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The map label for this gene is ykvT [H]

Identifier: 134299948

GI number: 134299948

Start: 2300710

End: 2301429

Strand: Reverse

Name: ykvT [H]

Synonym: Dred_2102

Alternate gene names: 134299948

Gene position: 2301429-2300710 (Counterclockwise)

Preceding gene: 134299949

Following gene: 134299946

Centisome position: 63.78

GC content: 45.42

Gene sequence:

>720_bases
ATGAACAAGAAGTACCGTAAGATCGCCACGTTGATGGCGGTTTTGGTAGCAGTTACCTCCAGCTTTATGGTTGCAACAGT
AGCTACGGGGGCGGCTGGCGACGGTGCAGGCGGTTTAGAGTGTGAAGGTTCCGATCCAGACCGATCTAGTTCTGAGGTTT
ATTACACAGTCCAACCGGGGGATACCCTCTATCAGGTGTGTAGAGACTATCATGTATCCTTAGGGTCATTGATGCGTGCC
AATAATTTAAAGAACACGACAATATATCCCGATCAAAGGCTTGTCATACCGACAGTCAGCATTTCTTCCTATGGTATGGT
TTTATCTCGAGGGGATGTTTCCCGAGAGGATATTAAGCTTTTGGCCAGGCTTATTCATGCAGAAGCCAGAGGAGAAACCT
TTGAGGGTAAGGTGGCTGTAGGAGCGGTTATTCTTAATCGTTTAGTGAGTCCGGGTTTTCCAAAGAGCATTCGGGAAATT
ATCTTAGAGAACAACAACCTTGTGTATCAGTTTTCGCCGGTGCAGGACGGTTCCATTAATCTTGAACCTGATGAAGATTC
TATGAAAGCCGCGCTGGAAGCCCTTATGGGGCGCGACCCTACCGGCGGAGCCTTATTCTTTTATAATCCGATTGTAGCAA
CAGATAAATGGATAAAAACACTTCCTGTAGTTACCCGAATTGGTAATCATGTATTTGCCACTAAAGCTACAAAAATATAA

Upstream 100 bases:

>100_bases
ATAGTATGCCATAAAAAACGCCATTTAGGCGTTTTTTGTTCTCTATGTATATTCTTAGTAAAATTGTACAAACTATGTTT
TGGGTAAGAAAGGAGGAATT

Downstream 100 bases:

>100_bases
TGCTGCAAAGGGCCAGCTCTGAAAGGGGTTGGCCCTTTGTCGGTTTAATAAGTTGATTTCAGATTTTGTAACCGTGAATT
CACCGTGTACCAATCAATGT

Product: cell wall hydrolase SleB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNKKYRKIATLMAVLVAVTSSFMVATVATGAAGDGAGGLECEGSDPDRSSSEVYYTVQPGDTLYQVCRDYHVSLGSLMRA
NNLKNTTIYPDQRLVIPTVSISSYGMVLSRGDVSREDIKLLARLIHAEARGETFEGKVAVGAVILNRLVSPGFPKSIREI
ILENNNLVYQFSPVQDGSINLEPDEDSMKAALEALMGRDPTGGALFFYNPIVATDKWIKTLPVVTRIGNHVFATKATKI

Sequences:

>Translated_239_residues
MNKKYRKIATLMAVLVAVTSSFMVATVATGAAGDGAGGLECEGSDPDRSSSEVYYTVQPGDTLYQVCRDYHVSLGSLMRA
NNLKNTTIYPDQRLVIPTVSISSYGMVLSRGDVSREDIKLLARLIHAEARGETFEGKVAVGAVILNRLVSPGFPKSIREI
ILENNNLVYQFSPVQDGSINLEPDEDSMKAALEALMGRDPTGGALFFYNPIVATDKWIKTLPVVTRIGNHVFATKATKI
>Mature_239_residues
MNKKYRKIATLMAVLVAVTSSFMVATVATGAAGDGAGGLECEGSDPDRSSSEVYYTVQPGDTLYQVCRDYHVSLGSLMRA
NNLKNTTIYPDQRLVIPTVSISSYGMVLSRGDVSREDIKLLARLIHAEARGETFEGKVAVGAVILNRLVSPGFPKSIREI
ILENNNLVYQFSPVQDGSINLEPDEDSMKAALEALMGRDPTGGALFFYNPIVATDKWIKTLPVVTRIGNHVFATKATKI

Specific function: Unknown

COG id: COG3773

COG function: function code M; Cell wall hydrolyses involved in spore germination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011105 [H]

Pfam domain/function: PF07486 Hydrolase_2 [H]

EC number: NA

Molecular weight: Translated: 25933; Mature: 25933

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKYRKIATLMAVLVAVTSSFMVATVATGAAGDGAGGLECEGSDPDRSSSEVYYTVQPG
CCHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DTLYQVCRDYHVSLGSLMRANNLKNTTIYPDQRLVIPTVSISSYGMVLSRGDVSREDIKL
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCCCEEEECCCCCHHHHHH
LARLIHAEARGETFEGKVAVGAVILNRLVSPGFPKSIREIILENNNLVYQFSPVQDGSIN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEE
LEPDEDSMKAALEALMGRDPTGGALFFYNPIVATDKWIKTLPVVTRIGNHVFATKATKI
CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHCHHHHHHHHHHHHHCCEEEEECCCCC
>Mature Secondary Structure
MNKKYRKIATLMAVLVAVTSSFMVATVATGAAGDGAGGLECEGSDPDRSSSEVYYTVQPG
CCHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DTLYQVCRDYHVSLGSLMRANNLKNTTIYPDQRLVIPTVSISSYGMVLSRGDVSREDIKL
HHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCEEEEEEEECCCCCEEEECCCCCHHHHHH
LARLIHAEARGETFEGKVAVGAVILNRLVSPGFPKSIREIILENNNLVYQFSPVQDGSIN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEE
LEPDEDSMKAALEALMGRDPTGGALFFYNPIVATDKWIKTLPVVTRIGNHVFATKATKI
CCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHCHHHHHHHHHHHHHCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]