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The map label for this gene is ybcI [H]

Identifier: 134299836

GI number: 134299836

Start: 2185793

End: 2186158

Strand: Reverse

Name: ybcI [H]

Synonym: Dred_1989

Alternate gene names: 134299836

Gene position: 2186158-2185793 (Counterclockwise)

Preceding gene: 134299837

Following gene: 134299835

Centisome position: 60.59

GC content: 36.34

Gene sequence:

>366_bases
ATGAATCTGCAATTATTAGAAAAACAAATCTGTGAGGCCTTTATAAAATTTCAAAGGGAGTTGGTTGGCCGGGGACCGGA
GATAACAAGGGCGATGATTTGTCGTGATATGGTTGTAGTTCGCTCAAAGGGAGTATTGACCAAAGAGGAAAAACACGTCA
GCACTAGTAAGAAGGGACGTGCCCTGGTAAAACAATTGAGAATGGAGCTAAGAGAATCTTACTTAGATAAAATAGAAAAA
ATTATTACAGATATTACTAATTGTCGGGTGATGAGCAGCCATGGAGATATAAGTATTCGGACAGGAGAACAAATAGAAGT
TTTTATTCTTAATCAAGATTTTGAGAAAAAGTTAAAACAAAACTGA

Upstream 100 bases:

>100_bases
TTGATATGGATTGTGTCAAAAGTAACAAGCCTACATTAAAAAAACAGTTATTTAAGCACCTTTAAAATAGTTTATGAACT
GCTTATAAAGGGGGAGGGTC

Downstream 100 bases:

>100_bases
CTGGCTAATTGCTTTAAGGCATACAGCGAGTCGAAAATTGGAATGTTGGTAGGCGTGATACAGAGCCTCTAAGGCTAGGT
ATAAAGTAAACCAACGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MNLQLLEKQICEAFIKFQRELVGRGPEITRAMICRDMVVVRSKGVLTKEEKHVSTSKKGRALVKQLRMELRESYLDKIEK
IITDITNCRVMSSHGDISIRTGEQIEVFILNQDFEKKLKQN

Sequences:

>Translated_121_residues
MNLQLLEKQICEAFIKFQRELVGRGPEITRAMICRDMVVVRSKGVLTKEEKHVSTSKKGRALVKQLRMELRESYLDKIEK
IITDITNCRVMSSHGDISIRTGEQIEVFILNQDFEKKLKQN
>Mature_121_residues
MNLQLLEKQICEAFIKFQRELVGRGPEITRAMICRDMVVVRSKGVLTKEEKHVSTSKKGRALVKQLRMELRESYLDKIEK
IITDITNCRVMSSHGDISIRTGEQIEVFILNQDFEKKLKQN

Specific function: Unknown

COG id: COG5609

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018745 [H]

Pfam domain/function: PF10057 DUF2294 [H]

EC number: NA

Molecular weight: Translated: 14080; Mature: 14080

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLQLLEKQICEAFIKFQRELVGRGPEITRAMICRDMVVVRSKGVLTKEEKHVSTSKKGR
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHH
ALVKQLRMELRESYLDKIEKIITDITNCRVMSSHGDISIRTGEQIEVFILNQDFEKKLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCEEEEEEECCCHHHHHCC
N
C
>Mature Secondary Structure
MNLQLLEKQICEAFIKFQRELVGRGPEITRAMICRDMVVVRSKGVLTKEEKHVSTSKKGR
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHH
ALVKQLRMELRESYLDKIEKIITDITNCRVMSSHGDISIRTGEQIEVFILNQDFEKKLKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCEEEEEEECCCHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]