| Definition | Desulfotomaculum reducens MI-1 chromosome, complete genome. |
|---|---|
| Accession | NC_009253 |
| Length | 3,608,104 |
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The map label for this gene is ispG [H]
Identifier: 134299815
GI number: 134299815
Start: 2163483
End: 2164532
Strand: Reverse
Name: ispG [H]
Synonym: Dred_1968
Alternate gene names: 134299815
Gene position: 2164532-2163483 (Counterclockwise)
Preceding gene: 134299816
Following gene: 134299814
Centisome position: 59.99
GC content: 44.67
Gene sequence:
>1050_bases ATGAATTCTAAAATAACACGACCAATTATGGTGGGTAAAGTACAGATTGGCGGGGGTGGACCTGTTGTTGTACAATCCAT GACAAATACGGATACCAGGAATGCCCTTGCTACAATTGATCAAATTAACGAGTTATCTGCGGTGGGCTGTGAAGTAATCA GAGTAGCTGTGCCGGACAAAACAGCTGCCGAAGCTTTACCAACTATTAAAGCAGGTATTAGTATACCCCTAATTGCTGAT ATTCACTTTGATTATCGACTGGCCCTATTGGCTATAGAGGCTGGTGTTGATGGTTTAAGAATCAACCCTGGCAATATAGG TGGAAAGGAAAAAGTACAAGAAGTTGTAGCAGCGGCCCGGGAACGAAGAGTTCCAATACGCATTGGTGTAAATGCTGGTT CCCTGGAAAGGGAATTACTAACTAAATATGGCGGAGTGACGCCGGATGCGATGGTGGAAAGTGCCTTAAACCATATTAGG CTATTAGAGGAATTAAACTACAACGAAATAAAGGTGTCACTAAAAGCTTCCAATATTCCTCTTATGCTGGAAGCTTACCG TAAACTATCTGCCAGGGTAGAATACCCAATGCATGTGGGTGTAACCGAAGCAGGTACGGTAAAAAGTGGTACCATAAAAT CTGCTGTGGGAATCGGAGCCCTGCTTGCTGAAGGGATAGGTGATACCATTCGAGTATCTCTCACCGGTGATCCTAAATAC GAAGTGAATGTAGCATGGGAAATATTAAAGGCCTTGGGACTACGCAGGCGGGGAGCTGAGCTGATTTCCTGCCCTACATG TGGGAGAACGCAAATTAATCTGATAAAATTGGCTGAAGAGGTTGAGCAGAGAATAGCTACAGTGGACAAACCCATTAAAA TTGCTGTGATGGGTTGTGCTGTCAATGGGCCCGGCGAAGCAAGGGAAGCAGATATAGGGATAGCAGGTGGCAAAGGGGTG GGGCTAATCTTTCGCAAGGGAGAAATAATCCGACAGGTTCCCGAAGACCAACTGTTAGAAGAGTTGCTGAAAGAAATAGA GAATCTTTAA
Upstream 100 bases:
>100_bases TTCATCTTATCGGTTTTGGACTATTATTACTATTGATGGTGGTAATCACATATAACGATATTGTTAATTTAATGTTTGGT AATCGTTAGCGGAGGATAAC
Downstream 100 bases:
>100_bases CTATTCATGAACATCTATCTAATGTCGCAATATGACTATCTAAATATATCAGGAGGATCTTAATATGCGTGTTAGTCAAA TGCTCGTTCCAACTTTAAGG
Product: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
Products: NA
Alternate protein names: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase [H]
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MNSKITRPIMVGKVQIGGGGPVVVQSMTNTDTRNALATIDQINELSAVGCEVIRVAVPDKTAAEALPTIKAGISIPLIAD IHFDYRLALLAIEAGVDGLRINPGNIGGKEKVQEVVAAARERRVPIRIGVNAGSLERELLTKYGGVTPDAMVESALNHIR LLEELNYNEIKVSLKASNIPLMLEAYRKLSARVEYPMHVGVTEAGTVKSGTIKSAVGIGALLAEGIGDTIRVSLTGDPKY EVNVAWEILKALGLRRRGAELISCPTCGRTQINLIKLAEEVEQRIATVDKPIKIAVMGCAVNGPGEAREADIGIAGGKGV GLIFRKGEIIRQVPEDQLLEELLKEIENL
Sequences:
>Translated_349_residues MNSKITRPIMVGKVQIGGGGPVVVQSMTNTDTRNALATIDQINELSAVGCEVIRVAVPDKTAAEALPTIKAGISIPLIAD IHFDYRLALLAIEAGVDGLRINPGNIGGKEKVQEVVAAARERRVPIRIGVNAGSLERELLTKYGGVTPDAMVESALNHIR LLEELNYNEIKVSLKASNIPLMLEAYRKLSARVEYPMHVGVTEAGTVKSGTIKSAVGIGALLAEGIGDTIRVSLTGDPKY EVNVAWEILKALGLRRRGAELISCPTCGRTQINLIKLAEEVEQRIATVDKPIKIAVMGCAVNGPGEAREADIGIAGGKGV GLIFRKGEIIRQVPEDQLLEELLKEIENL >Mature_349_residues MNSKITRPIMVGKVQIGGGGPVVVQSMTNTDTRNALATIDQINELSAVGCEVIRVAVPDKTAAEALPTIKAGISIPLIAD IHFDYRLALLAIEAGVDGLRINPGNIGGKEKVQEVVAAARERRVPIRIGVNAGSLERELLTKYGGVTPDAMVESALNHIR LLEELNYNEIKVSLKASNIPLMLEAYRKLSARVEYPMHVGVTEAGTVKSGTIKSAVGIGALLAEGIGDTIRVSLTGDPKY EVNVAWEILKALGLRRRGAELISCPTCGRTQINLIKLAEEVEQRIATVDKPIKIAVMGCAVNGPGEAREADIGIAGGKGV GLIFRKGEIIRQVPEDQLLEELLKEIENL
Specific function: Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate [H]
COG id: COG0821
COG function: function code I; Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ispG family [H]
Homologues:
Organism=Escherichia coli, GI1788863, Length=339, Percent_Identity=48.6725663716814, Blast_Score=347, Evalue=7e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011005 - InterPro: IPR016425 - InterPro: IPR004588 [H]
Pfam domain/function: PF04551 GcpE [H]
EC number: =1.17.7.1 [H]
Molecular weight: Translated: 37283; Mature: 37283
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKITRPIMVGKVQIGGGGPVVVQSMTNTDTRNALATIDQINELSAVGCEVIRVAVPDK CCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCC TAAEALPTIKAGISIPLIADIHFDYRLALLAIEAGVDGLRINPGNIGGKEKVQEVVAAAR HHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH ERRVPIRIGVNAGSLERELLTKYGGVTPDAMVESALNHIRLLEELNYNEIKVSLKASNIP HCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC LMLEAYRKLSARVEYPMHVGVTEAGTVKSGTIKSAVGIGALLAEGIGDTIRVSLTGDPKY HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCE EVNVAWEILKALGLRRRGAELISCPTCGRTQINLIKLAEEVEQRIATVDKPIKIAVMGCA EEHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE VNGPGEAREADIGIAGGKGVGLIFRKGEIIRQVPEDQLLEELLKEIENL ECCCCCCCCCCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MNSKITRPIMVGKVQIGGGGPVVVQSMTNTDTRNALATIDQINELSAVGCEVIRVAVPDK CCCCCCCCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCC TAAEALPTIKAGISIPLIADIHFDYRLALLAIEAGVDGLRINPGNIGGKEKVQEVVAAAR HHHHHCCHHHCCCCCEEEEEECCCEEEEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHH ERRVPIRIGVNAGSLERELLTKYGGVTPDAMVESALNHIRLLEELNYNEIKVSLKASNIP HCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC LMLEAYRKLSARVEYPMHVGVTEAGTVKSGTIKSAVGIGALLAEGIGDTIRVSLTGDPKY HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCE EVNVAWEILKALGLRRRGAELISCPTCGRTQINLIKLAEEVEQRIATVDKPIKIAVMGCA EEHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE VNGPGEAREADIGIAGGKGVGLIFRKGEIIRQVPEDQLLEELLKEIENL ECCCCCCCCCCEEEECCCCEEEEEECCHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA