- KEGG:   drm:Dred_2155
- eggNOG:   COG0393
- HOGENOM:   HBG339160
- OMA:   DFEISMP
- PhylomeDB:   A4J6G9
- BioCyc:   DRED349161:DRED_2155-MONOMER
- HAMAP:   MF_00338
- InterPro:   IPR002765
- Gene3D:   G3DSA:3.30.110.70

Pfam domain/function: PF01906 DUF74

EC number: NA

Molecular weight: Translated: 11031; Mature: 11031

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREI
CEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALEEMTEQARRMGANAIVGVDLDYEVIREGMLMVSASGTAVQI
HHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEECCCCEEEC
>Mature Secondary Structure
MIITTTGIIEGKPIRQYFGLVNGEAIMGANVVRDIFASITDIVGGRSGAYESKLAHAREI
CEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALEEMTEQARRMGANAIVGVDLDYEVIREGMLMVSASGTAVQI
HHHHHHHHHHHCCCCEEEECCCCHHHHHCCEEEEECCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA